##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547255_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1190132 Sequences flagged as poor quality 0 Sequence length 50 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.381429118786823 31.0 31.0 33.0 30.0 34.0 2 31.79479251041061 31.0 31.0 34.0 30.0 34.0 3 31.926556886126917 31.0 31.0 34.0 30.0 34.0 4 35.60639660138539 37.0 35.0 37.0 33.0 37.0 5 35.47494899725409 37.0 35.0 37.0 33.0 37.0 6 35.52263110310453 37.0 35.0 37.0 33.0 37.0 7 35.94841496573489 37.0 35.0 37.0 35.0 37.0 8 35.931126967428824 37.0 35.0 37.0 35.0 37.0 9 37.61243542733075 39.0 37.0 39.0 35.0 39.0 10 37.126049043299396 39.0 37.0 39.0 33.0 39.0 11 36.89960441362807 39.0 37.0 39.0 33.0 39.0 12 36.46061781382233 39.0 35.0 39.0 32.0 39.0 13 36.35953658921868 39.0 35.0 39.0 32.0 39.0 14 37.39218422830409 39.0 35.0 41.0 32.0 41.0 15 37.54297254422198 39.0 35.0 41.0 32.0 41.0 16 37.59963852749107 39.0 35.0 41.0 33.0 41.0 17 37.50193760019897 39.0 35.0 41.0 32.0 41.0 18 37.42527467541416 39.0 36.0 41.0 32.0 41.0 19 37.36932373887939 39.0 35.0 41.0 32.0 41.0 20 37.18178487764382 39.0 35.0 41.0 32.0 41.0 21 37.05409063868546 39.0 35.0 41.0 32.0 41.0 22 37.026493699858506 39.0 35.0 41.0 32.0 41.0 23 36.94090487441729 38.0 35.0 41.0 32.0 41.0 24 36.837199571140005 38.0 35.0 41.0 32.0 41.0 25 36.641627987483744 38.0 35.0 40.0 31.0 41.0 26 36.56366184591289 38.0 35.0 40.0 31.0 41.0 27 36.417983887501556 38.0 35.0 40.0 31.0 41.0 28 36.36857004097025 38.0 35.0 40.0 31.0 41.0 29 36.28830499474008 38.0 35.0 40.0 30.0 41.0 30 36.23688296760359 38.0 35.0 40.0 30.0 41.0 31 36.1041145015847 38.0 35.0 40.0 30.0 41.0 32 35.895556963429264 38.0 35.0 40.0 30.0 41.0 33 35.743982180127915 38.0 35.0 40.0 29.0 41.0 34 35.623646788759565 38.0 35.0 40.0 28.0 41.0 35 35.399352340748756 38.0 35.0 40.0 27.0 41.0 36 35.2621557944833 38.0 35.0 40.0 26.0 41.0 37 35.20069118383507 38.0 34.0 40.0 26.0 41.0 38 35.11102045823488 38.0 34.0 40.0 26.0 41.0 39 35.01853827978745 38.0 34.0 40.0 25.0 41.0 40 34.912339975733786 38.0 34.0 40.0 24.0 41.0 41 34.89710132993651 38.0 34.0 40.0 24.0 41.0 42 34.706484658844566 37.0 34.0 40.0 24.0 41.0 43 34.65228226784928 37.0 34.0 40.0 24.0 41.0 44 34.398913733938755 37.0 34.0 40.0 23.0 41.0 45 34.23876511176911 37.0 33.0 40.0 23.0 41.0 46 34.259598935244156 37.0 34.0 40.0 23.0 41.0 47 34.13821744142667 36.0 33.0 40.0 23.0 41.0 48 34.101573606961246 36.0 33.0 40.0 23.0 41.0 49 34.03419536656438 36.0 33.0 40.0 23.0 41.0 50 33.471615753546665 35.0 33.0 39.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 2.0 12 3.0 13 6.0 14 7.0 15 24.0 16 75.0 17 219.0 18 503.0 19 986.0 20 1698.0 21 2795.0 22 4352.0 23 6541.0 24 9745.0 25 14243.0 26 19160.0 27 22204.0 28 23680.0 29 26008.0 30 29657.0 31 35520.0 32 43672.0 33 55114.0 34 87845.0 35 141378.0 36 92975.0 37 117778.0 38 166883.0 39 287058.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.910493962014296 26.10861652320919 27.950260979454377 14.030628535322132 2 32.094003018152605 26.833830196986554 27.950260979454377 13.121905805406458 3 28.363240380058684 26.058033898760808 32.13341041161821 13.4453153095623 4 23.89323201123909 29.72829904582013 31.2725815287716 15.105887414169183 5 22.518846648943143 32.73519239882635 30.005663237355186 14.740297714875325 6 19.161571993694817 41.245004755774985 27.96093206467854 11.632491185851654 7 83.46435521437958 4.115677924801619 9.74505348986499 2.6749133709538104 8 81.71169248453113 3.7352159256284176 8.785328014035418 5.767763575805037 9 75.40844208877671 5.5666094181149655 13.809560620166502 5.215387872941825 10 40.32956008241103 24.082622767894655 18.41745285396914 17.17036429572518 11 31.879993143617686 24.185720575532798 26.674352088675878 17.259934192173638 12 28.491629499921018 20.081974100351893 30.297563631597168 21.12883276812992 13 21.061361260767715 28.91015450387016 32.60587901173987 17.422605223622252 14 16.78360047456921 32.18516937617004 31.00958549135726 20.021644657903494 15 15.385940383083557 23.453532885427837 42.68375272658831 18.476774004900296 16 16.604544705965388 21.112952176733337 40.04202895141043 22.24047416589084 17 15.733380835067035 23.930622821670198 31.23342620818531 29.102570135077453 18 19.30617780212615 23.162052612651372 35.00813355157243 22.52363603365005 19 23.213895601496304 28.809661449318224 27.54618815391906 20.430254795266407 20 24.468882443292003 24.686925483895905 26.966504555797172 23.87768751701492 21 20.18070264474865 31.021937062443495 27.950429028040585 20.846931264767267 22 20.190617511334878 25.77319154513953 26.191884597674882 27.84430634585071 23 18.52651638641764 30.662481136546198 24.811281437689264 25.999721039346895 24 19.242907509419123 25.53657913575973 33.580896908914305 21.63961644590684 25 19.781839325385757 26.196673982381785 30.354700150907632 23.66678654132483 26 17.83449230841621 28.82503789495619 29.818457112320313 23.522012684307285 27 20.477224375111334 27.0065001193145 27.67020801054001 24.846067495034163 28 19.00763948872898 26.753250899900177 33.76096096903537 20.478148642335473 29 18.990498532935842 23.49907405229 32.48152305794652 25.028904356827645 30 21.367377736251107 26.329852486951026 30.96740529621924 21.335364480578626 31 24.922529601758463 24.75851418162019 26.36724329738214 23.95171291923921 32 25.978714966070992 23.81618173446307 28.57195672412808 21.63314657533786 33 22.580184382908786 23.77349739356643 29.74779268182017 23.89852554170462 34 21.043043964871124 23.088699404771905 29.725862341320124 26.142394289036847 35 18.76296074721123 22.32433041040826 32.420689469739486 26.492019372641018 36 25.020081806051763 21.798170286993376 28.100916536989175 25.080831369965683 37 20.221202354024594 24.90236377141359 30.696006829494543 24.180427045067272 38 20.246997812007407 25.371723472690423 27.03607667048697 27.3452020448152 39 19.746297049402923 24.315454084084788 28.261907082575714 27.67634178393657 40 21.753469363062248 21.720615864458733 29.771487532475387 26.75442724000363 41 17.680559803450375 21.4762732201134 29.986421674234453 30.856745302201773 42 22.272571445856425 23.588055778686734 27.84909573055762 26.290277044899224 43 21.274110770906084 22.58211694165017 31.226872313323227 24.91689997412052 44 22.599005824563996 25.293076734345433 28.372146955127665 23.735770485962902 45 19.09578097219468 26.39295473107185 28.73815677588705 25.773107520846427 46 23.115167057099548 24.573240615326704 28.123014926075427 24.18857740149832 47 21.292932212561297 23.618724645669555 29.521095139026592 25.567248002742556 48 21.095055002302267 21.948657795941962 30.144303320976164 26.81198388077961 49 22.1582984072355 20.451765014300936 30.38511694501114 27.004819633452428 50 19.605136236988837 22.83847505990932 31.54238353392733 26.014005169174514 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1598.0 1 1534.0 2 1470.0 3 6243.0 4 11016.0 5 8088.0 6 5160.0 7 5779.5 8 6399.0 9 7181.0 10 7963.0 11 8357.0 12 8751.0 13 8721.0 14 8691.0 15 8489.0 16 8287.0 17 8077.0 18 7867.0 19 7459.5 20 7052.0 21 7032.0 22 7012.0 23 6964.0 24 6916.0 25 6930.5 26 6945.0 27 7272.0 28 7599.0 29 8619.5 30 9640.0 31 11394.0 32 13148.0 33 15251.0 34 17354.0 35 20085.0 36 22816.0 37 24311.0 38 25806.0 39 32027.5 40 38249.0 41 48725.0 42 59201.0 43 70565.5 44 81930.0 45 97365.5 46 112801.0 47 127980.0 48 143159.0 49 143355.5 50 143552.0 51 119536.5 52 95521.0 53 80976.5 54 66432.0 55 59594.5 56 52757.0 57 48111.0 58 43465.0 59 41076.0 60 38687.0 61 36397.0 62 34107.0 63 31117.0 64 28127.0 65 24091.5 66 20056.0 67 17002.5 68 13949.0 69 11901.5 70 9854.0 71 8638.5 72 7423.0 73 5978.5 74 4534.0 75 3258.0 76 1982.0 77 1679.5 78 1377.0 79 1111.5 80 846.0 81 600.5 82 355.0 83 274.5 84 194.0 85 119.0 86 44.0 87 34.5 88 25.0 89 15.0 90 5.0 91 5.0 92 5.0 93 4.5 94 4.0 95 2.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1190132.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.601471602518494 #Duplication Level Percentage of deduplicated Percentage of total 1 78.14357014453131 25.475953829863496 2 7.993279354046534 5.211853397438909 3 3.0106924420483896 2.944590124600728 4 1.6389368581760173 2.137270137605852 5 1.0946617737348274 1.7843792365389248 6 0.8017133756522838 1.5682221509812304 7 0.6446006931641937 1.471045183520934 8 0.5366098459376715 1.3995416523175055 9 0.4347909638655713 1.275734273534556 >10 4.995277735650718 37.095666966932015 >50 0.6333386402777486 13.291975361180668 >100 0.06682953076123474 3.5543880132057346 >500 0.002331262699180437 0.5244179033288572 >1k 0.0031083502655739155 1.6848086295191675 >5k 2.590291887978263E-4 0.5801531394314411 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6870 0.577246893621884 No Hit CTGTCTCTTATACACATCTGACGCTTGTCCCTTCGTATGCCGTCTTCTGC 2947 0.24761959177637438 No Hit GCTGTCTCTTATACACATCTGACGCTTGTCCCTTCGTATGCCGTCTTCTG 2341 0.19670087015557935 No Hit CCTGTCTCTTATACACATCTGACGCTTGTCCCTTCGTATGCCGTCTTCTG 2049 0.17216577656932172 No Hit AAGAGCTGTCTCTTATACACATCTGACGCTTGTCCCTTCGTATGCCGTCT 1743 0.14645434287961337 No Hit GAGAGCTGTCTCTTATACACATCTGACGCTTGTCCCTTCGTATGCCGTCT 1645 0.13821996215545837 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 1587 0.1333465531554483 No Hit GAGCTGTCTCTTATACACATCTGACGCTTGTCCCTTCGTATGCCGTCTTC 1587 0.1333465531554483 No Hit TAGAGCTGTCTCTTATACACATCTGACGCTTGTCCCTTCGTATGCCGTCT 1350 0.11343279568988986 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1303 0.10948365391401964 No Hit AAGCTGTCTCTTATACACATCTGACGCTTGTCCCTTCGTATGCCGTCTTC 1282 0.10771914375884356 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.2617356730177829 0.0 2 0.0 0.0 0.0 0.841167198260361 0.0 3 0.0 0.0 0.0 1.2575075705888086 0.0 4 0.0 0.0 0.0 1.9678489444868301 0.0 5 0.0 0.0 0.0 3.118981760006453 0.0 6 0.0 0.0 0.0 5.22849566266599 0.0 7 0.0 0.0 0.0 6.270817018616422 0.0 8 0.0 0.0 0.0 9.402402422588418 0.0 9 0.0 0.0 0.0 11.058101118195292 0.0 10 0.0 0.0 0.0 13.52673484957971 0.0 11 0.0 0.0 0.0 15.009595574272433 0.0 12 0.0 0.0 0.0 16.302897493723385 0.0 13 0.0 0.0 0.0 16.9876114582248 0.0 14 0.0 0.0 0.0 17.288502451828872 0.0 15 0.0 0.0 0.0 17.591494052760535 0.0 16 0.0 0.0 0.0 18.161682905761715 0.0 17 0.0 0.0 0.0 18.753718074969836 0.0 18 0.0 0.0 0.0 19.668154456816556 0.0 19 0.0 0.0 0.0 20.02761038271385 0.0 20 0.0 0.0 0.0 20.498818618438964 0.0 21 0.0 0.0 0.0 20.95246577690542 0.0 22 0.0 0.0 0.0 21.412414757354647 0.0 23 0.0 0.0 0.0 21.944540605579885 0.0 24 0.0 0.0 0.0 22.34222758483933 0.0 25 0.0 0.0 0.0 22.648580157495136 0.0 26 0.0 0.0 0.0 22.938127871530217 0.0 27 0.0 0.0 0.0 23.271368217979184 0.0 28 0.0 0.0 0.0 23.57217518729015 0.0 29 0.0 0.0 0.0 23.90071017332531 0.0 30 0.0 0.0 0.0 24.312177136653748 0.0 31 0.0 0.0 0.0 24.644073094413056 0.0 32 0.0 0.0 0.0 24.93832616886194 0.0 33 0.0 0.0 0.0 25.244594717224643 0.0 34 0.0 0.0 0.0 25.559181670604605 0.0 35 0.0 0.0 0.0 25.907210292639807 0.0 36 8.402429310362212E-5 0.0 0.0 26.21919249293356 0.0 37 8.402429310362212E-5 0.0 0.0 26.538568831020424 0.0 38 8.402429310362212E-5 0.0 0.0 26.85836529057281 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATAGCG 55 1.8189894E-12 44.000004 1 TATAACG 55 1.8189894E-12 44.000004 1 ACGCATT 20 7.856596E-4 44.0 15 CCGGATA 20 7.856596E-4 44.0 20 TATCTCG 20 7.856596E-4 44.0 1 CTCGCTA 20 7.856596E-4 44.0 12 GCGTATG 35 1.4461511E-7 44.0 1 TCACGAC 130 0.0 43.999996 25 CGTTTTT 5545 0.0 42.651035 1 CAACCCG 80 0.0 41.25 23 CGAATAT 75 0.0 41.066666 14 ATAACGG 145 0.0 40.965515 2 CGGTCTA 135 0.0 40.74074 31 ATAGCGG 190 0.0 40.526314 2 CGTTTAT 115 0.0 40.173916 39 TCGTTTA 110 0.0 40.000004 38 CGCATCG 110 0.0 40.000004 21 TACGGGA 265 0.0 39.849056 4 GCAATAG 100 0.0 39.6 1 TAGGGAC 935 0.0 39.294117 5 >>END_MODULE