##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547231_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1802763 Sequences flagged as poor quality 0 Sequence length 50 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.447368844379433 31.0 31.0 33.0 30.0 34.0 2 31.82898251184432 31.0 31.0 34.0 30.0 34.0 3 31.92805709901967 33.0 31.0 34.0 30.0 34.0 4 35.608658487000234 37.0 35.0 37.0 33.0 37.0 5 35.50051670685498 37.0 35.0 37.0 33.0 37.0 6 35.54206848043808 37.0 35.0 37.0 33.0 37.0 7 36.05930452311258 37.0 35.0 37.0 35.0 37.0 8 36.06612017220234 37.0 35.0 37.0 35.0 37.0 9 37.7877741000897 39.0 38.0 39.0 35.0 39.0 10 37.12704720476291 39.0 37.0 39.0 33.0 39.0 11 36.86053574429917 39.0 37.0 39.0 32.0 39.0 12 36.558689078930506 39.0 35.0 39.0 32.0 39.0 13 36.45358430364946 39.0 35.0 39.0 32.0 39.0 14 37.55215688362807 40.0 36.0 41.0 32.0 41.0 15 37.71629881465284 40.0 36.0 41.0 33.0 41.0 16 37.74397854848363 40.0 36.0 41.0 33.0 41.0 17 37.68445269844123 40.0 36.0 41.0 33.0 41.0 18 37.57874495982001 39.0 36.0 41.0 33.0 41.0 19 37.52511783301521 39.0 36.0 41.0 33.0 41.0 20 37.337130837497774 39.0 35.0 41.0 32.0 41.0 21 37.25744981453469 39.0 35.0 41.0 32.0 41.0 22 37.19900785627395 39.0 35.0 41.0 32.0 41.0 23 37.09050052613682 39.0 35.0 41.0 32.0 41.0 24 37.04131325082665 39.0 35.0 41.0 32.0 41.0 25 36.90250631946628 38.0 35.0 41.0 32.0 41.0 26 36.809051994077976 38.0 35.0 41.0 31.0 41.0 27 36.67234295356628 38.0 35.0 41.0 31.0 41.0 28 36.74116786288602 38.0 35.0 41.0 31.0 41.0 29 36.68147615632227 38.0 35.0 41.0 31.0 41.0 30 36.64330308531959 38.0 35.0 41.0 31.0 41.0 31 36.47532981318121 38.0 35.0 40.0 31.0 41.0 32 36.214012047063314 38.0 35.0 41.0 30.0 41.0 33 36.053491224304025 38.0 35.0 41.0 30.0 41.0 34 35.91370080260134 39.0 35.0 41.0 29.0 41.0 35 35.6922812371898 38.0 35.0 41.0 27.0 41.0 36 35.54355786090573 38.0 35.0 41.0 26.0 41.0 37 35.50111356845021 38.0 35.0 41.0 26.0 41.0 38 35.4601486717888 38.0 35.0 41.0 26.0 41.0 39 35.373203798835455 38.0 35.0 41.0 25.0 41.0 40 35.27719506113671 38.0 35.0 40.0 25.0 41.0 41 35.28671600204797 38.0 35.0 40.0 25.0 41.0 42 35.10528949174129 38.0 34.0 40.0 24.0 41.0 43 35.132407865038275 38.0 34.0 40.0 24.0 41.0 44 34.799226520624174 38.0 34.0 40.0 23.0 41.0 45 34.73141061803465 38.0 34.0 40.0 23.0 41.0 46 34.76029683324985 38.0 34.0 40.0 23.0 41.0 47 34.68814148060505 38.0 34.0 40.0 23.0 41.0 48 34.655862695207304 38.0 34.0 40.0 23.0 41.0 49 34.652559432382404 38.0 34.0 40.0 24.0 41.0 50 34.093714481604074 37.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 2.0 13 4.0 14 18.0 15 27.0 16 97.0 17 237.0 18 610.0 19 1277.0 20 2314.0 21 3805.0 22 6071.0 23 8890.0 24 13071.0 25 19909.0 26 28955.0 27 35118.0 28 36546.0 29 37373.0 30 41752.0 31 50055.0 32 61596.0 33 77681.0 34 120566.0 35 185382.0 36 129648.0 37 163999.0 38 256198.0 39 521560.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.861148692312856 23.594892950432197 28.590779819643515 15.953178537611434 2 33.57102403366388 25.138911770432387 28.261618415731853 13.028445780171879 3 27.845590352142796 25.17097366653298 34.02366256684878 12.959773414475448 4 23.973644899523674 27.848918576651506 33.8023356370194 14.37510088680542 5 21.791716382020265 32.090407890554665 32.524297425673815 13.593578301751256 6 18.881627812419048 40.37219534680931 29.961009849880433 10.785166990891204 7 85.90491373519426 3.2106272427379525 9.217573247287635 1.6668857747801569 8 86.23596113299419 2.574936361573873 8.808368043941439 2.380734461490501 9 80.48240395437448 5.498171417984505 11.09713256817452 2.9222920594664967 10 37.05162575446689 36.87034845955902 15.733016486360105 10.34500929961398 11 28.15539258349545 24.624423731793918 32.95657831894708 14.263605365763555 12 27.611727109997265 23.38682344822919 32.223093107635336 16.77835633413821 13 21.129843468054315 30.36117337664463 32.839757638691275 15.66922551660978 14 17.132479421865217 34.030929190359466 32.13533892142229 16.701252466353036 15 16.184545611375427 26.063936302220537 41.683626744058984 16.067891342345057 16 18.478746235639402 24.54793003850201 39.73733652177241 17.23598720408617 17 19.03250732348068 23.91612208593143 32.50987511946939 24.5414954711185 18 20.962933008942382 25.184064682933922 34.710663575855506 19.14233873226819 19 23.810950191456115 26.9535152429909 30.64174270272909 18.5937918628239 20 25.02209109017658 26.013513700913542 29.68704150240492 19.27735370650496 21 22.233538185551843 28.318031821154527 31.33523374952781 18.11319624376582 22 21.98042671166426 25.82241814370497 30.44437898936244 21.75277615526833 23 18.833091205000326 29.965835775418064 30.408323223851387 20.79274979573022 24 18.744504962660095 26.459995018757322 35.80803466678648 18.987465351796104 25 18.715993172702124 28.00218331527772 33.7002146150104 19.581608897009755 26 18.23672884344753 30.872610542816776 31.098818868592264 19.791841745143426 27 19.09757411262601 29.19196810673394 31.779773603074833 19.930684177565215 28 17.612631277655467 28.70604732846192 35.86067608443262 17.820645309449993 29 18.621638007880126 26.30595369441241 34.635501172367086 20.43690712534038 30 19.991202393215303 28.648524514869678 32.38673081264703 18.973542279267992 31 23.358256187862743 27.74585455769838 28.783816841148834 20.112072413290043 32 24.36310263745151 28.675483133390244 28.790140467715393 18.17127376144285 33 22.262105445918294 29.64127841541012 28.618847846333654 19.477768292337927 34 20.519003329888623 28.736334171491208 30.65267037319936 20.091992125420813 35 20.429973324280564 29.122130862459457 30.17063252352084 20.27726328973914 36 24.160302824053968 28.176471338717292 29.138161810509754 18.525064026718987 37 22.109617293010782 30.059913588197674 29.19047040570502 18.639998713086523 38 22.19082597102337 29.76164920180856 28.622120600433888 19.425404226734187 39 21.58164994511203 29.350336122940174 27.97589034165889 21.092123590288907 40 22.685954837102827 26.844848712781438 28.87994705904215 21.589249391073594 41 19.44193440846079 26.584637026608597 28.722632980597005 25.250795584333602 42 21.65819910881242 27.967126017119277 27.83510644494035 22.539568429127954 43 21.442419219830892 27.981770204957613 28.61069369628731 21.965116878924185 44 21.380680655194276 29.962174728458486 28.776993980905974 19.880150635441264 45 19.389182049997697 31.051391669343115 28.16021850903308 21.39920777162611 46 22.02929614153386 29.49638970846418 28.593331458433525 19.88098269156844 47 21.7342490388365 27.095408547879007 29.308123142088004 21.862219271196494 48 22.20130987822581 25.67331368571465 30.10939319256053 22.015983243499008 49 21.594519079879053 25.29195462742468 30.35934285316484 22.75418343953143 50 19.822516881032058 28.66960327009152 29.865434336071907 21.64244551280451 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1447.0 1 1587.0 2 1727.0 3 14199.0 4 26671.0 5 19205.5 6 11740.0 7 11837.0 8 11934.0 9 12319.0 10 12704.0 11 12748.0 12 12792.0 13 12566.0 14 12340.0 15 11761.5 16 11183.0 17 10543.0 18 9903.0 19 9820.0 20 9737.0 21 10130.0 22 10523.0 23 11365.5 24 12208.0 25 14117.0 26 16026.0 27 19110.0 28 22194.0 29 25842.0 30 29490.0 31 34679.5 32 39869.0 33 46286.0 34 52703.0 35 59747.5 36 66792.0 37 73381.0 38 79970.0 39 91827.0 40 103684.0 41 117543.5 42 131403.0 43 145191.0 44 158979.0 45 163914.0 46 168849.0 47 170762.5 48 172676.0 49 166094.0 50 159512.0 51 142725.5 52 125939.0 53 110367.0 54 94795.0 55 81644.0 56 68493.0 57 59435.0 58 50377.0 59 45551.0 60 40725.0 61 35190.5 62 29656.0 63 24619.5 64 19583.0 65 15263.0 66 10943.0 67 8294.0 68 5645.0 69 4590.0 70 3535.0 71 3059.5 72 2584.0 73 1978.5 74 1373.0 75 1169.5 76 966.0 77 800.5 78 635.0 79 465.5 80 296.0 81 192.0 82 88.0 83 71.5 84 55.0 85 32.0 86 9.0 87 7.5 88 6.0 89 3.0 90 0.0 91 1.5 92 3.0 93 2.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1802763.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.32268523099895 #Duplication Level Percentage of deduplicated Percentage of total 1 76.84828759073433 20.99701572382917 2 7.027279644390442 3.8400829950777258 3 2.8301655081843853 2.319831639952564 4 1.6325175097848272 1.7841904821578036 5 1.1711577406466174 1.599958715176772 6 0.9130050278956315 1.4967449394907055 7 0.7228816536632018 1.3825747517612563 8 0.5837010400378522 1.2758623828768763 9 0.5201256350467302 1.2790106106259722 >10 6.708179100570466 42.18935768677651 >50 0.9601185916344762 17.321981141078368 >100 0.08053687828753292 3.1627190492408217 >500 0.0014308553865133838 0.2953333747841665 >1k 4.0881582471810965E-4 0.1832988154390383 >5k 0.0 0.0 >10k+ 2.0440791235905482E-4 0.8720376917322195 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 15614 0.8661149579839391 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 2058 0.11415810064883737 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.05890957380421054 0.0 2 0.0 0.0 0.0 0.21228525324737638 0.0 3 0.0 0.0 0.0 0.39411725224003374 0.0 4 0.0 0.0 0.0 0.5793329461498822 0.0 5 0.0 0.0 0.0 0.9345099716379801 0.0 6 0.0 0.0 0.0 1.6735422237975819 0.0 7 0.0 0.0 0.0 2.151475263248691 0.0 8 0.0 0.0 0.0 3.4871472290034795 0.0 9 0.0 0.0 0.0 4.301230943834548 0.0 10 0.0 0.0 0.0 5.368592543778633 0.0 11 0.0 0.0 0.0 5.905878920301781 0.0 12 0.0 0.0 0.0 6.46707304287918 0.0 13 0.0 0.0 0.0 6.792074166154952 0.0 14 0.0 0.0 0.0 6.951107827262929 0.0 15 0.0 0.0 0.0 7.084070396385992 0.0 16 0.0 0.0 0.0 7.317434404855214 0.0 17 0.0 0.0 0.0 7.577757031845007 0.0 18 0.0 0.0 0.0 8.034001141581006 0.0 19 0.0 0.0 0.0 8.205127351737305 0.0 20 0.0 0.0 0.0 8.419575950915345 0.0 21 0.0 0.0 0.0 8.610116804039134 0.0 22 0.0 0.0 0.0 8.821570001159332 0.0 23 5.547040847854099E-5 0.0 0.0 9.047279093258515 0.0 24 5.547040847854099E-5 0.0 0.0 9.223286699360925 0.0 25 5.547040847854099E-5 0.0 0.0 9.384206354357174 0.0 26 5.547040847854099E-5 0.0 0.0 9.542907193014278 0.0 27 1.1094081695708199E-4 0.0 0.0 9.740714669648757 0.0 28 1.1094081695708199E-4 0.0 0.0 9.912561995115276 0.0 29 1.1094081695708199E-4 0.0 0.0 10.090455595105956 0.0 30 1.1094081695708199E-4 0.0 0.0 10.355437736407946 0.0 31 1.1094081695708199E-4 0.0 0.0 10.558681313073322 0.0 32 1.1094081695708199E-4 0.0 0.0 10.760926422386081 0.0 33 1.1094081695708199E-4 0.0 0.0 10.95718072758316 0.0 34 1.6641122543562299E-4 0.0 0.0 11.15071698276479 0.0 35 1.6641122543562299E-4 0.0 0.0 11.36050606763063 0.0 36 1.6641122543562299E-4 0.0 0.0 11.561863650407735 0.0 37 1.6641122543562299E-4 0.0 0.0 11.766050224017244 0.0 38 1.6641122543562299E-4 0.0 0.0 11.967851570062177 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCCGGAT 20 7.8576733E-4 44.000004 23 CTTAACG 40 8.3164196E-9 44.000004 1 CCGGATA 35 1.4466968E-7 43.999996 20 CGTTTTT 11550 0.0 43.066666 1 CGACGGT 175 0.0 41.485714 28 GCGAACG 80 0.0 41.250004 1 TACGCAC 65 0.0 40.615387 13 ATCGTAG 60 3.6379788E-12 40.333332 1 TAACGCG 50 1.3496901E-9 39.600002 1 GCGACGT 95 0.0 39.36842 17 CGACGTC 95 0.0 39.36842 18 AGGGCGA 1855 0.0 39.137466 6 GCGTAAG 130 0.0 38.92308 1 GACCGAT 860 0.0 38.88372 9 GGACCGA 885 0.0 38.531075 8 TCGGTAC 40 4.1262865E-7 38.500004 36 GGGACCG 1115 0.0 38.475338 7 CGAACGG 155 0.0 38.32258 2 AACGCGG 115 0.0 38.26087 2 AGCGAAG 210 0.0 37.714287 1 >>END_MODULE