##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547214_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 4042026 Sequences flagged as poor quality 0 Sequence length 50 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.63002464605621 31.0 30.0 31.0 28.0 34.0 2 30.965674144599763 31.0 31.0 33.0 28.0 34.0 3 31.081586560798964 31.0 31.0 34.0 28.0 34.0 4 34.92110169504105 35.0 35.0 37.0 32.0 37.0 5 34.740702805969086 35.0 35.0 37.0 32.0 37.0 6 34.77644874129954 35.0 35.0 37.0 32.0 37.0 7 35.46318331450614 35.0 35.0 37.0 35.0 37.0 8 34.43422778576882 36.0 35.0 37.0 33.0 37.0 9 36.55069487430313 39.0 37.0 39.0 32.0 39.0 10 35.94066069837255 38.0 35.0 39.0 30.0 39.0 11 35.754751948651496 37.0 35.0 39.0 30.0 39.0 12 35.57669124345068 37.0 35.0 39.0 30.0 39.0 13 35.52309435911595 37.0 35.0 39.0 30.0 39.0 14 36.467365870481785 38.0 35.0 40.0 30.0 41.0 15 36.57937925189002 38.0 35.0 40.0 30.0 41.0 16 36.59217852631329 38.0 35.0 40.0 30.0 41.0 17 36.4987560693573 38.0 35.0 40.0 30.0 41.0 18 36.35876389711496 38.0 35.0 40.0 30.0 41.0 19 36.28283390557112 38.0 35.0 40.0 30.0 41.0 20 36.090346276842354 38.0 34.0 40.0 30.0 41.0 21 35.937670118895824 38.0 34.0 40.0 30.0 41.0 22 35.89747616665504 38.0 34.0 40.0 30.0 41.0 23 35.754934530356806 37.0 34.0 40.0 29.0 41.0 24 35.64456661090255 37.0 34.0 40.0 29.0 41.0 25 35.46139584455914 37.0 34.0 40.0 27.0 41.0 26 35.3059745286151 37.0 34.0 40.0 27.0 41.0 27 35.118032145265765 37.0 33.0 40.0 27.0 41.0 28 35.115320633761385 37.0 33.0 40.0 27.0 41.0 29 34.95447827401407 37.0 33.0 40.0 26.0 41.0 30 34.912924607610144 37.0 33.0 40.0 26.0 41.0 31 34.802597014467494 37.0 33.0 40.0 25.0 41.0 32 34.44678361791834 37.0 33.0 40.0 24.0 41.0 33 34.15189412438218 37.0 33.0 40.0 23.0 41.0 34 33.91644511935351 37.0 33.0 40.0 22.0 41.0 35 33.644686105433266 37.0 32.0 40.0 20.0 41.0 36 33.560552307184565 37.0 32.0 40.0 18.0 41.0 37 33.5646378820918 37.0 32.0 40.0 18.0 41.0 38 33.545483626280486 37.0 32.0 40.0 18.0 41.0 39 33.43835368698766 37.0 32.0 40.0 18.0 41.0 40 33.3605555728736 37.0 32.0 40.0 18.0 41.0 41 33.36544099419449 37.0 32.0 40.0 18.0 41.0 42 33.20510679545357 37.0 31.0 40.0 18.0 41.0 43 33.242241390827274 37.0 32.0 40.0 18.0 41.0 44 32.86178193806769 36.0 31.0 40.0 16.0 41.0 45 32.82604763056942 36.0 31.0 40.0 16.0 41.0 46 32.78542171673314 36.0 31.0 40.0 17.0 41.0 47 32.74503800816719 36.0 31.0 40.0 17.0 41.0 48 32.75274874530743 36.0 31.0 40.0 17.0 41.0 49 32.74710652529202 36.0 31.0 40.0 17.0 41.0 50 32.20434059553303 35.0 30.0 39.0 15.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 3.0 12 5.0 13 15.0 14 64.0 15 214.0 16 679.0 17 1750.0 18 3975.0 19 7501.0 20 12536.0 21 18665.0 22 27074.0 23 38167.0 24 52911.0 25 74412.0 26 99260.0 27 114925.0 28 121515.0 29 130649.0 30 148401.0 31 175081.0 32 206724.0 33 248523.0 34 322120.0 35 370353.0 36 373470.0 37 435436.0 38 526644.0 39 530953.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.558678741799284 23.28282895755742 26.63053132265849 18.527960977984804 2 35.029116586583065 24.60097980567171 27.65123232755059 12.718671280194634 3 27.15017172081525 25.047538041566288 34.86892464323584 12.93336559438262 4 23.619788690127177 27.78000438394013 34.443469685746706 14.156737240185985 5 21.485537203372765 31.60969276298569 33.53753785848978 13.36723217515177 6 19.91179670788857 39.95169749031797 30.271106618314676 9.86539918347878 7 85.35306304313728 2.6603737828504816 10.812399524396923 1.1741636496153167 8 83.42190277845813 5.098903371724972 10.210894239670898 1.2682996101460011 9 80.09686231607614 5.392469024197272 12.012441285632502 2.4982273740940806 10 31.295197012587252 38.561849923775846 18.820586507855218 11.322366555781679 11 26.132513744345037 25.65639112662808 32.737790405108726 15.473304723918154 12 25.305799616331022 23.54885891382193 33.857352723609395 17.287988746237655 13 22.00403955837988 26.52204612241485 34.72038527213827 16.75352904706699 14 19.33473461081151 29.235017290833852 33.91591246567934 17.514335632675294 15 18.60336870668323 25.65666326738126 38.68525338530727 17.05471464062824 16 21.09778611023284 24.27925995527985 37.40819579092267 17.214758143564637 17 20.68000057396959 23.502644465918824 34.36036779575391 21.456987164357677 18 21.64055847240963 23.780302254364518 35.71646990890212 18.862669364323732 19 23.692301830814547 25.464531895638476 32.52821728509416 18.31494898845282 20 25.387516062489457 25.28217285094158 31.781685718993398 17.548625367575568 21 23.5649646983963 25.72600967930439 33.26321997928762 17.445805643011695 22 22.906359335640097 23.510932388856478 32.938061259378344 20.64464701612508 23 20.130127812141733 27.372881817187718 33.028115108611374 19.468875262059175 24 19.773821346027955 25.633457083155825 36.09952038903263 18.49320118178359 25 20.387820365331642 26.53048248576333 34.14253149287016 18.93916565603487 26 20.00692227115808 28.39843187550006 32.21716040421313 19.377485449128727 27 19.705514016980594 26.969965062075307 33.746368776450225 19.578152144493874 28 18.747430125387616 26.865883594019436 35.90808173920702 18.47860454138593 29 19.766473545692183 25.429326778204793 35.33035166028126 19.47384801582177 30 20.407142358807192 26.14411683645776 34.40868514947702 19.04005565525803 31 22.5020818767618 26.47684601731904 31.911843219217296 19.109228886701867 32 22.565985473621396 26.792158189977005 32.08898210946688 18.55287422693471 33 22.41685234088054 26.868382340934964 31.06892434635502 19.64584097182947 34 20.26275931921269 27.966198139249972 31.854075159338414 19.916967382198926 35 20.532104444652262 27.2831495888448 31.88586614732315 20.29887981917979 36 22.75737464331006 28.394102363517703 29.393427949251194 19.455095043921045 37 20.992393418548026 29.817670643385274 29.444021389273594 19.745914548793106 38 21.031581687005477 30.047654319888096 29.015102822198568 19.905661170907855 39 21.377447844224655 29.095161683769476 28.934153318162725 20.59323715384315 40 22.422765217245015 27.679708146360266 29.660496988391465 20.237029648003254 41 20.142992647746453 27.658926488844948 29.940480343273396 22.2576005201352 42 21.2047374262313 28.772650151186557 28.409490686106427 21.61312173647572 43 21.171412554001385 27.78997463153379 29.481428372801165 21.55718444166366 44 21.26787408096831 28.44284029840481 29.988599776448744 20.300685844178144 45 20.718273459893627 29.16277629089966 29.071906019407102 21.04704422979961 46 21.419011159255284 29.129748299491393 29.10458764985678 20.34665289139654 47 21.132669606776403 28.507956158619464 29.52482245289862 20.83455178170551 48 21.408966691456214 27.77901478120131 30.28686604193046 20.52515248541202 49 21.108919141044616 27.518749260890456 30.92402176532264 20.448309832742293 50 20.443980320759934 28.788508535076225 30.253714350179834 20.513796793984007 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2022.0 1 3208.0 2 4394.0 3 39990.0 4 75586.0 5 56598.0 6 37610.0 7 37502.5 8 37395.0 9 38020.0 10 38645.0 11 38197.0 12 37749.0 13 37193.5 14 36638.0 15 34711.0 16 32784.0 17 31800.5 18 30817.0 19 29675.5 20 28534.0 21 29763.5 22 30993.0 23 32575.0 24 34157.0 25 38626.0 26 43095.0 27 51853.0 28 60611.0 29 70124.0 30 79637.0 31 91955.0 32 104273.0 33 119607.0 34 134941.0 35 147753.0 36 160565.0 37 174105.5 38 187646.0 39 204526.5 40 221407.0 41 237371.5 42 253336.0 43 275251.0 44 297166.0 45 301641.0 46 306116.0 47 297057.5 48 287999.0 49 284290.0 50 280581.0 51 263032.5 52 245484.0 53 226354.0 54 207224.0 55 190522.0 56 173820.0 57 160041.5 58 146263.0 59 134634.5 60 123006.0 61 109394.5 62 95783.0 63 84118.0 64 72453.0 65 58272.0 66 44091.0 67 36956.0 68 29821.0 69 25424.0 70 21027.0 71 18171.5 72 15316.0 73 13066.5 74 10817.0 75 8377.5 76 5938.0 77 4554.5 78 3171.0 79 2540.5 80 1910.0 81 1287.0 82 664.0 83 513.0 84 362.0 85 234.0 86 106.0 87 78.0 88 50.0 89 32.5 90 15.0 91 11.0 92 7.0 93 4.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 4042026.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 24.021563083866397 #Duplication Level Percentage of deduplicated Percentage of total 1 80.35346243931174 19.30215766993016 2 5.879434240306493 2.8246640100193305 3 2.1219196589595524 1.5291548083977946 4 1.2139197484746445 1.1664099926693958 5 0.846387985040811 1.0165781188042207 6 0.6515253029019977 0.9390393698637299 7 0.5551492438927472 0.9334886808191251 8 0.43468417980299995 0.8353434757357189 9 0.38787941814740917 0.8385722920765242 >10 5.599294289206442 32.881595799669675 >50 1.6964225991830033 28.014285611718424 >100 0.25675021490565314 8.074796966572585 >500 0.002747922550997984 0.4535607077060226 >1k 3.170679866506241E-4 0.13623323579808158 >5k 0.0 0.0 >10k+ 1.0568932888354136E-4 1.0541192602192224 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 41520 1.0272076428998724 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.015314102383309757 0.0 2 0.0 0.0 0.0 0.05724851844099964 0.0 3 0.0 0.0 0.0 0.10264654408457541 0.0 4 0.0 0.0 0.0 0.15405640636651027 0.0 5 0.0 0.0 0.0 0.24680692306284027 0.0 6 0.0 0.0 0.0 0.4737475711437779 0.0 7 0.0 0.0 0.0 0.6037566309568518 0.0 8 0.0 0.0 0.0 0.9158031145766999 0.0 9 0.0 0.0 0.0 1.0891567743502888 0.0 10 0.0 0.0 0.0 1.3233215224246455 0.0 11 0.0 0.0 0.0 1.4599856606563144 0.0 12 0.0 0.0 0.0 1.5918502256046845 0.0 13 0.0 0.0 0.0 1.6738388125162975 0.0 14 0.0 0.0 0.0 1.7164164703542233 0.0 15 0.0 0.0 0.0 1.7533781326493199 0.0 16 0.0 0.0 0.0 1.8148077226618533 0.0 17 0.0 0.0 0.0 1.8868755421167505 0.0 18 0.0 0.0 0.0 1.9989480522886296 0.0 19 0.0 0.0 0.0 2.05300510189692 0.0 20 0.0 0.0 0.0 2.114014110745453 0.0 21 0.0 0.0 0.0 2.1847954466398782 0.0 22 0.0 0.0 0.0 2.261860759925839 0.0 23 0.0 0.0 0.0 2.353473233472521 0.0 24 2.47400684706135E-5 0.0 0.0 2.422027963204591 0.0 25 2.47400684706135E-5 0.0 0.0 2.488479787116659 0.0 26 2.47400684706135E-5 0.0 0.0 2.552853445277195 0.0 27 2.47400684706135E-5 0.0 0.0 2.621729795899383 0.0 28 2.47400684706135E-5 0.0 0.0 2.699364130760168 0.0 29 2.47400684706135E-5 0.0 0.0 2.7800909741797803 0.0 30 2.47400684706135E-5 0.0 0.0 2.890951220996599 0.0 31 2.47400684706135E-5 0.0 0.0 2.9838749181722237 0.0 32 2.47400684706135E-5 0.0 0.0 3.0859771807504455 0.0 33 4.9480136941227E-5 0.0 0.0 3.1898607282585516 0.0 34 4.9480136941227E-5 0.0 0.0 3.28981060487983 0.0 35 4.9480136941227E-5 0.0 0.0 3.398691646219 0.0 36 4.9480136941227E-5 0.0 0.0 3.5014866307143993 0.0 37 4.9480136941227E-5 0.0 0.0 3.6086853473975675 0.0 38 4.9480136941227E-5 0.0 0.0 3.726794434276276 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 34820 0.0 42.925903 1 AGGGCGA 4200 0.0 38.342857 6 GGGCGAT 8385 0.0 37.152058 7 GTTTTTT 40045 0.0 37.09427 2 AAGGGAT 7415 0.0 36.256233 5 TAAGGGA 6125 0.0 36.205715 4 AGGGATT 8910 0.0 35.876545 6 TACGGGA 1745 0.0 35.805157 4 GGCGATA 1820 0.0 35.78022 8 TGGGCGA 2260 0.0 35.62832 6 GCGCGAC 970 0.0 35.608246 9 TAGGGAC 4625 0.0 35.295135 5 AAGGGAC 4930 0.0 35.253548 5 AGGGATC 5135 0.0 35.217136 6 ACGGGAC 1375 0.0 35.2 5 GACCGAT 2830 0.0 34.982334 9 GGCGATT 2460 0.0 34.96748 8 GTAGGGA 5935 0.0 34.91828 4 TAGGGAT 7620 0.0 34.90551 5 ATAGGGA 6820 0.0 34.80645 4 >>END_MODULE