##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547210_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3001475 Sequences flagged as poor quality 0 Sequence length 50 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.617084933241156 31.0 30.0 31.0 28.0 33.0 2 30.940105448154657 31.0 31.0 33.0 28.0 34.0 3 31.107509474508365 31.0 31.0 34.0 28.0 34.0 4 34.942703504110476 35.0 35.0 37.0 32.0 37.0 5 34.750438367802495 35.0 35.0 37.0 32.0 37.0 6 34.7721846758677 35.0 35.0 37.0 32.0 37.0 7 35.398709634429736 35.0 35.0 37.0 33.0 37.0 8 34.37051216485228 35.0 35.0 37.0 33.0 37.0 9 36.47833115384936 39.0 37.0 39.0 32.0 39.0 10 35.885921755137055 38.0 35.0 39.0 30.0 39.0 11 35.6809921788454 37.0 35.0 39.0 30.0 39.0 12 35.30205282402819 37.0 34.0 39.0 30.0 39.0 13 35.14593391582472 37.0 34.0 39.0 29.0 39.0 14 36.04810801356 38.0 34.0 40.0 29.0 41.0 15 36.2292636120574 38.0 34.0 40.0 30.0 41.0 16 36.31033908328405 38.0 34.0 40.0 30.0 41.0 17 36.19986206781666 38.0 34.0 40.0 30.0 41.0 18 36.13712458041463 38.0 34.0 40.0 30.0 41.0 19 36.1104650213645 38.0 34.0 40.0 30.0 41.0 20 35.97043153782724 38.0 34.0 40.0 30.0 41.0 21 35.79736729441358 38.0 34.0 40.0 29.0 41.0 22 35.73771595632147 38.0 34.0 40.0 29.0 41.0 23 35.60928010394889 37.0 34.0 40.0 29.0 41.0 24 35.50886014376265 37.0 34.0 40.0 29.0 41.0 25 35.297170557809075 37.0 34.0 40.0 27.0 41.0 26 35.12496156056606 37.0 33.0 40.0 27.0 41.0 27 34.92945168625426 37.0 33.0 40.0 26.0 41.0 28 34.913892336268 37.0 33.0 40.0 26.0 41.0 29 34.73812075729433 37.0 33.0 40.0 26.0 41.0 30 34.756116576016794 37.0 33.0 40.0 26.0 41.0 31 34.709713390916136 37.0 33.0 40.0 25.0 41.0 32 34.50205848791011 37.0 33.0 40.0 25.0 41.0 33 34.374976969656586 37.0 33.0 40.0 24.0 41.0 34 34.22635037773095 37.0 33.0 40.0 24.0 41.0 35 34.031027744692196 36.0 33.0 40.0 23.0 41.0 36 33.97326647731532 37.0 33.0 40.0 23.0 41.0 37 33.98343847608259 37.0 33.0 40.0 23.0 41.0 38 33.96567720870572 36.0 32.0 40.0 23.0 41.0 39 33.85397579523401 36.0 32.0 40.0 23.0 41.0 40 33.754315128395206 36.0 32.0 40.0 23.0 41.0 41 33.74523692517845 36.0 32.0 40.0 23.0 41.0 42 33.582631206323555 36.0 32.0 40.0 22.0 41.0 43 33.61437559866399 36.0 32.0 40.0 23.0 41.0 44 33.30474849865483 35.0 31.0 39.0 21.0 41.0 45 33.22238799257032 35.0 31.0 39.0 22.0 41.0 46 33.15628882466121 35.0 31.0 39.0 21.0 41.0 47 33.07104107147319 35.0 31.0 39.0 21.0 41.0 48 33.059000658009815 35.0 31.0 39.0 21.0 41.0 49 33.05078236533704 35.0 31.0 39.0 21.0 41.0 50 32.4861143271225 35.0 31.0 39.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 0.0 10 1.0 11 4.0 12 3.0 13 18.0 14 55.0 15 144.0 16 442.0 17 1143.0 18 2478.0 19 4599.0 20 7955.0 21 12335.0 22 18089.0 23 25251.0 24 34871.0 25 46726.0 26 60381.0 27 73958.0 28 84843.0 29 98774.0 30 116152.0 31 138805.0 32 166424.0 33 202657.0 34 270090.0 35 300130.0 36 282289.0 37 327804.0 38 375535.0 39 349517.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.447654903006026 23.65940079460932 27.656635487551956 15.236308814832707 2 32.581847258431274 25.42443298711467 28.22618879051133 13.767530963942729 3 29.169291764882267 26.15683955388601 31.033208672402736 13.640660008828991 4 25.685338042129285 28.425190947784007 30.721162095303146 15.168308914783566 5 22.948616930009415 32.20376648147994 29.71565646890279 15.131960119607859 6 21.231960952531672 41.44472301118617 27.189931616955 10.133384419327164 7 87.91134358940188 3.669329246453827 6.965941745308557 1.4533854188357391 8 86.00138265352868 5.753604477798416 6.58166401519253 1.663348853480372 9 82.82617712957796 5.103557417603012 8.752163519602863 3.3181019332161688 10 40.08589110354076 29.731415387434513 16.012194004614397 14.17049950441033 11 34.1509757702463 25.725518286842302 23.8096602503769 16.313845692534503 12 30.605452319276356 22.670886813983124 27.867032042579066 18.856628824161454 13 24.29468844484795 27.737595682122958 28.879301010336583 19.08841486269251 14 21.101891569978093 30.252892327938763 29.705094994960813 18.94012110712233 15 20.036948500320676 24.144928743367842 36.321941711991606 19.496181044319876 16 23.242405817139904 22.078211545989888 34.73835364279229 19.94102899407791 17 22.62800789611774 22.230136849382387 29.15323299377806 25.98862226072181 18 24.045077836730275 23.418086107663733 31.123331028910783 21.41350502669521 19 27.9473925320051 24.78941187249602 26.776368285592916 20.486827309905962 20 29.551104040513415 24.66933757569195 25.620969689902463 20.15858869389217 21 26.745983224914415 25.731981775626984 27.909477840061967 19.61255715939663 22 25.477873378922027 23.296146061519753 27.58090605452319 23.645074505035023 23 23.774744084158623 26.68414696107747 26.926094670120527 22.615014284643383 24 23.330595790403052 24.550795858702802 31.68065701030327 20.437951340590878 25 23.284618395955324 25.184417661316523 29.84286059354151 21.688103349186648 26 21.68970256290657 27.762616713449223 27.625417503060994 22.922263220583215 27 22.12335601662516 26.701505093329114 28.522543082984196 22.65259580706153 28 21.058746116492724 26.74978135749923 31.30310930459191 20.888363221416135 29 22.188024221424467 25.02436302151442 31.13625800648015 21.651354750580964 30 23.088314911835013 25.813008604102983 30.108430021905896 20.990246462156108 31 26.517962002015675 25.372525175122227 27.10523992370418 21.004272899157915 32 26.797990987764347 25.06564272565988 27.46856129069874 20.667804995877027 33 26.459257531713575 24.74593324948567 26.707935265161296 22.08687395363946 34 22.329288100017493 25.97129744542267 28.803704845117817 22.895709609442026 35 22.60212062402652 25.585054015109236 29.543574409248784 22.269250951615454 36 26.885647889787524 25.694400253208837 26.305499795933667 21.114452061069976 37 23.482887580273033 28.051807861134943 26.943352851514675 21.521951707077353 38 23.747757352634956 29.02089805845459 25.574226005547274 21.65711858336318 39 23.40006163636212 27.239607193130045 25.967266094170366 23.393065076337468 40 25.07193962968207 24.731773544673867 27.30757377622669 22.88871304941737 41 21.793651454701436 25.165293730582462 27.739694650130353 25.301360164585745 42 23.21598547380871 26.582563572909983 25.690202317194043 24.511248636087256 43 22.84430155173706 25.502494606818317 27.149684738336983 24.50351910310764 44 22.684846617079934 26.362638369468343 28.1437959669829 22.80871904646882 45 21.903031009753537 27.99610191655769 26.803621552736573 23.2972455209522 46 23.264428322741317 27.526799323665863 27.189098693142537 22.01967366045028 47 22.539384802472117 26.8416028785847 27.828550962443465 22.790461356499723 48 23.222182426973404 25.701363496280994 28.756761259047636 22.319692817697963 49 23.240606701704994 25.312388075862703 28.94610150009579 22.500903722336517 50 22.112794542683183 27.83304875103074 27.548488659742294 22.505668046543782 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2021.0 1 3058.0 2 4095.0 3 17932.0 4 31769.0 5 22950.0 6 14131.0 7 14282.0 8 14433.0 9 14697.0 10 14961.0 11 15145.5 12 15330.0 13 15389.0 14 15448.0 15 14809.0 16 14170.0 17 13614.0 18 13058.0 19 12776.5 20 12495.0 21 13034.5 22 13574.0 23 14577.5 24 15581.0 25 19055.0 26 22529.0 27 25061.5 28 27594.0 29 32530.0 30 37466.0 31 45510.0 32 53554.0 33 60069.5 34 66585.0 35 73248.5 36 79912.0 37 88260.0 38 96608.0 39 112215.0 40 127822.0 41 146595.0 42 165368.0 43 182186.5 44 199005.0 45 205126.5 46 211248.0 47 216106.0 48 220964.0 49 225555.5 50 230147.0 51 215020.5 52 199894.0 53 189027.5 54 178161.0 55 168961.0 56 159761.0 57 156676.0 58 153591.0 59 147827.0 60 142063.0 61 131798.0 62 121533.0 63 109721.5 64 97910.0 65 84714.0 66 71518.0 67 60260.0 68 49002.0 69 43586.5 70 38171.0 71 33136.5 72 28102.0 73 23141.5 74 18181.0 75 14392.0 76 10603.0 77 8639.0 78 6675.0 79 4832.5 80 2990.0 81 2495.0 82 2000.0 83 1441.5 84 883.0 85 597.0 86 311.0 87 248.5 88 186.0 89 115.0 90 44.0 91 31.5 92 19.0 93 13.0 94 7.0 95 4.0 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 3001475.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.99176173196225 #Duplication Level Percentage of deduplicated Percentage of total 1 81.17751146606722 17.852364901553834 2 5.856783816753689 2.5760198842731916 3 1.8574672722230992 1.2254693302694475 4 1.077724047498893 0.9480420186160647 5 0.743897424843935 0.8179807460094057 6 0.5582463822392759 0.7366092855561648 7 0.45677092044730655 0.7031638073996376 8 0.37778135259952067 0.6646461994517661 9 0.32891912676512464 0.6510159958413336 >10 5.029881335372407 27.856946018898682 >50 2.1109708364509427 32.6496928875138 >100 0.4197004325626373 11.888945400728614 >500 0.003259189631977288 0.4686542114233558 >1k 9.311970377077964E-4 0.3345872285036164 >5k 0.0 0.0 >10k+ 1.5519950628463275E-4 0.6258620839611153 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 18337 0.6109329579623352 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 3137 0.10451527998733956 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.016092088056705454 0.0 2 0.0 0.0 0.0 0.07169808177645991 0.0 3 0.0 0.0 0.0 0.12267301909894301 0.0 4 0.0 0.0 0.0 0.18767439342323358 0.0 5 0.0 0.0 0.0 0.30601620869739043 0.0 6 0.0 0.0 0.0 0.567554285809477 0.0 7 0.0 0.0 0.0 0.6940920713982291 0.0 8 0.0 0.0 0.0 1.0091371742226738 0.0 9 0.0 0.0 0.0 1.181185916924179 0.0 10 0.0 0.0 0.0 1.42663190597956 0.0 11 0.0 0.0 0.0 1.6019123930734056 0.0 12 0.0 0.0 0.0 1.7588352393406574 0.0 13 0.0 0.0 0.0 1.8444264903089314 0.0 14 0.0 0.0 0.0 1.8884381845592584 0.0 15 0.0 0.0 0.0 1.9313504193771396 0.0 16 0.0 0.0 0.0 2.0090455526033035 0.0 17 0.0 0.0 0.0 2.0860077128745034 0.0 18 0.0 0.0 0.0 2.2150775868531305 0.0 19 0.0 0.0 0.0 2.273882008012727 0.0 20 0.0 0.0 0.0 2.34004947567446 0.0 21 0.0 0.0 0.0 2.4125804812633787 0.0 22 0.0 0.0 0.0 2.493240823261896 0.0 23 0.0 0.0 0.0 2.5796983149951274 0.0 24 0.0 0.0 0.0 2.652462539251535 0.0 25 0.0 0.0 0.0 2.716697623668363 0.0 26 0.0 0.0 0.0 2.7789670078877884 0.0 27 0.0 0.0 0.0 2.8491658268018223 0.0 28 0.0 0.0 0.0 2.920963859435777 0.0 29 0.0 0.0 0.0 2.9964933907495483 3.3316952498354974E-5 30 0.0 0.0 0.0 3.0994094570169666 3.3316952498354974E-5 31 0.0 0.0 0.0 3.1860335335126897 3.3316952498354974E-5 32 0.0 0.0 0.0 3.284984882432804 3.3316952498354974E-5 33 0.0 0.0 0.0 3.375407091513339 3.3316952498354974E-5 34 0.0 0.0 0.0 3.4654294971638944 3.3316952498354974E-5 35 0.0 0.0 0.0 3.566746349711392 3.3316952498354974E-5 36 0.0 0.0 0.0 3.6559358315494883 3.3316952498354974E-5 37 0.0 0.0 0.0 3.7533212837021797 3.3316952498354974E-5 38 0.0 0.0 0.0 3.861934548846817 3.3316952498354974E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 12630 0.0 41.10847 1 TATAGCG 180 0.0 39.11111 1 GCGATAC 275 0.0 38.4 9 CGTCATA 630 0.0 37.015873 38 AGGGCGA 3480 0.0 36.793106 6 TCGTTGA 150 0.0 36.666668 24 ACGTTAG 60 1.9826984E-10 36.666668 1 GTTGATC 1710 0.0 36.152046 16 ACGGGAT 970 0.0 36.061855 5 TACGGGA 950 0.0 35.89474 4 GGGCGAT 6705 0.0 35.764355 7 CGGTCTA 320 0.0 35.75 31 GGCGATA 1760 0.0 35.500004 8 TTAGGGA 2685 0.0 35.232777 4 ACCCGCT 1520 0.0 35.17105 34 CATACGA 395 0.0 35.088608 18 TAAGGGA 3470 0.0 34.743515 4 GCGATAT 355 0.0 34.704224 9 TCAGACG 1580 0.0 34.670883 22 TTGATCC 1785 0.0 34.509804 17 >>END_MODULE