##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547207_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1829708 Sequences flagged as poor quality 0 Sequence length 50 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.649561022851735 31.0 30.0 31.0 28.0 34.0 2 30.993510439917188 31.0 31.0 33.0 28.0 34.0 3 31.05834045651 31.0 31.0 34.0 28.0 34.0 4 34.90824765481705 35.0 35.0 37.0 32.0 37.0 5 34.73967758789927 35.0 35.0 37.0 32.0 37.0 6 34.78710810686732 35.0 35.0 37.0 32.0 37.0 7 35.50720224210639 36.0 35.0 37.0 35.0 37.0 8 34.485644157428396 37.0 35.0 37.0 33.0 37.0 9 36.59565132797146 39.0 37.0 39.0 32.0 39.0 10 36.01587247801289 38.0 35.0 39.0 30.0 39.0 11 35.7750646551253 37.0 35.0 39.0 30.0 39.0 12 35.70578966698511 37.0 35.0 39.0 30.0 39.0 13 35.70492176893799 37.0 35.0 39.0 30.0 39.0 14 36.674429471806434 38.0 35.0 40.0 31.0 41.0 15 36.747209390788036 38.0 35.0 40.0 31.0 41.0 16 36.73771443312266 38.0 35.0 40.0 31.0 41.0 17 36.633595633838844 38.0 35.0 40.0 30.0 41.0 18 36.44120318651938 38.0 35.0 40.0 30.0 41.0 19 36.31268213288678 38.0 35.0 40.0 30.0 41.0 20 36.07764189695842 38.0 34.0 40.0 30.0 41.0 21 35.94333631377247 38.0 34.0 40.0 30.0 41.0 22 35.900114663104716 37.0 34.0 40.0 30.0 41.0 23 35.746884202288015 37.0 34.0 40.0 29.0 41.0 24 35.628267461256115 37.0 34.0 40.0 29.0 41.0 25 35.4467007850433 37.0 34.0 40.0 27.0 41.0 26 35.28424098271418 37.0 34.0 40.0 27.0 41.0 27 35.10499598843094 37.0 33.0 40.0 27.0 41.0 28 35.09708871579509 37.0 33.0 40.0 27.0 41.0 29 34.94892245101404 37.0 33.0 40.0 26.0 41.0 30 34.85773249064878 37.0 33.0 40.0 25.0 41.0 31 34.69086979998994 37.0 33.0 40.0 25.0 41.0 32 34.23182660839872 37.0 33.0 40.0 23.0 41.0 33 33.79584228740324 37.0 33.0 40.0 21.0 41.0 34 33.43609909340726 37.0 32.0 40.0 18.0 41.0 35 33.091493833988814 37.0 31.0 40.0 16.0 41.0 36 32.96617820985644 37.0 31.0 40.0 15.0 41.0 37 32.934070354395345 37.0 31.0 40.0 15.0 41.0 38 32.913063723829154 37.0 31.0 40.0 15.0 41.0 39 32.80085182990947 37.0 31.0 40.0 14.0 41.0 40 32.755838090012176 37.0 31.0 40.0 13.0 41.0 41 32.75707162017109 37.0 31.0 40.0 13.0 41.0 42 32.60734991594287 37.0 31.0 40.0 12.0 41.0 43 32.64923310167524 37.0 31.0 40.0 12.0 41.0 44 32.36206323631968 36.0 30.0 40.0 10.0 41.0 45 32.298476040985776 36.0 30.0 40.0 10.0 41.0 46 32.23633005922257 36.0 30.0 40.0 10.0 41.0 47 32.18892194820157 36.0 30.0 40.0 10.0 41.0 48 32.16401688138217 36.0 30.0 40.0 10.0 41.0 49 32.15055353094592 36.0 30.0 40.0 10.0 41.0 50 31.64053171325698 35.0 29.0 39.0 10.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 5.0 14 26.0 15 90.0 16 303.0 17 859.0 18 2079.0 19 4065.0 20 6518.0 21 9912.0 22 14335.0 23 19855.0 24 28078.0 25 39447.0 26 53439.0 27 60025.0 28 59339.0 29 60199.0 30 65677.0 31 75668.0 32 89616.0 33 107864.0 34 136727.0 35 157072.0 36 164542.0 37 193933.0 38 238509.0 39 241525.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.665334577976378 22.237045473922613 25.666335830635273 22.43128411746574 2 37.80739877619817 23.60403955166617 26.413613538335078 12.174948133800585 3 25.50505326532977 24.37197629348508 37.76077931560664 12.362191125578507 4 22.922837961029845 26.79252645777359 37.09154684791234 13.193088733284217 5 20.293183393197168 30.85951419570773 36.09985855666587 12.74744385442923 6 18.791960247208845 39.076726996876005 32.88562983820369 9.245682917711461 7 82.47310499817458 2.5308956401786515 14.045847752756178 0.950151608890599 8 80.89564017865146 4.843177162694812 13.27758308976077 0.98359956889296 9 77.35726137722521 5.425346558030024 15.037590697532066 2.1798013672126917 10 29.5024124067884 39.36005089336659 21.034230598543594 10.10330610130141 11 22.423304702171055 25.960918354185473 36.67076932494147 14.945007618702 12 22.088059952735627 23.81713366285768 37.534513703825965 16.560292680580726 13 20.43571979791311 25.621246668867382 38.002238608564866 15.940794924654645 14 18.326694751293648 28.698021760849272 36.86500796848458 16.11027551937249 15 18.049492050097612 26.375738642450052 40.244672920487865 15.33009638696448 16 20.396587870851523 25.45925360767948 39.181115238059846 14.963043283409155 17 20.454903186737994 24.276004695831247 36.61059578905487 18.658496328375893 18 20.53409615086123 24.514676658789273 37.86292676208444 17.088300428265057 19 22.22496704392176 25.562275510627924 35.39034643779226 16.822411007658054 20 23.532006199896376 25.790672610055815 34.674275895388774 16.00304529465904 21 22.628364744538473 25.52691467709602 36.10581579137217 15.738904786993334 22 21.667719658000074 24.06569791463993 35.96371661489155 18.30286581246844 23 19.045552623697333 27.36682574487295 36.132541367256415 17.4550802641733 24 18.785073902502475 26.29670963891506 37.87577034149711 17.04244611708535 25 18.884761940156572 27.467224278409454 36.26480290844222 17.383210872991757 26 18.76354041191272 29.114809576172814 35.02066996482499 17.100980047089482 27 18.702547073084887 27.634737346068334 36.23895178902863 17.423763791818146 28 17.96286620597385 27.30889300369239 38.087279500335576 16.640961289998184 29 18.839891392506345 25.687432092989702 37.45373578734967 18.018940727154277 30 19.376753011956005 26.29714686715039 36.683175676118815 17.642924444774792 31 20.702319714402517 26.71972795659198 34.873433356579305 17.7045189724262 32 21.224260920321715 26.849147514248173 34.7705754142191 17.156016151211013 33 21.045051997367885 27.40284242075785 33.84807849121281 17.704027090661462 34 19.78146239727869 28.436832543772013 33.5877637306062 18.1939413283431 35 20.00658028494164 28.794758507914924 32.851908610554254 18.346752596589184 36 21.32542460327003 29.423765977959327 31.33336029574118 17.917449123029467 37 20.881583290885757 29.895207322698486 31.28389885162004 17.939310534795716 38 20.61902773557311 30.201212433896558 30.646748005692707 18.533011824837626 39 20.825563423234748 29.665006656799882 30.30401572272734 19.20541419723803 40 21.39833241151047 28.850122533212954 30.80475135923328 18.946793696043304 41 19.546342913732683 29.211273055591384 30.773161619231047 20.46922241144489 42 20.73226984852228 29.604559853266206 29.811806036810246 19.851364261401272 43 20.866772184414124 29.188099959119164 30.188532815072133 19.756595041394583 44 20.556230830274558 29.997955957999856 30.708397186873533 18.737416024852052 45 20.444901590854933 30.060534249180744 29.782238477396394 19.71232568256793 46 20.430800980265705 30.41813229214716 29.738133079157986 19.41293364842915 47 20.441677032619413 29.162467453823233 30.47759533215136 19.918260181405994 48 20.900110837357655 28.6746847037888 31.02921340454324 19.395991054310304 49 20.5322379308611 28.240517066111092 31.25045089161768 19.976794111410126 50 20.065934017887006 29.46142225972669 30.70156549569658 19.771078226689724 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 878.0 1 1285.0 2 1692.0 3 22396.5 4 43101.0 5 33002.0 6 22903.0 7 23134.0 8 23365.0 9 23938.0 10 24511.0 11 24019.5 12 23528.0 13 23080.5 14 22633.0 15 21554.5 16 20476.0 17 19757.5 18 19039.0 19 18045.0 20 17051.0 21 17045.0 22 17039.0 23 17909.5 24 18780.0 25 20826.5 26 22873.0 27 27230.5 28 31588.0 29 36709.5 30 41831.0 31 46917.0 32 52003.0 33 57868.5 34 63734.0 35 71587.0 36 79440.0 37 86017.5 38 92595.0 39 99642.5 40 106690.0 41 115019.5 42 123349.0 43 127220.5 44 131092.0 45 131092.0 46 131092.0 47 131174.5 48 131257.0 49 127567.5 50 123878.0 51 116122.0 52 108366.0 53 97898.0 54 87430.0 55 78600.0 56 69770.0 57 62217.5 58 54665.0 59 49752.5 60 44840.0 61 38958.0 62 33076.0 63 26555.0 64 20034.0 65 15504.5 66 10975.0 67 8387.5 68 5800.0 69 4545.5 70 3291.0 71 2580.0 72 1869.0 73 1504.0 74 1139.0 75 1063.0 76 987.0 77 776.0 78 565.0 79 428.0 80 291.0 81 196.5 82 102.0 83 67.0 84 32.0 85 36.0 86 40.0 87 27.0 88 14.0 89 8.5 90 3.0 91 1.5 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1829708.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.984859575955 #Duplication Level Percentage of deduplicated Percentage of total 1 75.47306538545278 24.8946846350603 2 6.450428105429619 4.2553293052477885 3 3.1269324704209858 3.0942428532099084 4 2.074432659556924 2.7369947990104 5 1.5689803438604895 2.5876298159835915 6 1.2486090262201017 2.471111603708398 7 1.0359719073414093 2.391997152180346 8 0.8395269188025405 2.215334202154878 9 0.7552106946287528 2.241946684132996 >10 7.211828670429601 46.70225909333642 >50 0.1963537730558668 4.039085335221245 >100 0.017987636122939802 0.9677078410920995 >500 5.043065085030606E-4 0.11339170101302277 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 1.6810216950102018E-4 1.28828497864869 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 23234 1.2698201024425755 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.015248334706958706 0.0 2 0.0 0.0 0.0 0.05793274118055996 0.0 3 0.0 0.0 0.0 0.10766745294877653 0.0 4 0.0 0.0 0.0 0.1429189794218531 0.0 5 0.0 0.0 0.0 0.21555352001521555 0.0 6 0.0 0.0 0.0 0.40082898473417616 0.0 7 0.0 0.0 0.0 0.5028671241531436 0.0 8 0.0 0.0 0.0 0.7530709818178638 0.0 9 0.0 0.0 0.0 0.9243551430064251 0.0 10 0.0 0.0 0.0 1.1357003412566378 0.0 11 0.0 0.0 0.0 1.2628244506773758 0.0 12 0.0 0.0 0.0 1.3886915289215547 0.0 13 0.0 0.0 0.0 1.4891993695168846 0.0 14 0.0 0.0 0.0 1.5519416212860193 0.0 15 0.0 0.0 0.0 1.5998727665835204 0.0 16 0.0 0.0 0.0 1.6656209624705145 0.0 17 0.0 0.0 0.0 1.7368345112990706 0.0 18 0.0 0.0 0.0 1.8494207818952533 0.0 19 0.0 0.0 0.0 1.9074628301346443 0.0 20 0.0 0.0 0.0 1.9751785530806008 0.0 21 0.0 0.0 0.0 2.0419651660264915 0.0 22 0.0 0.0 0.0 2.110609998972514 0.0 23 0.0 0.0 0.0 2.190349498389907 0.0 24 0.0 0.0 0.0 2.2620002754537882 0.0 25 0.0 0.0 0.0 2.326163518987729 0.0 26 0.0 0.0 0.0 2.395081619580829 0.0 27 0.0 0.0 0.0 2.4748211189982228 0.0 28 0.0 0.0 0.0 2.550898831944769 0.0 29 0.0 0.0 0.0 2.632332590774047 0.0 30 0.0 0.0 0.0 2.740218657840486 0.0 31 0.0 0.0 0.0 2.829959753140938 0.0 32 0.0 0.0 0.0 2.9298664049126963 0.0 33 0.0 0.0 0.0 3.025783349037114 0.0 34 0.0 0.0 0.0 3.119076923749582 0.0 35 0.0 0.0 0.0 3.2182184261095212 0.0 36 0.0 0.0 0.0 3.3202565655284886 0.0 37 0.0 0.0 0.0 3.4213109414179748 0.0 38 0.0 0.0 0.0 3.5367938490731854 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCGTTG 20 7.857706E-4 44.0 1 CGCGTAG 20 7.857706E-4 44.0 1 TCGAACG 20 7.857706E-4 44.0 1 AATCGCG 25 4.443877E-5 44.0 1 CGTTTTT 22930 0.0 43.385956 1 TGTAGCG 160 0.0 39.875 1 CGTTAGG 335 0.0 38.74627 2 GCGATCG 150 0.0 38.13333 9 GTTTTTT 25760 0.0 38.038822 2 AGGGCGA 1745 0.0 37.570198 6 TGCGGGA 1285 0.0 37.151752 4 CGCGCAA 160 0.0 37.125 18 CGTAAGG 310 0.0 36.903225 2 TCGTTAG 90 0.0 36.666668 1 GTCGAAT 30 1.3013966E-4 36.666664 35 TATAGCG 60 1.9826984E-10 36.666664 1 TAGGGCG 705 0.0 36.51064 5 TAGGGAC 2055 0.0 36.506084 5 TAGGGAT 3605 0.0 36.49376 5 ACGGGAC 660 0.0 36.333332 5 >>END_MODULE