##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547206_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1358257 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.587547128415313 31.0 30.0 31.0 28.0 33.0 2 30.908507005669765 31.0 31.0 33.0 28.0 34.0 3 31.08315583869621 31.0 31.0 34.0 28.0 34.0 4 34.90961725211061 35.0 35.0 37.0 32.0 37.0 5 34.7013392899871 35.0 35.0 37.0 32.0 37.0 6 34.738687891908526 35.0 35.0 37.0 32.0 37.0 7 35.35943271413289 35.0 35.0 37.0 33.0 37.0 8 34.31892049884521 35.0 35.0 37.0 32.0 37.0 9 36.414594587033235 39.0 37.0 39.0 32.0 39.0 10 35.8402084436156 37.0 35.0 39.0 30.0 39.0 11 35.60142962635201 37.0 35.0 39.0 30.0 39.0 12 35.08953165711644 37.0 34.0 39.0 30.0 39.0 13 34.85478079627052 37.0 33.0 39.0 27.0 39.0 14 35.728639719876284 38.0 34.0 40.0 27.0 41.0 15 35.96102357653964 38.0 34.0 40.0 29.0 41.0 16 36.0640836012625 38.0 34.0 40.0 30.0 41.0 17 35.983569383408295 38.0 34.0 40.0 30.0 41.0 18 35.909241034649554 38.0 34.0 40.0 29.0 41.0 19 35.89815403123268 37.0 34.0 40.0 29.0 41.0 20 35.75710855898405 37.0 34.0 40.0 29.0 41.0 21 35.56672853517412 37.0 34.0 40.0 29.0 41.0 22 35.526199386419506 37.0 34.0 40.0 29.0 41.0 23 35.43328545334204 37.0 34.0 40.0 28.0 41.0 24 35.331786252528055 37.0 34.0 40.0 27.0 41.0 25 35.116315248145234 37.0 33.0 40.0 27.0 41.0 26 34.91720639024868 37.0 33.0 40.0 27.0 41.0 27 34.68615733252249 36.0 33.0 40.0 26.0 41.0 28 34.713702929563404 36.0 33.0 40.0 26.0 41.0 29 34.53714208724858 36.0 33.0 40.0 25.0 41.0 30 34.56374014637878 36.0 33.0 40.0 25.0 41.0 31 34.51178458863087 36.0 33.0 40.0 25.0 41.0 32 34.304155988152466 36.0 33.0 40.0 24.0 41.0 33 34.186299058278365 36.0 33.0 40.0 24.0 41.0 34 34.06649993337049 36.0 33.0 40.0 23.0 41.0 35 33.88812794633122 36.0 32.0 40.0 23.0 41.0 36 33.81787246448942 36.0 32.0 40.0 23.0 41.0 37 33.816519259609926 36.0 32.0 40.0 23.0 41.0 38 33.83456223674901 36.0 32.0 40.0 23.0 41.0 39 33.725324441545304 36.0 32.0 40.0 23.0 41.0 40 33.634103855161435 36.0 32.0 40.0 23.0 41.0 41 33.63713936316912 36.0 32.0 40.0 23.0 41.0 42 33.479525597880226 35.0 32.0 40.0 22.0 41.0 43 33.522309842688095 35.0 32.0 39.0 23.0 41.0 44 33.21623448287033 35.0 31.0 39.0 22.0 41.0 45 33.129523352355264 35.0 31.0 39.0 22.0 41.0 46 33.07534582925028 35.0 31.0 39.0 22.0 41.0 47 32.98450293280285 35.0 31.0 39.0 22.0 41.0 48 32.97905624635102 35.0 31.0 39.0 22.0 40.0 49 32.98266307480838 35.0 31.0 39.0 22.0 40.0 50 32.42660851370543 35.0 30.0 38.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 1.0 12 4.0 13 10.0 14 20.0 15 78.0 16 236.0 17 533.0 18 1208.0 19 2288.0 20 3868.0 21 5849.0 22 8693.0 23 12027.0 24 16599.0 25 21952.0 26 28152.0 27 33924.0 28 39358.0 29 46009.0 30 54686.0 31 64872.0 32 78029.0 33 94708.0 34 129327.0 35 140694.0 36 123721.0 37 141477.0 38 162200.0 39 147732.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.97806379794104 23.852628773494263 27.083607888639634 14.085699539925065 2 31.648428831951534 25.888620489347748 28.567568582381686 13.89538209631903 3 29.975475922450613 26.31180991520751 30.225428619178846 13.487285543163038 4 26.384918318109165 29.06187856937236 29.425727237187072 15.1274758753314 5 22.794655208844866 32.46800863165071 29.488528312388596 15.248807847115826 6 21.65157256690008 41.774862930947535 26.24260357207804 10.330960930074353 7 88.41552077405086 3.5953431493450796 6.380162222613246 1.6089738539908132 8 86.26173102733871 5.922811367804473 5.950125786209826 1.8653318186469865 9 83.30860801748122 5.136877630669306 8.306896264845314 3.2476180870041533 10 43.08161121201658 29.494565461470106 14.688899081690726 12.734924244822594 11 37.85130501812249 24.53828693686099 22.193369885080656 15.417038159935858 12 34.09987947788968 22.08860326138573 26.296128052349445 17.515389208375147 13 24.62332239038709 29.355563785056876 27.800997896568912 18.22011592798712 14 20.625698965659662 32.211650666994544 29.172976837225946 17.989673530119852 15 20.078232617244012 23.267393431434552 38.337221895414494 18.317152055906945 16 22.75438300704506 21.122364913267518 36.468356135841745 19.65489594384568 17 22.9529463128112 21.21314302079798 28.57979012808327 27.254120538307554 18 24.595566229366018 23.06956636336128 31.270370776664503 21.064496630608197 19 29.50884847271172 24.31388168807523 25.888694113117033 20.28857572609602 20 30.53052551910279 24.331551392704032 25.33923992293064 19.79868316526254 21 26.386611664802757 26.151015603085426 27.618263701199403 19.844109030912414 22 25.535447268079604 23.65944000288605 26.861779471778906 23.94333325725544 23 24.042578098253863 26.463254008630177 26.423055430599657 23.0711124625163 24 23.254288400501526 24.322274797773915 32.27297926681033 20.15045753491423 25 23.458741607810598 24.5156108159207 30.260620780897874 21.765026795370833 26 21.579126777922 28.51824065695962 27.014401545510164 22.88823101960822 27 21.223376724728826 28.245317344213944 28.242666888519626 22.288639042537607 28 20.929470637736454 26.819593051977648 31.67795196343549 20.57298434685041 29 22.408130420089865 25.356983251328725 30.8954785434568 21.33940778512461 30 23.48406818444521 26.633398539451665 29.228341911729515 20.654191364373606 31 27.725018166665073 25.50489340382564 26.123333065833638 20.646755363675652 32 28.924938358499162 24.92665231984816 26.32425233221695 19.824156989435725 33 28.038729047595556 25.192875869588743 25.336736714774894 21.431658368040804 34 23.125078685403423 26.52355187567596 28.227279520738712 22.124089918181905 35 23.308107375850078 26.1434323548489 28.59723896140421 21.951221307896812 36 27.412927008658894 27.015285030741605 25.162910995489074 20.40887696511043 37 23.59538732360665 30.005072677703854 26.05243337601058 20.34710662267892 38 24.247104929332224 29.848180425353966 24.278247783740486 21.626466861573327 39 23.85954940780721 28.85079922282749 24.6127941913791 22.6768571779862 40 25.1252156256143 24.822842805153957 26.57103920686586 23.480902362365885 41 21.462359479833346 25.02729601246303 27.13691149760318 26.373433010100445 42 23.030104023023625 26.081441141109522 25.1693898871863 25.719064948680554 43 22.535794036032943 25.61201598813774 27.00674467350435 24.845445302324965 44 22.709398884010906 26.642086144227488 27.920710145429034 22.72780482633257 45 21.8706769042972 28.958584421063172 26.012971035672926 23.157767638966707 46 23.48605602621595 28.144158285214065 26.87186592817118 21.497919760398805 47 22.797158417000613 27.239690279527363 26.77865823625426 23.184493067217765 48 23.238385666335606 25.674669815800694 28.77386238392293 22.313082133940778 49 23.01780885355275 25.606567829210526 28.767236244687123 22.6083870725496 50 22.29865187516059 28.44181918444006 26.85206113423306 22.407467806166284 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 816.0 1 1372.5 2 1929.0 3 6821.0 4 11713.0 5 8498.5 6 5284.0 7 5281.0 8 5278.0 9 5577.0 10 5876.0 11 5807.5 12 5739.0 13 5692.5 14 5646.0 15 5542.0 16 5438.0 17 5674.5 18 5911.0 19 5603.5 20 5296.0 21 6109.5 22 6923.0 23 7656.0 24 8389.0 25 9044.5 26 9700.0 27 11170.5 28 12641.0 29 15206.0 30 17771.0 31 20997.0 32 24223.0 33 27083.5 34 29944.0 35 34600.0 36 39256.0 37 43174.0 38 47092.0 39 51984.5 40 56877.0 41 67759.0 42 78641.0 43 86966.5 44 95292.0 45 95615.5 46 95939.0 47 94436.0 48 92933.0 49 93501.0 50 94069.0 51 92182.0 52 90295.0 53 83651.0 54 77007.0 55 74087.5 56 71168.0 57 71659.0 58 72150.0 59 69673.0 60 67196.0 61 62928.5 62 58661.0 63 53365.0 64 48069.0 65 40527.0 66 32985.0 67 27966.5 68 22948.0 69 20586.0 70 18224.0 71 15395.5 72 12567.0 73 10284.5 74 8002.0 75 6237.5 76 4473.0 77 3902.5 78 3332.0 79 2291.0 80 1250.0 81 987.5 82 725.0 83 539.5 84 354.0 85 250.5 86 147.0 87 101.0 88 55.0 89 38.0 90 21.0 91 15.0 92 9.0 93 6.0 94 3.0 95 1.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1358257.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 24.93587051329914 #Duplication Level Percentage of deduplicated Percentage of total 1 78.092555255669 19.473058459080203 2 6.573281117737967 3.278209735988564 3 2.51867878544665 1.8841634417547362 4 1.319226066604815 1.3158420149850645 5 0.9154687798136816 1.1414005476200961 6 0.6836805235759723 1.0228901405013002 7 0.5563716252141304 0.9711527562529348 8 0.4821118647281522 0.9617503225429114 9 0.4174614567450239 0.936878834671843 >10 6.984221060146778 43.26500884596462 >50 1.379232471406149 22.50763270924896 >100 0.07654240655234093 2.5645137446248247 >500 5.842931796754683E-4 0.0858164699234268 >1k 2.921465898377342E-4 0.11335350356608836 >5k 2.921465898377342E-4 0.4783284732743806 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6566 0.48341366913625333 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 1556 0.11455858501005334 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.009865585084413332 0.0 2 0.0 0.0 0.0 0.043143528801986665 0.0 3 0.0 0.0 0.0 0.07156230374664 0.0 4 0.0 0.0 0.0 0.1148530800872 0.0 5 0.0 0.0 0.0 0.19480849353252 0.0 6 0.0 0.0 0.0 0.3581060138103466 0.0 7 0.0 0.0 0.0 0.43887128871782 0.0 8 0.0 0.0 0.0 0.6572393884220733 0.0 9 0.0 0.0 0.0 0.7662025669663399 0.0 10 0.0 0.0 0.0 0.9353163650178132 0.0 11 0.0 0.0 0.0 1.0536297622614865 0.0 12 0.0 0.0 0.0 1.1621511981900332 0.0 13 7.362376928666666E-5 0.0 0.0 1.2167800350007398 0.0 14 7.362376928666666E-5 0.0 0.0 1.2456405525611132 0.0 15 7.362376928666666E-5 0.0 0.0 1.2745746938907732 0.0 16 7.362376928666666E-5 0.0 0.0 1.3336945806279665 0.0 17 7.362376928666666E-5 0.0 0.0 1.3936979525966 0.0 18 7.362376928666666E-5 0.0 0.0 1.4891879813614066 0.0 19 7.362376928666666E-5 0.0 0.0 1.5293129356226398 0.0 20 7.362376928666666E-5 0.0 0.0 1.5770947618896867 0.0 21 7.362376928666666E-5 0.0 0.0 1.6325334601625465 0.0 22 7.362376928666666E-5 0.0 0.0 1.6906226141297265 0.0 23 7.362376928666666E-5 0.0 0.0 1.7602706998749131 0.0 24 1.4724753857333332E-4 0.0 0.0 1.8141632989927532 0.0 25 1.4724753857333332E-4 0.0 0.0 1.8618715014905132 0.0 26 1.4724753857333332E-4 0.0 0.0 1.9114202982204398 0.0 27 1.4724753857333332E-4 0.0 0.0 1.9645030358761266 0.0 28 1.4724753857333332E-4 0.0 0.0 2.016481416992513 0.0 29 1.4724753857333332E-4 0.0 0.0 2.0780308881161664 0.0 30 1.4724753857333332E-4 0.0 0.0 2.1555567171750267 0.0 31 1.4724753857333332E-4 0.0 0.0 2.2247630603044932 0.0 32 1.4724753857333332E-4 0.0 0.0 2.2951473837425467 0.0 33 1.4724753857333332E-4 0.0 0.0 2.366783311258473 0.0 34 1.4724753857333332E-4 0.0 0.0 2.4424685460851667 0.0 35 1.4724753857333332E-4 0.0 0.0 2.5257370291483867 0.0 36 1.4724753857333332E-4 0.0 0.0 2.6026002442836664 0.0 37 1.4724753857333332E-4 0.0 0.0 2.6783591028796465 0.0 38 1.4724753857333332E-4 0.0 0.0 2.7693580817179666 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATCACG 20 7.856987E-4 44.000004 1 CTCCGAT 20 7.856987E-4 44.000004 40 ATCGACG 30 2.528057E-6 44.0 40 CGTTTTT 4215 0.0 40.39858 1 GCGTATG 55 7.8216544E-11 40.0 1 CATACGA 205 0.0 39.707317 18 TATAGCG 100 0.0 39.6 1 CGAATAT 85 0.0 38.82353 14 GTATGCG 80 0.0 38.500004 1 CGACGGT 200 0.0 38.5 28 CGGTCTA 195 0.0 38.358974 31 CTATGCG 70 0.0 37.714287 1 CGTTAGG 205 0.0 37.560974 2 CGACAAT 200 0.0 37.399998 20 ACGGTCT 200 0.0 37.399998 30 GTAGGGC 660 0.0 37.333332 4 TAACGGG 325 0.0 37.23077 3 CTAACGG 65 1.0913936E-11 37.23077 2 TCGACAA 195 0.0 37.23077 19 TAGGGCG 665 0.0 36.721806 5 >>END_MODULE