##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547204_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 737821 Sequences flagged as poor quality 0 Sequence length 50 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.62252904159681 31.0 30.0 31.0 27.0 34.0 2 30.96760325336362 31.0 31.0 33.0 28.0 34.0 3 31.02493829804248 31.0 31.0 34.0 28.0 34.0 4 34.888472949401006 35.0 35.0 37.0 32.0 37.0 5 34.7268849761663 35.0 35.0 37.0 32.0 37.0 6 34.764852179593696 35.0 35.0 37.0 32.0 37.0 7 35.45133033621976 35.0 35.0 37.0 35.0 37.0 8 34.426389327492714 36.0 35.0 37.0 32.0 37.0 9 36.52910258721289 39.0 37.0 39.0 32.0 39.0 10 35.9573162054211 38.0 35.0 39.0 30.0 39.0 11 35.71909853473946 37.0 35.0 39.0 30.0 39.0 12 35.59500746115928 37.0 35.0 39.0 30.0 39.0 13 35.58233907682216 37.0 35.0 39.0 30.0 39.0 14 36.549272791097025 38.0 35.0 40.0 30.0 41.0 15 36.62632942136372 38.0 35.0 40.0 30.0 41.0 16 36.620421484343765 38.0 35.0 40.0 30.0 41.0 17 36.50544915365651 38.0 35.0 40.0 30.0 41.0 18 36.28720380688541 38.0 35.0 40.0 30.0 41.0 19 36.1370115515823 37.0 34.0 40.0 30.0 41.0 20 35.88566332484437 37.0 34.0 40.0 30.0 41.0 21 35.757748830678445 37.0 34.0 40.0 29.0 41.0 22 35.70632172301954 37.0 34.0 40.0 29.0 41.0 23 35.55868835395035 37.0 34.0 40.0 29.0 41.0 24 35.39916592235786 37.0 34.0 40.0 28.0 41.0 25 35.22298362339917 37.0 33.0 40.0 27.0 41.0 26 35.03242927485122 37.0 33.0 40.0 27.0 41.0 27 34.84335631542068 36.0 33.0 40.0 26.0 41.0 28 34.80672412414393 36.0 33.0 40.0 26.0 41.0 29 34.59947331398808 36.0 33.0 40.0 25.0 41.0 30 34.501242171204126 36.0 33.0 40.0 25.0 41.0 31 34.3376347379649 36.0 33.0 40.0 24.0 41.0 32 33.88967649335002 36.0 33.0 40.0 22.0 41.0 33 33.4578685074022 36.0 32.0 40.0 20.0 41.0 34 33.07593576219706 36.0 31.0 40.0 18.0 41.0 35 32.73194311357362 36.0 31.0 40.0 15.0 41.0 36 32.612575407856376 36.0 31.0 40.0 15.0 41.0 37 32.583808267859006 36.0 31.0 40.0 15.0 41.0 38 32.54322660916401 36.0 31.0 40.0 14.0 41.0 39 32.42156701964298 36.0 30.0 40.0 12.0 41.0 40 32.34763851936987 36.0 30.0 40.0 12.0 41.0 41 32.32146685984812 36.0 30.0 40.0 12.0 41.0 42 32.156542033907954 36.0 30.0 40.0 10.0 41.0 43 32.19559215582099 36.0 30.0 40.0 10.0 41.0 44 31.89794137060344 35.0 30.0 40.0 10.0 41.0 45 31.840530426756626 35.0 30.0 39.0 10.0 41.0 46 31.767954558083872 35.0 29.0 39.0 10.0 41.0 47 31.716134401162343 35.0 29.0 39.0 10.0 41.0 48 31.679518473993014 35.0 29.0 39.0 10.0 41.0 49 31.672065446768254 35.0 29.0 39.0 10.0 41.0 50 31.159549538438185 35.0 28.0 39.0 10.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 0.0 13 2.0 14 18.0 15 45.0 16 158.0 17 371.0 18 878.0 19 1798.0 20 3010.0 21 4375.0 22 6234.0 23 8774.0 24 11973.0 25 16859.0 26 22752.0 27 25980.0 28 25498.0 29 26116.0 30 28254.0 31 32040.0 32 37522.0 33 44707.0 34 57125.0 35 64530.0 36 65947.0 37 76330.0 38 89803.0 39 86720.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.750169756621187 22.119186089851063 24.819027921406413 23.31161623212134 2 39.10270919369332 23.262417307178843 25.77766151952845 11.857211979599388 3 26.220316309782454 23.916776562336935 37.44539664769639 12.417510480184218 4 23.026452215374732 26.407895682015013 37.07755675156982 13.488095351040426 5 20.714373811534234 29.825526787662593 36.46724612067154 12.99285328013163 6 19.268494661984413 38.06682108533099 33.57196393163112 9.09272032105348 7 80.94483621366157 2.837409073474461 15.073168153251263 1.1445865596126974 8 79.02878882547392 5.165344982048492 14.542822717163107 1.2630434753144733 9 76.05001755168259 4.9727508433617365 16.478929171167533 2.498302433788141 10 33.048801809653014 32.760927108336574 22.79536635579632 11.394904726214081 11 25.197168418898354 25.045776685673083 34.7168215597008 15.04023333572777 12 24.018562767934228 22.247130401547256 36.815704622123796 16.91860220839472 13 21.57759131279809 23.79208507212454 37.372072630082364 17.258250984995005 14 19.223632832353648 26.33714681474233 36.92331879954623 17.515901553357793 15 18.74031777355212 24.40795260639098 40.2376728230831 16.61405679697379 16 21.392722625135367 23.061284512097107 38.91960245100099 16.62639041176654 17 21.37591638080239 22.854865882104196 36.443392096457 19.325825640636417 18 21.77506468371055 23.19803854864527 37.30118822858119 17.725708539063 19 23.787205839898835 24.427469535293792 34.254514306315485 17.53081031849188 20 25.02693742791273 24.1240083977008 34.24218069152274 16.60687348286373 21 24.020595781361603 24.00148545514427 34.992227111996 16.98569165149813 22 22.388763670321122 23.063859662438453 35.607959112033946 18.939417555206482 23 20.83269519300752 25.36983902599682 35.42946053311034 18.36800524788533 24 20.81100971644884 24.0616626525946 37.21173563777664 17.915591993179916 25 21.107016471474786 25.14173491944523 35.14592292710563 18.605325681974357 26 19.593641276136083 26.745918047873403 34.60378601313869 19.05665466285183 27 19.794503002760834 25.222648853854796 35.9465236148063 19.03632452857807 28 19.489957591339905 25.824149759901115 36.80621722612937 17.879675422629607 29 20.43354689009936 24.76860918840749 36.244698917488115 18.553145004005035 30 20.867663023958386 24.51936174221119 36.06470946205109 18.548265771779334 31 22.26651179622158 25.303833856721347 34.07696446699131 18.35268988006576 32 22.595724437228 25.477317669190764 33.640950853933404 18.286007039647828 33 22.391474354890956 26.110669118932638 32.79182891243269 18.706027613743714 34 21.217476867695552 27.247123624835833 32.76472206673434 18.77067744073427 35 21.305303047758194 27.05005685660885 32.21472416751489 19.429915928118067 36 22.235067855211494 28.3971315535882 30.13833978702151 19.229460804178792 37 22.261497029767384 28.945638576294254 29.890583217338623 18.902281176599743 38 22.1021087770611 28.903216362776334 29.60352172139313 19.39115313876943 39 22.203894982658394 28.246688559962372 29.279459381069394 20.269957076309836 40 22.649260457482235 27.246852556378855 30.08426162985331 20.0196253562856 41 20.609741387138612 27.710650686277567 30.383521206363064 21.296086720220757 42 21.663791082118834 28.347526025960224 29.08469669472677 20.903986197194172 43 21.507384582439375 27.862449022188308 29.499024831226002 21.131141564146315 44 21.498981460272883 28.05084159979182 30.014597036408556 20.435579903526737 45 21.367784327092888 28.07686417166223 29.47517080701146 21.080180694233423 46 21.08519546068762 28.926528250076917 29.589561695858478 20.398714593376983 47 21.16800687429607 28.103157811989625 30.340014719017216 20.388820594697087 48 21.84256072949943 26.79281289093154 30.745939733349957 20.61868664621907 49 21.405327308385097 27.3395579686672 30.621925914280023 20.633188808667686 50 20.459840530426757 27.880204006120724 30.851791965802004 20.808163497650515 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 398.0 1 691.0 2 984.0 3 11156.5 4 21329.0 5 15584.0 6 9839.0 7 9904.0 8 9969.0 9 10075.5 10 10182.0 11 10022.5 12 9863.0 13 9619.5 14 9376.0 15 8819.5 16 8263.0 17 7781.5 18 7300.0 19 6988.5 20 6677.0 21 6582.0 22 6487.0 23 6515.5 24 6544.0 25 7449.5 26 8355.0 27 9118.5 28 9882.0 29 11131.5 30 12381.0 31 14629.5 32 16878.0 33 19255.5 34 21633.0 35 23775.0 36 25917.0 37 27870.5 38 29824.0 39 32370.0 40 34916.0 41 37561.0 42 40206.0 43 42540.0 44 44874.0 45 46081.0 46 47288.0 47 47810.0 48 48332.0 49 48061.5 50 47791.0 51 44554.0 52 41317.0 53 39018.0 54 36719.0 55 34553.0 56 32387.0 57 31038.0 58 29689.0 59 28646.0 60 27603.0 61 25423.0 62 23243.0 63 20205.5 64 17168.0 65 14254.0 66 11340.0 67 9476.0 68 7612.0 69 6481.5 70 5351.0 71 4681.0 72 4011.0 73 3307.5 74 2604.0 75 2106.5 76 1609.0 77 1244.0 78 879.0 79 659.5 80 440.0 81 321.5 82 203.0 83 150.5 84 98.0 85 67.0 86 36.0 87 25.5 88 15.0 89 9.5 90 4.0 91 4.0 92 4.0 93 2.0 94 0.0 95 0.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 737821.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.71096848399145 #Duplication Level Percentage of deduplicated Percentage of total 1 72.580677480091 33.17733060839188 2 8.31919479993369 7.60556902623909 3 4.7318869057799375 6.488973996597556 4 3.3480288736041834 6.121665692992569 5 2.5025997539756877 5.719812924101371 6 1.87909991744851 5.153728626285586 7 1.452375356299098 4.647263889709975 8 1.140642058344526 4.171188254440141 9 0.9021398557610014 3.7113917863359354 >10 3.11412265963745 20.296698583718236 >50 0.02155519314575681 0.641799759847479 >100 0.007381871133761799 0.610077921572459 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 2.952748453449843E-4 1.6544989297677777 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12258 1.6613785728516808 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.01097827250783049 0.0 2 1.3553422849173444E-4 0.0 0.0 0.04770804842909052 0.0 3 1.3553422849173444E-4 0.0 0.0 0.10029532908388349 0.0 4 1.3553422849173444E-4 0.0 0.0 0.14840998019844923 0.0 5 1.3553422849173444E-4 0.0 0.0 0.23271227032030803 0.0 6 1.3553422849173444E-4 0.0 0.0 0.46366259567022355 0.0 7 1.3553422849173444E-4 0.0 0.0 0.6096329597558215 0.0 8 1.3553422849173444E-4 0.0 0.0 0.8928994973035466 0.0 9 1.3553422849173444E-4 0.0 0.0 1.0905084024444953 0.0 10 1.3553422849173444E-4 0.0 0.0 1.3092606472301547 0.0 11 1.3553422849173444E-4 0.0 0.0 1.429072905216848 0.0 12 1.3553422849173444E-4 0.0 0.0 1.5375002880102355 0.0 13 1.3553422849173444E-4 0.0 0.0 1.6284437553281894 0.0 14 1.3553422849173444E-4 0.0 0.0 1.678726954098623 0.0 15 1.3553422849173444E-4 0.0 0.0 1.7200648937886018 0.0 16 1.3553422849173444E-4 0.0 0.0 1.7696704214165766 0.0 17 1.3553422849173444E-4 0.0 0.0 1.8199536201870101 0.0 18 1.3553422849173444E-4 0.0 0.0 1.905746786822278 0.0 19 1.3553422849173444E-4 0.0 0.0 1.9549457117647777 0.0 20 1.3553422849173444E-4 0.0 0.0 2.0122766904167815 0.0 21 1.3553422849173444E-4 0.0 0.0 2.068523395240851 0.0 22 1.3553422849173444E-4 0.0 0.0 2.1244990316079373 0.0 23 1.3553422849173444E-4 0.0 0.0 2.198229651907441 0.0 24 1.3553422849173444E-4 0.0 0.0 2.2536631513605605 0.0 25 1.3553422849173444E-4 0.0 0.0 2.3088255823566963 0.0 26 1.3553422849173444E-4 0.0 0.0 2.3648012187237826 0.0 27 1.3553422849173444E-4 0.0 0.0 2.424978416174113 0.0 28 1.3553422849173444E-4 0.0 0.0 2.4893571747076866 0.0 29 1.3553422849173444E-4 0.0 0.0 2.5609192473513223 0.0 30 1.3553422849173444E-4 0.0 0.0 2.651862714669276 0.0 31 1.3553422849173444E-4 0.0 0.0 2.7270842114821887 0.0 32 1.3553422849173444E-4 0.0 0.0 2.812741843888965 0.0 33 9.487395994421411E-4 0.0 0.0 2.8975862709247906 0.0 34 9.487395994421411E-4 0.0 0.0 2.984328177159501 0.0 35 9.487395994421411E-4 0.0 0.0 3.0752716444774544 0.0 36 9.487395994421411E-4 0.0 0.0 3.164182098368032 0.0 37 9.487395994421411E-4 0.0 0.0 3.2690855912206347 0.0 38 9.487395994421411E-4 0.0 0.0 3.372091604874353 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGTATG 20 7.8546465E-4 44.0 1 ACGAACG 20 7.8546465E-4 44.0 1 CGTTTTT 9535 0.0 42.8925 1 GTTTTTT 10520 0.0 38.625477 2 GCCGATA 35 7.2866624E-6 37.714287 9 AGTACGG 35 7.2866624E-6 37.714287 2 GGCACCG 305 0.0 37.508198 8 GACCGAT 500 0.0 37.4 9 GTTACGG 65 1.0913936E-11 37.23077 2 AACGTAG 30 1.3006433E-4 36.666668 1 GCGCGAC 180 0.0 36.666668 9 TGCGACG 30 1.3006433E-4 36.666668 1 TTACGGG 150 0.0 36.666668 3 AATCGTT 30 1.3006433E-4 36.666668 22 ATAGGGA 910 0.0 36.021976 4 TACGAAT 55 3.421519E-9 36.000004 12 CGAATAT 55 3.421519E-9 36.000004 14 CGACCCG 190 0.0 35.894737 32 TAGGGAT 1065 0.0 35.737087 5 TGGGCGA 425 0.0 35.717648 6 >>END_MODULE