##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547203_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1822854 Sequences flagged as poor quality 0 Sequence length 50 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.539846306945044 31.0 30.0 31.0 27.0 34.0 2 30.8798302003342 31.0 31.0 33.0 28.0 34.0 3 30.975406697409667 31.0 31.0 34.0 28.0 34.0 4 34.833644384026364 35.0 35.0 37.0 32.0 37.0 5 34.65743060058568 35.0 35.0 37.0 31.0 37.0 6 34.68803700131772 35.0 35.0 37.0 31.0 37.0 7 35.348171603430664 35.0 35.0 37.0 33.0 37.0 8 34.30747059281764 35.0 35.0 37.0 32.0 37.0 9 36.39445726317083 39.0 37.0 39.0 32.0 39.0 10 35.82401827025094 37.0 35.0 39.0 30.0 39.0 11 35.59654366175239 37.0 35.0 39.0 30.0 39.0 12 35.34249753408666 37.0 34.0 39.0 30.0 39.0 13 35.26928486867297 37.0 34.0 39.0 30.0 39.0 14 36.1659035775767 38.0 34.0 40.0 29.0 41.0 15 36.28273026803024 38.0 34.0 40.0 30.0 41.0 16 36.30830719300613 38.0 34.0 40.0 30.0 41.0 17 36.1793873782541 38.0 34.0 40.0 30.0 41.0 18 36.02424988507033 38.0 34.0 40.0 29.0 41.0 19 35.913435195577925 37.0 34.0 40.0 29.0 41.0 20 35.683330096650636 37.0 34.0 40.0 29.0 41.0 21 35.51358364410973 37.0 34.0 40.0 29.0 41.0 22 35.47759118393464 37.0 34.0 40.0 28.0 41.0 23 35.33954063243683 37.0 33.0 40.0 28.0 41.0 24 35.18574444250609 37.0 33.0 40.0 27.0 41.0 25 34.96775221712765 36.0 33.0 40.0 27.0 41.0 26 34.778104006135436 36.0 33.0 40.0 26.0 41.0 27 34.570534447629925 36.0 33.0 40.0 25.0 41.0 28 34.535612835696114 36.0 33.0 40.0 25.0 41.0 29 34.3051478615402 36.0 33.0 39.0 24.0 41.0 30 34.24459611137261 36.0 33.0 39.0 24.0 41.0 31 34.111070332566406 36.0 33.0 40.0 24.0 41.0 32 33.71176298266345 36.0 32.0 40.0 22.0 41.0 33 33.366238327370155 36.0 31.0 40.0 21.0 41.0 34 33.03648674002416 36.0 31.0 40.0 18.0 41.0 35 32.74624517377695 36.0 31.0 40.0 17.0 41.0 36 32.63020132166372 36.0 31.0 40.0 16.0 41.0 37 32.61375458484333 36.0 31.0 40.0 15.0 41.0 38 32.58580445828355 36.0 31.0 40.0 15.0 41.0 39 32.45761152566251 35.0 30.0 40.0 15.0 41.0 40 32.36053024542832 35.0 30.0 40.0 15.0 41.0 41 32.33875121101306 35.0 30.0 40.0 15.0 41.0 42 32.17062145404953 35.0 30.0 39.0 14.0 41.0 43 32.18824491703669 35.0 30.0 39.0 15.0 41.0 44 31.87380722756732 35.0 30.0 39.0 12.0 41.0 45 31.792833106765546 35.0 29.0 39.0 12.0 41.0 46 31.73153911393891 35.0 29.0 39.0 12.0 41.0 47 31.655869312627342 35.0 29.0 39.0 12.0 40.0 48 31.639501572808353 35.0 29.0 39.0 12.0 40.0 49 31.630361510027683 35.0 29.0 39.0 12.0 40.0 50 31.10295777939429 35.0 28.0 38.0 10.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 3.0 11 2.0 12 5.0 13 22.0 14 40.0 15 133.0 16 437.0 17 1201.0 18 2482.0 19 4811.0 20 7723.0 21 11558.0 22 16301.0 23 22257.0 24 30371.0 25 41107.0 26 53827.0 27 61296.0 28 64309.0 29 66968.0 30 73642.0 31 84376.0 32 98315.0 33 117281.0 34 150542.0 35 164833.0 36 162190.0 37 185260.0 38 210338.0 39 191223.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.037563074168304 22.15300841427783 24.82502712778972 20.984401383764144 2 37.54754906317236 23.664539233531595 26.23567219316522 12.552239510130816 3 27.589044432521746 24.684642873208716 34.77958190837006 12.946730785899474 4 24.46537133527973 26.948729848907266 34.38421288814134 14.201685927671662 5 21.487074664235315 30.34966047747104 34.191054247899174 13.97221061039447 6 19.897314869978615 38.58893800600597 31.939968862015277 9.573778262000138 7 82.20779064039138 3.2576937044875782 13.077240415304791 1.4572752398162443 8 80.05440918471804 5.5921648140772655 12.651644070232724 1.7017819309719813 9 77.08686488330936 5.070674886743535 14.902126006800327 2.9403342231467797 10 36.588503522498236 29.706438365332605 20.988351233834415 12.716706878334744 11 29.270857677027344 24.595551810512525 30.334354808448726 15.799235704011402 12 26.790735846096286 21.928964140847267 33.67378846577949 17.606511547276963 13 23.50572234528931 24.091945926552537 34.48416603853079 17.918165689627365 14 20.274086679459792 26.53125264009076 35.23578959148676 17.95887108896269 15 20.0345173008919 22.89272755799422 38.93849973722525 18.134255403888627 16 22.80155185220539 21.622137593027198 37.312203829818515 18.2641067249489 17 22.182961443977412 21.494700069232096 34.79154117663839 21.530797310152103 18 23.06108991723967 22.1410491460095 35.487702251524254 19.310158685226572 19 26.032309773574845 23.89417912789505 31.694749003485747 18.378762095044365 20 26.88909808465187 23.674578435793542 31.321268735729795 18.115054743824793 21 25.154620172542618 24.268921153312334 32.85013500806976 17.726323666075285 22 24.032039867153376 22.374748608500735 32.86736074309846 20.72585078124743 23 22.485015256295895 24.928052383789375 32.59405306184697 19.992879298067756 24 22.492750379350184 23.619993702183496 35.04987234304009 18.837383575426227 25 22.77988253584763 24.236280031203815 32.965997276797815 20.01784015615074 26 20.603789442270198 25.59579648178077 32.605847753029046 21.194566322919993 27 20.859706811406728 24.496311827496882 33.62929779346015 21.014683567636244 28 20.7096125087363 24.92969815465199 34.70305356325849 19.657635773353213 29 21.759778896170513 24.145598056673766 34.23088190277444 19.863741144381283 30 21.9662134213711 24.306499588008695 33.87413363878841 19.8531533518318 31 24.445512366870854 24.008121330616714 31.75460020385615 19.791766098656282 32 24.9233893663453 24.1640855493638 31.036714953583775 19.875810130707123 33 24.558412248046196 24.972159042907442 30.05369601734423 20.415732691702132 34 21.906087925856927 26.116518382711945 31.26580625765969 20.711587433771435 35 22.340461715529603 26.27933998005326 30.52208240484427 20.85811589957287 36 23.847932966655584 27.654491253825046 27.925604573926382 20.571971205592988 37 22.860251012971965 28.64096630887608 27.973441646999703 20.525341031152248 38 23.120611963437554 28.651170088224294 27.41256293702074 20.815655011317418 39 22.802539314722956 27.705455291537334 27.394898329762015 22.0971070639777 40 23.35875500725785 25.99895548409253 28.883827229169206 21.75846227948042 41 21.21810084625538 26.39021007716471 29.08000311599283 23.31168596058708 42 22.45138667166981 27.111002855961036 27.463965846963056 22.973644625406095 43 21.779583005550638 26.469097360512688 28.788811391367602 22.962508242569072 44 21.92473999563322 26.61705216106172 29.40032498488634 22.057882858418722 45 21.524543380874167 27.27371473524484 28.983506084414877 22.218235799466115 46 22.570101609893058 27.489255859218563 28.472768526716898 21.46787400417148 47 21.575068546356427 27.099263023807723 29.152417033947863 22.173251395887984 48 22.030179048898045 26.257670663695503 29.895592296475748 21.816557990930704 49 22.44233493192543 25.79866517011236 30.151290229497263 21.607709668464945 50 21.014903003751257 26.434261877254023 30.337207477943927 22.213627641050792 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1148.0 1 1980.5 2 2813.0 3 22839.0 4 42865.0 5 31418.0 6 19971.0 7 19894.5 8 19818.0 9 19970.5 10 20123.0 11 20223.5 12 20324.0 13 19656.0 14 18988.0 15 18257.0 16 17526.0 17 16525.0 18 15524.0 19 14689.5 20 13855.0 21 13446.5 22 13038.0 23 13593.5 24 14149.0 25 15332.5 26 16516.0 27 18203.0 28 19890.0 29 22294.0 30 24698.0 31 29355.0 32 34012.0 33 38779.5 34 43547.0 35 48777.5 36 54008.0 37 57897.0 38 61786.0 39 68422.0 40 75058.0 41 81205.5 42 87353.0 43 94946.5 44 102540.0 45 105517.0 46 108494.0 47 111606.5 48 114719.0 49 119437.5 50 124156.0 51 120186.0 52 116216.0 53 109161.0 54 102106.0 55 97505.0 56 92904.0 57 91195.0 58 89486.0 59 85300.0 60 81114.0 61 75867.5 62 70621.0 63 62791.5 64 54962.0 65 47232.5 66 39503.0 67 33833.0 68 28163.0 69 25177.0 70 22191.0 71 18963.5 72 15736.0 73 12963.0 74 10190.0 75 8089.5 76 5989.0 77 4639.5 78 3290.0 79 2583.5 80 1877.0 81 1345.5 82 814.0 83 601.5 84 389.0 85 311.0 86 233.0 87 171.5 88 110.0 89 68.0 90 26.0 91 18.5 92 11.0 93 6.5 94 2.0 95 1.5 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1822854.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.896238486422916 #Duplication Level Percentage of deduplicated Percentage of total 1 76.4163409684771 24.37393835790356 2 5.7035533885006675 3.6384379819932566 3 2.6674169313160814 2.5524169975194035 4 1.7478399028292295 2.2299807350690943 5 1.3394057237806842 2.1361002197894305 6 1.1530488687865044 2.20667530231887 7 0.9620247146992021 2.1479478810915107 8 0.8370580539070114 2.135920265151927 9 0.7766785397122549 2.22958115369539 >10 8.240887592291314 50.707669887583506 >50 0.1292829697047644 2.601614820488861 >100 0.024885146215620352 1.3959157096347274 >500 0.0014019553595713574 0.28535101030391974 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 1.7524441994641967E-4 1.3584496774566428 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 24303 1.3332389758038767 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.010423215463224153 0.0 2 0.0 0.0 0.0 0.0392242055589751 0.0 3 0.0 0.0 0.0 0.0803684771243336 0.0 4 0.0 0.0 0.0 0.12452999527115172 0.0 5 0.0 0.0 0.0 0.2028138293028405 0.0 6 0.0 0.0 0.0 0.4292718999985737 0.0 7 0.0 0.0 0.0 0.5770072644325875 0.0 8 0.0 0.0 0.0 0.9350172860799604 0.0 9 0.0 0.0 0.0 1.152588194117576 0.0 10 0.0 0.0 0.0 1.4082312681103368 0.0 11 0.0 0.0 0.0 1.543403914959728 0.0 12 0.0 0.0 0.0 1.6639292011318514 0.0 13 0.0 0.0 0.0 1.7427616254510783 0.0 14 0.0 0.0 0.0 1.7896660950355872 0.0 15 0.0 0.0 0.0 1.8226912303453815 0.0 16 0.0 0.0 0.0 1.8700345721599207 0.0 17 0.0 0.0 0.0 1.9205048786134271 0.0 18 0.0 0.0 0.0 2.0119548795460305 0.0 19 0.0 0.0 0.0 2.054360908772727 0.0 20 0.0 0.0 0.0 2.1037888936799107 0.0 21 0.0 0.0 0.0 2.15875764049123 0.0 22 0.0 0.0 0.0 2.2177859554303305 0.0 23 0.0 0.0 0.0 2.282135596158551 0.0 24 0.0 0.0 0.0 2.336281457538563 0.0 25 0.0 0.0 0.0 2.390756473091098 0.0 26 0.0 0.0 0.0 2.4435857177810183 0.0 27 0.0 0.0 0.0 2.50003565836869 0.0 28 0.0 0.0 0.0 2.5618069247454813 0.0 29 0.0 0.0 0.0 2.6295578252564384 0.0 30 0.0 0.0 0.0 2.717771143492567 0.0 31 0.0 0.0 0.0 2.7865095065210927 0.0 32 0.0 0.0 0.0 2.8725833226358226 0.0 33 0.0 0.0 0.0 2.955365597025324 0.0 34 0.0 0.0 0.0 3.0363923824947032 0.0 35 0.0 0.0 0.0 3.124331405587063 0.0 36 0.0 0.0 0.0 3.2110086710180847 0.0 37 0.0 0.0 0.0 3.30075804205932 0.0 38 0.0 0.0 0.0 3.4108052537394657 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGCGTA 20 7.857699E-4 44.0 23 CGTTTTT 18950 0.0 42.25857 1 CGTTAGG 215 0.0 37.860466 2 CTATGCG 70 0.0 37.714287 1 TACGGGA 560 0.0 37.32143 4 GTTTTTT 21740 0.0 37.068077 2 GGGCGAT 4025 0.0 36.785095 7 GACCGAT 1255 0.0 36.63745 9 ACGGGAT 640 0.0 36.4375 5 ACCCGCT 850 0.0 35.97647 34 TCACGAC 160 0.0 35.75 25 GTATACG 80 0.0 35.75 1 CGTAAGG 265 0.0 35.698112 2 GCCAGTA 980 0.0 35.69388 25 TAGGGAC 1495 0.0 35.61204 5 TAGGGCG 960 0.0 35.520832 5 AGGGCGA 2270 0.0 35.471367 6 CTATACG 50 5.948823E-8 35.2 1 GCGCGAC 865 0.0 35.098267 9 TATACGG 195 0.0 34.974358 2 >>END_MODULE