##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547202_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3078332 Sequences flagged as poor quality 0 Sequence length 50 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.670184047724547 31.0 30.0 31.0 28.0 34.0 2 31.004818843451584 31.0 31.0 33.0 28.0 34.0 3 31.138461998251 31.0 31.0 34.0 28.0 34.0 4 34.97596230685969 35.0 35.0 37.0 32.0 37.0 5 34.79140196703929 35.0 35.0 37.0 32.0 37.0 6 34.83350496307741 35.0 35.0 37.0 32.0 37.0 7 35.490507846457106 35.0 35.0 37.0 35.0 37.0 8 34.46771758211915 37.0 35.0 37.0 33.0 37.0 9 36.58423717779629 39.0 37.0 39.0 32.0 39.0 10 35.9867113098912 38.0 35.0 39.0 30.0 39.0 11 35.74454867116347 37.0 35.0 39.0 30.0 39.0 12 35.55000987547802 37.0 35.0 39.0 30.0 39.0 13 35.45775731792412 37.0 35.0 39.0 30.0 39.0 14 36.41062529967528 38.0 35.0 40.0 30.0 41.0 15 36.54896645326105 38.0 35.0 40.0 30.0 41.0 16 36.592072589961056 38.0 35.0 40.0 31.0 41.0 17 36.49734401617499 38.0 35.0 40.0 30.0 41.0 18 36.38035241163072 38.0 35.0 40.0 30.0 41.0 19 36.32250290092167 38.0 35.0 40.0 30.0 41.0 20 36.16565464673726 38.0 34.0 40.0 30.0 41.0 21 36.014603363120024 38.0 34.0 40.0 30.0 41.0 22 35.98144222260627 38.0 34.0 40.0 30.0 41.0 23 35.85498445261915 38.0 34.0 40.0 29.0 41.0 24 35.75829800034564 38.0 34.0 40.0 29.0 41.0 25 35.577667710955154 37.0 34.0 40.0 29.0 41.0 26 35.413791624815 37.0 34.0 40.0 27.0 41.0 27 35.235164693087036 37.0 34.0 40.0 27.0 41.0 28 35.23511271688694 37.0 34.0 40.0 27.0 41.0 29 35.08983663880309 37.0 33.0 40.0 27.0 41.0 30 35.079965708701984 37.0 33.0 40.0 27.0 41.0 31 35.00428576254933 37.0 33.0 40.0 26.0 41.0 32 34.70281957891481 37.0 33.0 40.0 25.0 41.0 33 34.46030415172892 37.0 33.0 40.0 24.0 41.0 34 34.27835561596345 37.0 33.0 40.0 23.0 41.0 35 34.05180727744766 37.0 33.0 40.0 23.0 41.0 36 33.98868867945368 37.0 33.0 40.0 22.0 41.0 37 33.994367729016886 37.0 33.0 40.0 22.0 41.0 38 33.994060419733806 37.0 33.0 40.0 22.0 41.0 39 33.90050748262371 37.0 33.0 40.0 21.0 41.0 40 33.84236690519411 37.0 33.0 40.0 21.0 41.0 41 33.85645960214818 37.0 33.0 40.0 21.0 41.0 42 33.705811783784206 37.0 32.0 40.0 21.0 41.0 43 33.75555138302171 37.0 32.0 40.0 21.0 41.0 44 33.39255317490121 36.0 32.0 40.0 19.0 41.0 45 33.3556490982779 36.0 32.0 40.0 19.0 41.0 46 33.32098974379632 36.0 32.0 40.0 20.0 41.0 47 33.28044018643863 36.0 31.0 40.0 20.0 41.0 48 33.2856504756472 36.0 32.0 40.0 20.0 41.0 49 33.282629034165254 36.0 32.0 40.0 20.0 41.0 50 32.74121082456343 35.0 31.0 39.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 2.0 12 6.0 13 16.0 14 27.0 15 115.0 16 403.0 17 1098.0 18 2305.0 19 4607.0 20 7795.0 21 12008.0 22 17858.0 23 25361.0 24 35962.0 25 49871.0 26 65925.0 27 77829.0 28 84986.0 29 93909.0 30 109906.0 31 131139.0 32 159125.0 33 193588.0 34 255656.0 35 292569.0 36 287334.0 37 338589.0 38 410505.0 39 419837.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.823695429862664 23.695949624666866 27.319437929372143 17.160917016098328 2 33.1160186750487 25.261245375742448 28.466162844033715 13.15657310517514 3 27.560250161451073 25.531359190626613 33.528157456700576 13.380233191221741 4 24.181992065833054 28.129487007899083 33.16114051375875 14.52738041250911 5 21.24874769842889 32.62861185862994 32.573971878276936 13.54866856466424 6 19.89518999250243 41.03410548309929 29.31516158750908 9.7555429368892 7 87.18205183846317 2.841961165982097 8.777058484919756 1.1989285106349803 8 85.34115228636807 5.093375243476013 8.347150339859379 1.2183221302965372 9 82.05148112679204 5.2604787267910025 10.205786770237909 2.4822533761790475 10 35.34202938474473 35.85851038809329 16.99517790803591 11.804282319126072 11 27.444538145982953 25.716426948100462 30.814674960335665 16.02435994558092 12 26.541646580031003 23.173653783932338 32.46209310756605 17.822606528470615 13 22.073220172483023 27.761755392205913 32.89492491388194 17.270099521429138 14 19.338654829953363 30.412314201327213 32.39387434493745 17.85515662378197 15 18.64301836189209 25.789518479488244 38.61792685129479 16.949536307324877 16 21.231595552396556 24.30062774255668 36.63711386556096 17.8306628394858 17 21.134302602838158 23.93975048825143 32.3170795092927 22.608867399617715 18 22.29665286265419 24.07073051249833 34.24360985104921 19.38900677379828 19 24.5836056669651 25.67750976827711 30.611577958452823 19.127306606304973 20 26.075972312278207 25.4194154496656 30.29968827273991 18.20492396531628 21 23.616913315392882 26.30362806870734 32.15842215849363 17.921036457406153 22 23.526214846221915 24.053253515215385 31.05961280329737 21.360918835265334 23 20.56519569689039 27.85229143575157 31.557090008485115 20.025422858872922 24 20.321589744056194 25.61796453403986 35.35700502739795 18.703440694505986 25 20.39247228693981 26.95056933430182 33.035390594646714 19.621567784111654 26 20.123820302683402 29.056092715145738 30.845016067142854 19.97507091502801 27 19.97562316215405 27.996655331523694 32.14796194822391 19.879759558098346 28 19.0647727405621 27.155128166812414 34.50985793605108 19.270241156574404 29 19.690046427740736 25.988100048987565 34.381736602809575 19.94011692046212 30 20.423073274747495 27.12475457488016 32.98750752030645 19.464664630065894 31 22.970329386174072 26.681397588044437 30.55037598283746 19.797897042944037 32 23.536480145741265 26.34192803115453 31.108762797515016 19.012829025589184 33 23.022240616021925 27.75922155245113 29.56035931147128 19.658178520055667 34 20.235731558519355 27.711208537610627 31.209174319079292 20.843885584790726 35 20.67619736922463 27.73752148891023 31.126662101423758 20.459619040441382 36 23.290795144903147 28.423574845078438 28.6761791775546 19.609450832463814 37 20.85905613819432 29.700077834359647 29.742243526689126 19.698622500756905 38 21.29354468588833 30.02359719484448 28.61341791593629 20.069440203330895 39 21.020539694873715 29.453548220269937 28.83022364059497 20.69568844426137 40 22.518331356072053 27.368328042589297 29.245643419878036 20.86769718146061 41 20.100073676263637 26.94481946716599 29.9026550742415 23.052451782328873 42 21.183127745805198 27.561094774702667 28.739200320173392 22.51657715931875 43 20.85960838532036 27.92229688025853 29.353169183830722 21.86492555059038 44 20.735807573712 28.945058557686437 29.544539055566453 20.77459481303511 45 20.250642230922463 30.118713641023774 28.648534336127483 20.982109791926277 46 21.058807172195852 29.756764377591498 28.76064050271381 20.423787947498838 47 21.069689689091366 28.557413560330723 29.17014798923573 21.202748761342182 48 21.75584050063476 27.238452512594485 30.13222745304925 20.873479533721508 49 21.084080599493493 27.147364221922782 30.297771650361298 21.470783528222427 50 20.13723665933369 29.79990462367282 29.242167511496486 20.820691205497003 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1570.0 1 2381.5 2 3193.0 3 24059.5 4 44926.0 5 33405.5 6 21885.0 7 21971.0 8 22057.0 9 22527.5 10 22998.0 11 22755.0 12 22512.0 13 22382.0 14 22252.0 15 21506.5 16 20761.0 17 19864.5 18 18968.0 19 18742.5 20 18517.0 21 19119.5 22 19722.0 23 21391.0 24 23060.0 25 27442.5 26 31825.0 27 37484.0 28 43143.0 29 50790.5 30 58438.0 31 67026.0 32 75614.0 33 88896.0 34 102178.0 35 111779.5 36 121381.0 37 131161.5 38 140942.0 39 155990.5 40 171039.0 41 190897.5 42 210756.0 43 226664.5 44 242573.0 45 247502.0 46 252431.0 47 244172.5 48 235914.0 49 223842.5 50 211771.0 51 201976.0 52 192181.0 53 176272.0 54 160363.0 55 145665.0 56 130967.0 57 122606.0 58 114245.0 59 104505.0 60 94765.0 61 84517.0 62 74269.0 63 63565.5 64 52862.0 65 43656.0 66 34450.0 67 28737.5 68 23025.0 69 19444.5 70 15864.0 71 12720.0 72 9576.0 73 7992.0 74 6408.0 75 5341.5 76 4275.0 77 3384.0 78 2493.0 79 1809.5 80 1126.0 81 880.5 82 635.0 83 405.5 84 176.0 85 151.5 86 127.0 87 85.0 88 43.0 89 42.5 90 42.0 91 24.5 92 7.0 93 6.5 94 6.0 95 3.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 3078332.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.590666313933756 #Duplication Level Percentage of deduplicated Percentage of total 1 80.10421304551954 18.897117602971107 2 5.823996348809119 2.7478390895664893 3 2.1147553620134194 1.4966546424258227 4 1.25434897386176 1.1836371233439196 5 0.8578573493585 1.0118713236836032 6 0.6474131302723266 0.9163744274108269 7 0.5564202833835176 0.9188427664923514 8 0.4731405650605631 0.8929360951943848 9 0.40053896132113487 0.850408288403086 >10 5.725467443150275 32.909313047621666 >50 1.774432303767039 28.842589233979915 >100 0.2658612798029534 8.234378934059698 >500 0.0011308754035420383 0.15623364823423058 >1k 2.8271885088550946E-4 0.13219000674503517 >5k 0.0 0.0 >10k+ 1.4135942544275473E-4 0.8096137698678013 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 24278 0.7886738662366503 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.01588522615494365 0.0 2 0.0 0.0 0.0 0.06298865749373361 0.0 3 0.0 0.0 0.0 0.11022202933276852 0.0 4 0.0 0.0 0.0 0.16765573044103105 0.0 5 0.0 9.745537518370338E-5 0.0 0.2739795447664514 0.0 6 0.0 9.745537518370338E-5 0.0 0.4974447200626833 0.0 7 0.0 9.745537518370338E-5 0.0 0.6206932845450068 0.0 8 0.0 9.745537518370338E-5 0.0 0.9239744121166917 0.0 9 0.0 9.745537518370338E-5 0.0 1.0899734011795998 0.0 10 0.0 9.745537518370338E-5 0.0 1.3140882789770565 0.0 11 0.0 9.745537518370338E-5 0.0 1.4615057765049384 0.0 12 0.0 9.745537518370338E-5 0.0 1.6017115762692262 0.0 13 0.0 9.745537518370338E-5 0.0 1.6799357574166789 0.0 14 0.0 9.745537518370338E-5 0.0 1.7197950058668137 0.0 15 0.0 9.745537518370338E-5 0.0 1.758354849314499 0.0 16 0.0 9.745537518370338E-5 0.0 1.8307317079509293 0.0 17 0.0 9.745537518370338E-5 0.0 1.9128865892307911 0.0 18 0.0 9.745537518370338E-5 0.0 2.043964068852872 0.0 19 0.0 9.745537518370338E-5 0.0 2.1054908957188503 0.0 20 0.0 9.745537518370338E-5 0.0 2.1749765782248307 0.0 21 0.0 9.745537518370338E-5 0.0 2.2535256106228956 0.0 22 0.0 9.745537518370338E-5 0.0 2.3406832011621876 0.0 23 0.0 9.745537518370338E-5 0.0 2.444862997233567 0.0 24 0.0 9.745537518370338E-5 0.0 2.5236719106321215 0.0 25 0.0 9.745537518370338E-5 0.0 2.5973481742710014 0.0 26 0.0 9.745537518370338E-5 0.0 2.6684581130300433 0.0 27 0.0 9.745537518370338E-5 0.0 2.743206385795944 0.0 28 0.0 9.745537518370338E-5 0.0 2.824809019949765 0.0 29 0.0 9.745537518370338E-5 0.0 2.911999095614118 0.0 30 0.0 9.745537518370338E-5 0.0 3.0288156053343176 0.0 31 0.0 9.745537518370338E-5 0.0 3.127537900395409 0.0 32 0.0 9.745537518370338E-5 0.0 3.2283717285854805 0.0 33 3.248512506123446E-5 9.745537518370338E-5 0.0 3.3249500053925307 0.0 34 3.248512506123446E-5 9.745537518370338E-5 0.0 3.4293896824643997 0.0 35 3.248512506123446E-5 9.745537518370338E-5 0.0 3.5464335880600273 0.0 36 3.248512506123446E-5 9.745537518370338E-5 0.0 3.6559084595163873 0.0 37 3.248512506123446E-5 9.745537518370338E-5 0.0 3.7726924841115252 0.0 38 3.248512506123446E-5 9.745537518370338E-5 0.0 3.8911982203349087 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 20670 0.0 42.60571 1 ACGGGTA 250 0.0 39.6 5 TAGTACG 135 0.0 39.11111 1 TAACGCG 40 4.1275416E-7 38.5 1 AGGGCGA 3280 0.0 38.5 6 TCGATAG 115 0.0 38.26087 1 ACGGGAT 1375 0.0 38.08 5 TACGGGA 1110 0.0 37.855858 4 AACGGGA 1200 0.0 37.583332 4 AAGGGCG 1605 0.0 37.14642 5 GGGCGAT 6665 0.0 37.03526 7 CGTTAGG 510 0.0 36.666668 2 TGGGCGA 1985 0.0 36.463478 6 GTTTTTT 24165 0.0 36.352573 2 AGGGATT 6415 0.0 36.318005 6 AGTACGG 335 0.0 36.119404 2 GGCGATT 1915 0.0 35.958225 8 TAGGGAC 3355 0.0 35.86885 5 AAGGGAT 5970 0.0 35.413734 5 CGGGATC 790 0.0 35.36709 6 >>END_MODULE