##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547201_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1719324 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.560759926575795 31.0 30.0 31.0 27.0 33.0 2 30.894221217176053 31.0 31.0 33.0 28.0 34.0 3 31.0482608280929 31.0 31.0 34.0 28.0 34.0 4 34.89322431374191 35.0 35.0 37.0 32.0 37.0 5 34.696111378658124 35.0 35.0 37.0 32.0 37.0 6 34.718156670877626 35.0 35.0 37.0 31.0 37.0 7 35.344945455306856 35.0 35.0 37.0 33.0 37.0 8 34.312521665491786 35.0 35.0 37.0 32.0 37.0 9 36.39999150829047 39.0 37.0 39.0 32.0 39.0 10 35.8299296700331 37.0 35.0 39.0 30.0 39.0 11 35.61991049970803 37.0 35.0 39.0 30.0 39.0 12 35.30072167898546 37.0 34.0 39.0 30.0 39.0 13 35.215613229385504 37.0 34.0 39.0 30.0 39.0 14 36.11145077949241 38.0 34.0 40.0 29.0 41.0 15 36.250726448301776 38.0 34.0 40.0 30.0 41.0 16 36.29727730200939 38.0 34.0 40.0 30.0 41.0 17 36.197257759444994 38.0 34.0 40.0 30.0 41.0 18 36.10208488917738 38.0 34.0 40.0 30.0 41.0 19 36.0513730977989 38.0 34.0 40.0 30.0 41.0 20 35.89375649964754 38.0 34.0 40.0 29.0 41.0 21 35.717871675146746 38.0 34.0 40.0 29.0 41.0 22 35.675553298854666 37.0 34.0 40.0 29.0 41.0 23 35.533639965474805 37.0 34.0 40.0 28.0 41.0 24 35.41537313502283 37.0 34.0 40.0 27.0 41.0 25 35.179698532679126 37.0 33.0 40.0 27.0 41.0 26 34.98333414760685 37.0 33.0 40.0 27.0 41.0 27 34.76826531822972 37.0 33.0 40.0 26.0 41.0 28 34.74687260807154 37.0 33.0 40.0 25.0 41.0 29 34.54009075659969 36.0 33.0 40.0 25.0 41.0 30 34.53901998692509 36.0 33.0 40.0 25.0 41.0 31 34.47572301672052 37.0 33.0 40.0 25.0 41.0 32 34.219154155935705 36.0 33.0 40.0 24.0 41.0 33 34.01690780795243 36.0 32.0 40.0 23.0 41.0 34 33.83768969664822 36.0 32.0 40.0 23.0 41.0 35 33.60872761620265 36.0 32.0 40.0 22.0 41.0 36 33.54196649380803 36.0 32.0 40.0 21.0 41.0 37 33.54662471994807 36.0 32.0 40.0 21.0 41.0 38 33.52853098078082 36.0 32.0 40.0 21.0 41.0 39 33.404595643404036 36.0 31.0 40.0 21.0 41.0 40 33.30481689315103 36.0 31.0 40.0 20.0 41.0 41 33.28729954330888 36.0 31.0 40.0 20.0 41.0 42 33.10901377518141 35.0 31.0 40.0 20.0 41.0 43 33.14121131328359 35.0 31.0 39.0 20.0 41.0 44 32.82411808361891 35.0 31.0 39.0 18.0 41.0 45 32.739021266497765 35.0 31.0 39.0 19.0 41.0 46 32.669367728246684 35.0 31.0 39.0 19.0 41.0 47 32.5823794700708 35.0 31.0 39.0 19.0 41.0 48 32.556926443183485 35.0 31.0 39.0 19.0 40.0 49 32.5386774104241 35.0 31.0 39.0 19.0 40.0 50 31.98582582456826 35.0 30.0 38.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 5.0 11 1.0 12 2.0 13 10.0 14 35.0 15 98.0 16 269.0 17 752.0 18 1607.0 19 3098.0 20 5183.0 21 8206.0 22 11610.0 23 16397.0 24 22586.0 25 30334.0 26 39747.0 27 47312.0 28 53306.0 29 59951.0 30 68611.0 31 80793.0 32 95438.0 33 114962.0 34 149258.0 35 164981.0 36 163750.0 37 186782.0 38 209740.0 39 184500.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.21090149384293 23.303926426898013 26.77220814692286 16.712963932336198 2 33.40842098406117 25.444418852991056 27.869209061235694 13.277951101712068 3 28.998955403402732 25.62792120624152 31.86502369535934 13.508099694996407 4 25.556672273521453 28.364229197056517 30.82188115794347 15.257217371478557 5 22.784478085573166 32.15164797327322 30.294522731026845 14.769351210126771 6 20.995519169161835 41.06741952069534 27.66866512652647 10.268396183616352 7 86.70884603483695 3.5155095839992927 8.296051238742669 1.479593142421091 8 84.65385232800799 5.706894104892387 7.926254737326996 1.7129988297726315 9 81.60812040080869 5.236011362605303 10.020391735356455 3.135476501229553 10 38.72894230523159 30.974266630373332 16.459724868611154 13.837066195783922 11 32.89153178807484 25.424759963799726 24.761650509153597 16.92205773897183 12 28.95888151389732 22.251477906432992 29.69614802096638 19.093492558703304 13 24.66672948205225 25.28540286763868 30.782505217166744 19.26536243314233 14 21.301976823449216 27.951450686432576 30.967112655904298 19.77945983421391 15 20.911997971295694 23.400301513850792 35.73346268649772 19.954237828355794 16 23.75648801505708 21.745639565317532 33.69161368072568 20.806258738899707 17 23.031842747498434 22.12049619501618 30.185002943017142 24.662658114468243 18 24.98982158103999 22.54042868010916 31.28752928476541 21.182220454085442 19 27.10640926317553 24.500036060684316 27.41891580644486 20.9746388696953 20 29.283602159918665 23.592062927057377 26.475521774837084 20.64881313818687 21 27.14561071677008 24.588268412469088 28.2740193238738 19.99210154688703 22 26.084728649166767 22.816932701457084 27.959360772024354 23.138977877351795 23 24.19258964569796 25.648452531343715 27.320854010064423 22.838103812893902 24 23.616432970167345 24.241969518252525 31.00235906670296 21.139238444877172 25 24.265350800663516 24.498814650409116 29.267142202400475 21.96869234652689 26 22.929011634805306 25.891455013714694 27.924812309954376 23.254721041525624 27 22.624822313886156 25.124583848070518 29.235269210457133 23.01532462758619 28 22.285677394138624 25.590697274044917 31.113623726534385 21.010001605282074 29 23.221103177760565 24.581405249970338 30.676242523224246 21.521249049044858 30 24.061317122310864 24.26221003138443 30.499545170078473 21.17692767622624 31 26.552121647810417 24.619676105259973 27.387449951259914 21.440752295669693 32 27.248848966221605 24.691041362768157 27.423975934727835 20.6361337362824 33 26.28503993429976 24.771247304173034 26.8844034050592 22.059309356468006 34 23.800284297782152 25.830558987136804 28.404884710502497 21.964272004578543 35 23.656972158825212 25.22712414879336 28.899439547170864 22.21646414521056 36 26.426665363829038 26.22088681365467 26.144635915045683 21.20781190747061 37 24.36760028941607 27.655694912651718 26.19843612954859 21.77826866838362 38 24.3645758449251 27.985708336532266 25.562430350533116 22.087285468009522 39 24.02275545505094 26.79279763441911 25.47041744313463 23.714029467395324 40 24.848137989116655 24.79334901391477 27.443634823919165 22.91487817304941 41 22.53606650055487 25.005699914617608 27.592530552705597 24.865703032121928 42 23.760792032217314 26.138296214093447 25.874529757044044 24.226381996645195 43 23.328412794796094 25.60709906916905 27.200167042395734 23.86432109363913 44 23.237563135278748 25.55527637606408 28.112676842759132 23.09448364589804 45 22.759061119370173 27.004101612028915 27.28851571896862 22.948321549632297 46 23.546230960540303 26.30952630219784 27.486616833127435 22.657625904134417 47 22.817456163003598 27.004683235969484 27.48155670484446 22.696303896182453 48 23.343302367674738 25.727088088109046 28.227314921445874 22.702294622770346 49 23.447878352189583 25.602097103280126 28.169501501753015 22.78052304277728 50 22.488140687851736 26.68316152162129 28.26506231518899 22.563635475337982 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1092.0 1 1701.0 2 2310.0 3 12878.0 4 23446.0 5 16857.5 6 10269.0 7 10448.5 8 10628.0 9 10728.0 10 10828.0 11 10930.5 12 11033.0 13 10724.0 14 10415.0 15 10040.5 16 9666.0 17 9230.5 18 8795.0 19 8503.0 20 8211.0 21 8702.5 22 9194.0 23 9468.5 24 9743.0 25 11220.0 26 12697.0 27 14341.5 28 15986.0 29 18311.5 30 20637.0 31 23852.5 32 27068.0 33 31095.5 34 35123.0 35 39626.0 36 44129.0 37 48320.0 38 52511.0 39 58415.0 40 64319.0 41 71985.0 42 79651.0 43 87353.0 44 95055.0 45 100404.5 46 105754.0 47 111080.0 48 116406.0 49 120779.0 50 125152.0 51 122450.5 52 119749.0 53 112100.0 54 104451.0 55 101190.5 56 97930.0 57 96193.0 58 94456.0 59 92296.5 60 90137.0 61 83868.0 62 77599.0 63 69806.5 64 62014.0 65 54684.5 66 47355.0 67 40768.5 68 34182.0 69 30005.5 70 25829.0 71 22172.5 72 18516.0 73 15221.5 74 11927.0 75 9714.5 76 7502.0 77 5572.5 78 3643.0 79 2850.5 80 2058.0 81 1579.5 82 1101.0 83 755.0 84 409.0 85 318.5 86 228.0 87 143.5 88 59.0 89 54.0 90 49.0 91 27.0 92 5.0 93 5.5 94 6.0 95 3.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1719324.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.22135129737496 #Duplication Level Percentage of deduplicated Percentage of total 1 77.63836213036453 21.134211297034653 2 5.363756278280003 2.9201738784912092 3 2.2445276219830523 1.832972246839869 4 1.4296626568715791 1.5566939767775876 5 1.123543310863631 1.529218358141733 6 0.9087866730105861 1.4843040768236277 7 0.7616289779769686 1.4512798977440202 8 0.6865133944468379 1.4950257824472575 9 0.5948050721740005 1.457225804079804 >10 8.7211159059494 54.175806240184464 >50 0.4940315521743933 8.233220152244465 >100 0.03043986931941507 1.398523009275269 >500 0.0023917017262944096 0.45017392189211514 >1k 2.1742742966312815E-4 0.07055052785897992 >5k 0.0 0.0 >10k+ 2.1742742966312815E-4 0.8106208301649237 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13696 0.7965921490074006 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.013551837815327419 0.0 2 0.0 0.0 0.0 0.0597327786967436 0.0 3 0.0 0.0 0.0 0.09672406131712231 0.0 4 0.0 0.0 0.0 0.13691427561064698 0.0 5 0.0 0.0 0.0 0.21543350758786592 0.0 6 0.0 0.0 0.0 0.42074675860977917 0.0 7 0.0 0.0 0.0 0.5245666320018798 0.0 8 0.0 0.0 0.0 0.7953125763381422 0.0 9 0.0 0.0 0.0 0.974220100458087 0.0 10 0.0 0.0 0.0 1.2166409588884934 0.0 11 0.0 0.0 0.0 1.3653622004927517 0.0 12 0.0 0.0 0.0 1.4942500657235054 0.0 13 0.0 0.0 0.0 1.5742815199462115 0.0 14 0.0 0.0 0.0 1.6202298112513989 0.0 15 0.0 0.0 0.0 1.6596639144221799 0.0 16 0.0 0.0 0.0 1.720443616211953 0.0 17 5.816239405719923E-5 0.0 0.0 1.7829681898234422 0.0 18 5.816239405719923E-5 0.0 0.0 1.8868462256096001 0.0 19 5.816239405719923E-5 0.0 0.0 1.9337251152197026 0.0 20 5.816239405719923E-5 0.0 0.0 1.9908987485779295 0.0 21 5.816239405719923E-5 0.0 0.0 2.053248835007247 0.0 22 5.816239405719923E-5 0.0 0.0 2.114842810313821 0.0 23 5.816239405719923E-5 0.0 0.0 2.182020375449886 0.0 24 5.816239405719923E-5 0.0 0.0 2.24175315414663 0.0 25 5.816239405719923E-5 0.0 0.0 2.2963094797722827 0.0 26 5.816239405719923E-5 0.0 0.0 2.3497607199108486 0.0 27 5.816239405719923E-5 0.0 0.0 2.412227131128281 0.0 28 5.816239405719923E-5 0.0 0.0 2.4759149526209137 0.0 29 5.816239405719923E-5 0.0 0.0 2.542161919452064 0.0 30 5.816239405719923E-5 0.0 0.0 2.630626920813064 0.0 31 5.816239405719923E-5 0.0 0.0 2.703678887748906 0.0 32 5.816239405719923E-5 0.0 0.0 2.790166367711961 0.0 33 5.816239405719923E-5 0.0 0.0 2.8722335057266695 0.0 34 5.816239405719923E-5 0.0 0.0 2.9547077804997777 0.0 35 5.816239405719923E-5 0.0 0.0 3.037996328789687 0.0 36 5.816239405719923E-5 0.0 0.0 3.1145380393689615 0.0 37 5.816239405719923E-5 0.0 0.0 3.1952092799262966 0.0 38 5.816239405719923E-5 0.0 0.0 3.293794537853249 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAATGCG 30 2.5284517E-6 44.000004 1 CGTTTTT 9095 0.0 41.968117 1 CGGTCTA 220 0.0 38.0 31 GTTGATC 1040 0.0 37.865383 16 GGCGATA 795 0.0 37.08176 8 TTATACG 30 1.3013635E-4 36.666668 1 CGAATAT 60 1.9826984E-10 36.666668 14 CGTAAGG 270 0.0 36.666668 2 CGGTAGT 385 0.0 36.57143 12 GGTACCT 1095 0.0 36.365295 8 CATATGC 1035 0.0 36.347824 33 GGGCGAT 3800 0.0 36.3 7 TAGGGAC 1540 0.0 36.285713 5 ACGGGTA 85 0.0 36.235294 5 TAACGCC 110 0.0 36.0 12 GCCCTAC 1015 0.0 35.980293 26 GGACTAA 1170 0.0 35.91453 8 ATTGGGA 1240 0.0 35.83871 4 GTAGCAT 1065 0.0 35.73709 29 GTTTTTT 10920 0.0 35.65934 2 >>END_MODULE