##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547196_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1286513 Sequences flagged as poor quality 0 Sequence length 50 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.718245365573452 31.0 30.0 31.0 28.0 33.0 2 31.042545236620228 31.0 31.0 33.0 28.0 34.0 3 31.208641498375844 31.0 31.0 34.0 28.0 34.0 4 35.05484670578533 35.0 35.0 37.0 32.0 37.0 5 34.87467985166104 35.0 35.0 37.0 32.0 37.0 6 34.911383717070876 35.0 35.0 37.0 32.0 37.0 7 35.45641746332917 35.0 35.0 37.0 35.0 37.0 8 34.40720536830953 36.0 35.0 37.0 33.0 37.0 9 36.538586862316976 39.0 37.0 39.0 32.0 39.0 10 36.02645678667841 38.0 35.0 39.0 31.0 39.0 11 35.852820764345175 37.0 35.0 39.0 30.0 39.0 12 35.47507565022662 37.0 35.0 39.0 30.0 39.0 13 35.306990290809345 37.0 35.0 39.0 30.0 39.0 14 36.22751033219252 38.0 35.0 40.0 30.0 41.0 15 36.39203568094531 38.0 35.0 40.0 30.0 41.0 16 36.45995104596689 38.0 35.0 40.0 31.0 41.0 17 36.374764965453124 38.0 34.0 40.0 30.0 41.0 18 36.306114279451506 38.0 35.0 40.0 30.0 41.0 19 36.28877827118731 38.0 35.0 40.0 30.0 41.0 20 36.14891260329278 38.0 34.0 40.0 30.0 41.0 21 35.98637946138127 38.0 34.0 40.0 30.0 41.0 22 35.930073773059426 38.0 34.0 40.0 30.0 41.0 23 35.813677747523734 38.0 34.0 40.0 29.0 41.0 24 35.74079313617507 38.0 34.0 40.0 29.0 41.0 25 35.52875408176987 37.0 34.0 40.0 29.0 41.0 26 35.36029328891352 37.0 34.0 40.0 27.0 41.0 27 35.16497928897726 37.0 33.0 40.0 27.0 41.0 28 35.16483238024023 37.0 33.0 40.0 27.0 41.0 29 35.02118594992822 37.0 33.0 40.0 27.0 41.0 30 35.010480267202894 37.0 33.0 40.0 27.0 41.0 31 34.97173367078296 37.0 33.0 40.0 26.0 41.0 32 34.75091817960642 37.0 33.0 40.0 25.0 41.0 33 34.60531452072385 37.0 33.0 40.0 25.0 41.0 34 34.46106957333505 37.0 33.0 40.0 24.0 41.0 35 34.24434420794815 37.0 33.0 40.0 24.0 41.0 36 34.1990722208015 37.0 33.0 40.0 23.0 41.0 37 34.19154567423726 37.0 33.0 40.0 23.0 41.0 38 34.198733320222956 37.0 33.0 40.0 23.0 41.0 39 34.095317342304355 37.0 33.0 40.0 23.0 41.0 40 34.004076134481345 36.0 33.0 40.0 23.0 41.0 41 34.0045277428211 36.0 33.0 40.0 23.0 41.0 42 33.84754060005612 36.0 32.0 40.0 23.0 41.0 43 33.86859674173522 36.0 33.0 40.0 23.0 41.0 44 33.566909934062075 36.0 32.0 40.0 23.0 41.0 45 33.48603239920622 35.0 32.0 39.0 23.0 41.0 46 33.422284112169876 35.0 32.0 39.0 23.0 41.0 47 33.332570288835015 35.0 32.0 39.0 22.0 41.0 48 33.33108721015645 35.0 32.0 39.0 22.0 41.0 49 33.332367414864834 35.0 32.0 39.0 22.0 41.0 50 32.75439268783137 35.0 31.0 39.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 3.0 13 4.0 14 19.0 15 61.0 16 136.0 17 363.0 18 888.0 19 1631.0 20 2933.0 21 4528.0 22 6836.0 23 9797.0 24 13538.0 25 18265.0 26 23908.0 27 29189.0 28 33224.0 29 39066.0 30 47062.0 31 56494.0 32 69218.0 33 86076.0 34 117618.0 35 132423.0 36 123933.0 37 144961.0 38 167817.0 39 156520.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.83611358765904 23.573411228646737 26.926117341993432 15.664357841700783 2 31.99252553219439 25.975407943798466 28.76760670121483 13.264459822792308 3 29.701992906406698 26.12970098242303 30.71791734712358 13.450388764046691 4 25.879101105080167 28.75050621330682 30.19402058121449 15.176372100398519 5 23.038165957125965 32.431386235506366 30.01811874423344 14.512329063134224 6 21.127108703915155 41.565145474627926 26.975708756926668 10.332037064530246 7 88.7076150804539 3.3882284905010676 6.454345972407586 1.4498104566374377 8 86.61428217204178 5.669433577429843 6.234371514318161 1.4819127362102054 9 83.412915376681 5.469901975339542 8.080058266026072 3.037124381953389 10 38.59634531481609 33.07724057199577 14.935488409367025 13.390925703821106 11 34.33933430909754 25.750536527808116 23.867384161683557 16.04274500141079 12 31.195798254662023 22.47812497813858 28.61549008832402 17.71058667887538 13 24.487898684272917 28.44479612720587 28.99006850299997 18.07723668552125 14 21.614161691331528 30.99230244855668 29.31715419898594 18.076381661125847 15 20.679853215630157 23.97154167894145 36.40064266742738 18.947962438001014 16 23.29754926689431 22.611197865859108 34.77151027622729 19.31974259101929 17 23.018655855012735 21.958192416244533 29.196440300253474 25.826711428489258 18 24.706940388476447 22.98655357543997 31.614138372484383 20.6923676635992 19 28.909152103398878 24.818948584273926 26.106459864766236 20.165439447560964 20 29.763399203894558 24.923961125927217 25.697447285802788 19.61519238437544 21 27.046287134292463 25.706774824661704 27.729140708255574 19.517797332790263 22 25.382254201861933 23.25005654820433 27.213172350376563 24.154516899557173 23 23.155615217257814 27.441930240891466 27.179826398955935 22.222628142894788 24 23.039798276426275 25.12893379235188 31.97876741237749 19.852500518844348 25 23.08021761148158 25.65337466469441 30.06973112591944 21.196676597904567 26 21.672847456652207 28.5906943808574 27.116865511658254 22.619592650832132 27 21.86771528931305 27.313443393109903 28.884434125422754 21.934407192154296 28 20.769397588675744 26.86517742144852 31.78382185022615 20.58160313964958 29 22.36432900405981 25.22632884393706 31.16338505712729 21.245957094875838 30 22.89615417799898 26.14415866765435 30.327637575368456 20.632049578978215 31 26.860513652019062 25.791966346239796 26.52347858125025 20.824041420490893 32 27.085074150047454 25.872416368897944 26.696271238611658 20.346238242442944 33 26.859891816095132 25.52496554640334 26.041944387658734 21.573198249842793 34 22.819046523431943 26.912514681157518 28.0367940316188 22.23164476379174 35 22.79378443902238 26.611235176014546 29.208332912298594 21.38664747266448 36 26.949125271178758 26.93567806932382 25.60409416772314 20.511102491774277 37 23.752111327285462 29.501062173487558 26.500937029007872 20.24588947021911 38 23.62696684759501 29.75686992669332 25.276930742246677 21.339232483464997 39 23.38250760000093 28.644405458786657 25.774710399350802 22.198376541861606 40 24.881443094628658 26.108791749480964 26.952934016212815 22.056831139677563 41 21.679454463343937 25.714625503201287 27.53124142546558 25.074678607989192 42 23.362297932473282 26.63743001431 25.255632861852156 24.744639191364566 43 22.98258937142493 25.850574382069986 26.835717944552446 24.331118301952642 44 22.03164678475849 27.108315267704253 28.66088411077074 22.199153836766516 45 22.068101915798753 29.326870385297312 26.070237922197443 22.534789776706493 46 23.210725426015905 28.61642284220991 26.70660926084696 21.466242470927227 47 22.21423335792176 27.41589086157699 27.78557231835201 22.584303462149236 48 22.926468679290455 26.225930091650838 29.161462029532544 21.68613919952616 49 22.68480769335405 25.912136138538827 29.515986235661824 21.8870699324453 50 22.06545911312206 28.315298796047923 27.766139945729268 21.85310214510075 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 776.0 1 1096.5 2 1417.0 3 6634.5 4 11852.0 5 8782.5 6 5713.0 7 5764.0 8 5815.0 9 6047.5 10 6280.0 11 6363.5 12 6447.0 13 6496.5 14 6546.0 15 6255.5 16 5965.0 17 5774.5 18 5584.0 19 5894.0 20 6204.0 21 6044.5 22 5885.0 23 6646.0 24 7407.0 25 8848.0 26 10289.0 27 12127.5 28 13966.0 29 15713.0 30 17460.0 31 21335.5 32 25211.0 33 28686.5 34 32162.0 35 35800.0 36 39438.0 37 42252.5 38 45067.0 39 51191.0 40 57315.0 41 66385.0 42 75455.0 43 81383.0 44 87311.0 45 87882.0 46 88453.0 47 89340.0 48 90227.0 49 90341.0 50 90455.0 51 89365.0 52 88275.0 53 83633.0 54 78991.0 55 74276.0 56 69561.0 57 66155.5 58 62750.0 59 59308.0 60 55866.0 61 52239.0 62 48612.0 63 44623.0 64 40634.0 65 34882.0 66 29130.0 67 24333.5 68 19537.0 69 17298.0 70 15059.0 71 13481.5 72 11904.0 73 9945.5 74 7987.0 75 6334.0 76 4681.0 77 3564.0 78 2447.0 79 1896.5 80 1346.0 81 1005.5 82 665.0 83 452.5 84 240.0 85 156.5 86 73.0 87 56.0 88 39.0 89 23.5 90 8.0 91 6.5 92 5.0 93 4.0 94 3.0 95 1.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1286513.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.62524359762427 #Duplication Level Percentage of deduplicated Percentage of total 1 76.42238764153846 20.347646872680322 2 6.557057278101464 3.4916649462605323 3 2.664812613369383 2.1285385491894466 4 1.5097784684468893 1.6079287800338606 5 1.0438350331782458 1.3896181017052502 6 0.8420909822521725 1.3452526520296075 7 0.720575660203036 1.3429851738397336 8 0.6216958859371879 1.3242243525374766 9 0.5753307175644522 1.3786488453914556 >10 8.366329451420851 53.021540605989784 >50 0.6403554564099223 10.450603551646134 >100 0.034597559592352875 1.4666537033683762 >500 5.766259928173865E-4 0.11798632581798113 >1k 2.883129964086932E-4 0.10977257379291673 >5k 2.883129964086932E-4 0.47693496571705707 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6213 0.48293332442035175 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 1430 0.11115317140207677 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.011659423573644417 0.0 2 0.0 0.0 0.0 0.04827001359488789 0.0 3 0.0 0.0 0.0 0.08006137520569166 0.0 4 0.0 0.0 0.0 0.11993660382755557 0.0 5 0.0 0.0 0.0 0.1810319833534523 0.0 6 0.0 0.0 0.0 0.33027260509610085 0.0 7 0.0 0.0 0.0 0.4007732529714041 0.0 8 0.0 0.0 0.0 0.6009266909856332 0.0 9 0.0 0.0 0.0 0.7117689444257462 0.0 10 0.0 0.0 0.0 0.8756227103806957 0.0 11 0.0 0.0 0.0 0.9893409549689742 0.0 12 0.0 0.0 0.0 1.0938093901888282 0.0 13 0.0 0.0 0.0 1.1522619670380323 0.0 14 0.0 0.0 0.0 1.1835092222153993 0.0 15 0.0 0.0 0.0 1.2137459940163837 0.0 16 0.0 0.0 0.0 1.2638815153830547 0.0 17 0.0 0.0 0.0 1.314017036749726 0.0 18 0.0 0.0 0.0 1.3943116004268903 0.0 19 0.0 0.0 0.0 1.4309221904481337 0.0 20 0.0 0.0 0.0 1.4731293037847266 0.0 21 0.0 0.0 0.0 1.52427530852778 0.0 22 0.0 0.0 0.0 1.5756545017423065 0.0 23 0.0 0.0 0.0 1.6390817659829322 0.0 24 0.0 0.0 0.0 1.6924041964597327 0.0 25 0.0 0.0 0.0 1.737875948396946 0.0 26 0.0 0.0 0.0 1.7824149464482675 0.0 27 0.0 0.0 0.0 1.833871869153285 0.0 28 0.0 0.0 0.0 1.8851733328773204 0.0 29 0.0 0.0 0.0 1.9327437810577894 0.0 30 0.0 0.0 0.0 2.0107064600202254 0.0 31 0.0 0.0 0.0 2.067293529097646 0.0 32 0.0 0.0 0.0 2.1319644651861274 0.0 33 0.0 0.0 0.0 2.1905725010163133 0.0 34 0.0 0.0 0.0 2.2501132907323904 0.0 35 0.0 0.0 0.0 2.320225291155239 0.0 36 0.0 0.0 0.0 2.384274391319792 0.0 37 0.0 0.0 0.0 2.4502667287466195 0.0 38 0.0 0.0 0.0 2.5255866050323625 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGTTAG 20 7.856832E-4 44.0 1 CACCGTT 20 7.856832E-4 44.0 24 TCGACTA 20 7.856832E-4 44.0 38 GCGTATT 20 7.856832E-4 44.0 43 GTACGAC 20 7.856832E-4 44.0 33 AGTACGG 100 0.0 41.8 2 CGTTTTT 5125 0.0 40.99512 1 CGGTCTA 170 0.0 40.11765 31 TCACGAC 175 0.0 38.97143 25 CGCATCG 75 0.0 38.13333 21 CGTTAGG 185 0.0 38.054054 2 ACTATCG 35 7.290886E-6 37.714287 13 ACGGGTA 160 0.0 37.125 5 AGGGCGA 1490 0.0 37.060402 6 GAGTACG 60 1.9826984E-10 36.666664 1 TCTAACG 30 1.3011818E-4 36.666664 1 TAACGGG 365 0.0 36.164383 3 TAGGGAC 1255 0.0 35.936256 5 ATAGGGA 1875 0.0 35.903996 4 GGCGATT 865 0.0 35.861275 8 >>END_MODULE