##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547192_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2107029 Sequences flagged as poor quality 0 Sequence length 50 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.595707985034853 31.0 30.0 31.0 28.0 33.0 2 30.929202208417635 31.0 31.0 33.0 28.0 34.0 3 31.048966103456575 31.0 31.0 34.0 28.0 34.0 4 34.887830684817345 35.0 35.0 37.0 32.0 37.0 5 34.70177866559976 35.0 35.0 37.0 32.0 37.0 6 34.743105102018056 35.0 35.0 37.0 32.0 37.0 7 35.42871597875492 35.0 35.0 37.0 35.0 37.0 8 34.40438646074639 36.0 35.0 37.0 33.0 37.0 9 36.50954732943875 39.0 37.0 39.0 32.0 39.0 10 35.90349919246484 38.0 35.0 39.0 30.0 39.0 11 35.65875837494406 37.0 35.0 39.0 30.0 39.0 12 35.477573872974695 37.0 35.0 39.0 30.0 39.0 13 35.41916746281138 37.0 35.0 39.0 30.0 39.0 14 36.34342147165511 38.0 35.0 40.0 30.0 41.0 15 36.46422094807428 38.0 35.0 40.0 30.0 41.0 16 36.49502166320445 38.0 35.0 40.0 30.0 41.0 17 36.40652786459038 38.0 34.0 40.0 30.0 41.0 18 36.27235125857309 38.0 35.0 40.0 30.0 41.0 19 36.22122666560356 38.0 34.0 40.0 30.0 41.0 20 36.044021700697996 38.0 34.0 40.0 30.0 41.0 21 35.88398071407655 38.0 34.0 40.0 29.0 41.0 22 35.837039262392686 38.0 34.0 40.0 29.0 41.0 23 35.70249199227918 37.0 34.0 40.0 29.0 41.0 24 35.6094016741108 37.0 34.0 40.0 29.0 41.0 25 35.4118918154425 37.0 34.0 40.0 27.0 41.0 26 35.24545889021935 37.0 34.0 40.0 27.0 41.0 27 35.060201354608786 37.0 33.0 40.0 27.0 41.0 28 35.04524427523304 37.0 33.0 40.0 27.0 41.0 29 34.886578210361606 37.0 33.0 40.0 26.0 41.0 30 34.86036025133019 37.0 33.0 40.0 26.0 41.0 31 34.77974769212953 37.0 33.0 40.0 25.0 41.0 32 34.45601223333898 37.0 33.0 40.0 24.0 41.0 33 34.18339804530455 37.0 33.0 40.0 23.0 41.0 34 33.98321807625808 37.0 33.0 40.0 23.0 41.0 35 33.720720502660384 37.0 32.0 40.0 21.0 41.0 36 33.646479948780964 37.0 32.0 40.0 20.0 41.0 37 33.63290111336863 37.0 32.0 40.0 20.0 41.0 38 33.635757267697784 37.0 32.0 40.0 20.0 41.0 39 33.51246518201695 37.0 32.0 40.0 19.0 41.0 40 33.45136018536052 37.0 32.0 40.0 18.0 41.0 41 33.466569752955465 37.0 32.0 40.0 18.0 41.0 42 33.31750251183064 37.0 32.0 40.0 18.0 41.0 43 33.365478121088984 37.0 32.0 40.0 18.0 41.0 44 33.080240945900606 36.0 31.0 40.0 18.0 41.0 45 33.01081190624334 36.0 31.0 40.0 18.0 41.0 46 32.9466144035037 36.0 31.0 40.0 18.0 41.0 47 32.8881121237534 36.0 31.0 40.0 18.0 41.0 48 32.88186114192069 36.0 31.0 40.0 18.0 41.0 49 32.87495710785186 36.0 31.0 39.0 18.0 41.0 50 32.32149960916532 35.0 30.0 39.0 17.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 3.0 11 0.0 12 1.0 13 13.0 14 38.0 15 101.0 16 311.0 17 911.0 18 1999.0 19 3778.0 20 6216.0 21 9721.0 22 14045.0 23 19495.0 24 27067.0 25 37371.0 26 49955.0 27 57830.0 28 62726.0 29 68113.0 30 78523.0 31 92221.0 32 110429.0 33 133200.0 34 172474.0 35 194720.0 36 195722.0 37 228111.0 38 274191.0 39 267743.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.84631061081741 23.32212798210181 26.85397305874765 17.977588348333125 2 34.305365517038446 24.640382263367044 28.00160795129066 13.052644268303853 3 27.59406728621201 25.067951129291526 34.37418279482627 12.963798789670195 4 23.8899891743303 28.17203749924657 33.89920119751555 14.038772128907576 5 21.427327293549354 31.906917275462277 32.73941649592862 13.926338935059746 6 19.952976442184706 40.7356044933411 29.613166216506748 9.698252847967446 7 86.07109821459505 2.909404664102867 9.810116519516344 1.2093806017857371 8 84.32290205782644 5.246439417777354 9.21506063751377 1.2155978868824302 9 80.97349395760571 5.329589673421676 11.095813109359197 2.6011032596134176 10 34.99662320736924 36.33917710672231 17.57284783455757 11.091351851350883 11 26.64837550883258 25.981844578313822 31.592303665492977 15.77747624736062 12 25.690913603941855 23.206894636950892 33.542964999532515 17.559226759574738 13 22.440460003160847 26.92492604515647 33.41529708418821 17.219316867494467 14 19.87053808941405 29.094236481794983 33.26033955868667 17.774885870104303 15 18.998741830321272 25.340515009522885 38.15780418779238 17.502938972363456 16 21.217648167158593 24.331985938494437 36.7562572703081 17.694108624038872 17 21.6299823115866 23.564080038765482 33.262522727499245 21.543414922148674 18 22.037000914557893 24.18248633502434 34.54147997013804 19.23903278027972 19 24.71128778958429 25.084657116726916 31.48884044785335 18.71521464583544 20 25.742075690462734 24.965342195100305 31.00811616736172 18.284465947075244 21 23.963410090701174 25.460351993256857 32.47439878615814 18.10183912988383 22 23.206562415609845 23.982346707140717 32.07554333613823 20.735547541111206 23 20.581206998100168 26.926539691670122 32.26543156264105 20.226821747588666 24 20.178602192945615 25.78958334223212 35.107395294511846 18.924419170310422 25 20.546893279589412 26.886768051127913 33.305284360110846 19.261054309171826 26 20.17974123754348 28.53297225619581 31.450255312100595 19.83703119416012 27 20.159760496889223 27.153067186071006 32.676294441130146 20.01087787590963 28 19.086258423590753 27.286904926320428 34.7443248289416 18.882511821147215 29 20.16559810045329 25.46903720831559 34.71281126173394 19.652553429497175 30 21.05001877050577 26.52668757762708 33.19536655641664 19.227927095450514 31 23.15625461253737 26.251893068391556 30.962032321339667 19.629819997731403 32 23.5013851256912 26.68278414772649 31.142950571634277 18.672880154948032 33 23.13456530498631 26.87077396656619 30.227538396481492 19.767122331966007 34 21.26558296065218 27.72885423029299 30.766733632996985 20.238829176057852 35 21.371988710169628 27.761649222673253 30.661182166927937 20.205179900229187 36 23.54319755447125 27.918979757753693 29.12418386268058 19.41363882509448 37 22.018254138884657 29.040416624545745 29.41017897712846 19.531150259441137 38 21.85874043499164 29.8395513303329 28.70586973411377 19.59583850056169 39 21.904776820822114 28.875397538429702 28.889255914370427 20.330569726377757 40 22.847573526515298 27.67413262940377 29.25536383220165 20.222930011879285 41 20.74840925302879 27.189943754926958 29.632340133904183 22.429306858140063 42 21.720014295009705 27.961978691323186 28.292206704321583 22.025800309345527 43 21.320684243074016 27.664877892046096 29.220860272924575 21.79357759195531 44 20.91769975638684 28.582568156394622 29.779371807412236 20.720360279806304 45 20.878972240059344 29.42531877824178 28.34450783544033 21.351201146258546 46 21.403217516227826 29.197082716944095 28.827747506085583 20.571952260742496 47 21.434588702860758 28.01774441642711 29.52209010886893 21.025576771843195 48 21.851953627596014 27.33730764977606 30.067122948948494 20.743615773679434 49 21.646118776723053 26.80504160123093 30.364271208417158 21.18456841362886 50 20.61177136147628 28.849958875743997 29.74894982461086 20.789319938168862 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1017.0 1 1590.5 2 2164.0 3 17968.0 4 33772.0 5 25370.5 6 16969.0 7 17126.0 8 17283.0 9 17656.0 10 18029.0 11 17784.5 12 17540.0 13 17002.0 14 16464.0 15 15905.5 16 15347.0 17 14597.0 18 13847.0 19 13319.0 20 12791.0 21 14030.5 22 15270.0 23 16234.0 24 17198.0 25 19979.5 26 22761.0 27 27114.0 28 31467.0 29 35915.0 30 40363.0 31 47108.5 32 53854.0 33 62352.5 34 70851.0 35 76022.5 36 81194.0 37 85773.0 38 90352.0 39 100664.0 40 110976.0 41 122419.0 42 133862.0 43 142820.5 44 151779.0 45 152873.5 46 153968.0 47 151481.5 48 148995.0 49 148904.0 50 148813.0 51 143957.5 52 139102.0 53 128111.5 54 117121.0 55 106694.5 56 96268.0 57 88776.5 58 81285.0 59 74016.5 60 66748.0 61 59756.5 62 52765.0 63 46282.5 64 39800.0 65 33549.0 66 27298.0 67 22188.5 68 17079.0 69 14670.5 70 12262.0 71 10254.5 72 8247.0 73 6847.5 74 5448.0 75 4414.5 76 3381.0 77 2521.5 78 1662.0 79 1313.5 80 965.0 81 688.0 82 411.0 83 265.5 84 120.0 85 107.0 86 94.0 87 61.5 88 29.0 89 18.5 90 8.0 91 7.5 92 7.0 93 5.0 94 3.0 95 1.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2107029.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.83531472221957 #Duplication Level Percentage of deduplicated Percentage of total 1 77.67117340602738 20.843303831948358 2 5.706011835303119 3.0624524681813785 3 2.368250454174948 1.9065823883647255 4 1.4713537851855152 1.579369675727294 5 1.1336923105740222 1.5211494976207092 6 0.8650321760587696 1.3928046413630122 7 0.7641194442939618 1.4353770041097196 8 0.6413513702494653 1.3768692694536941 9 0.5671297394060401 1.3697194540762312 >10 8.01475187672959 50.2108228658477 >50 0.7582918310951788 12.7129620344211 >100 0.03811914839274726 1.5519011091097217 >500 3.613112546970641E-4 0.07010136591079968 >1k 1.8065562734853206E-4 0.05924195653042684 >5k 0.0 0.0 >10k+ 1.8065562734853206E-4 0.9073424373350809 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 18716 0.8882649455702792 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.012624410959697279 0.0 2 0.0 0.0 0.0 0.05054510403036693 0.0 3 0.0 0.0 0.0 0.09007944361468209 0.0 4 0.0 0.0 0.0 0.13151219086210963 0.0 5 0.0 2.8476114946685596E-4 0.0 0.21613371244534366 0.0 6 0.0 2.8476114946685596E-4 0.0 0.41470715400689784 0.0 7 0.0 2.8476114946685596E-4 0.0 0.5192619560528118 0.0 8 0.0 2.8476114946685596E-4 0.0 0.7849915686969662 0.0 9 0.0 2.8476114946685596E-4 0.0 0.9440781308657831 0.0 10 0.0 2.8476114946685596E-4 0.0 1.1520012301681657 0.0 11 0.0 2.8476114946685596E-4 0.0 1.2746858253968028 0.0 12 0.0 2.8476114946685596E-4 0.0 1.3921023393603031 0.0 13 4.7460191577809324E-5 2.8476114946685596E-4 0.0 1.4656181761143297 0.0 14 4.7460191577809324E-5 2.8476114946685596E-4 0.0 1.5079052068101577 0.0 15 4.7460191577809324E-5 2.8476114946685596E-4 0.0 1.5427409874282698 0.0 16 4.7460191577809324E-5 2.8476114946685596E-4 0.0 1.6017814657510647 0.0 17 4.7460191577809324E-5 2.8476114946685596E-4 0.0 1.6658052641895293 0.0 18 4.7460191577809324E-5 2.8476114946685596E-4 0.0 1.7631461171156164 0.0 19 4.7460191577809324E-5 2.8476114946685596E-4 0.0 1.8147353453606951 0.0 20 4.7460191577809324E-5 2.8476114946685596E-4 0.0 1.8729215402350894 0.0 21 4.7460191577809324E-5 2.8476114946685596E-4 0.0 1.9378945425051102 0.0 22 4.7460191577809324E-5 2.8476114946685596E-4 0.0 2.0124070432822707 0.0 23 4.7460191577809324E-5 2.8476114946685596E-4 0.0 2.0883908099983435 0.0 24 4.7460191577809324E-5 2.8476114946685596E-4 0.0 2.151750165754719 0.0 25 4.7460191577809324E-5 2.8476114946685596E-4 0.0 2.210695723694358 0.0 26 4.7460191577809324E-5 2.8476114946685596E-4 0.0 2.2674106526298403 0.0 27 4.7460191577809324E-5 2.8476114946685596E-4 0.0 2.331719212217772 0.0 28 4.7460191577809324E-5 2.8476114946685596E-4 0.0 2.398448241576172 0.0 29 4.7460191577809324E-5 2.8476114946685596E-4 0.0 2.471774237563887 0.0 30 4.7460191577809324E-5 2.8476114946685596E-4 0.0 2.5727695252414655 0.0 31 4.7460191577809324E-5 2.8476114946685596E-4 0.0 2.6583877108478338 0.0 32 4.7460191577809324E-5 2.8476114946685596E-4 0.0 2.7468535079488703 0.0 33 4.7460191577809324E-5 2.8476114946685596E-4 0.0 2.8321394722141937 0.0 34 4.7460191577809324E-5 2.8476114946685596E-4 0.0 2.921459552763631 0.0 35 4.7460191577809324E-5 2.8476114946685596E-4 0.0 3.019702149329696 0.0 36 4.7460191577809324E-5 2.8476114946685596E-4 0.0 3.1131512665464025 0.0 37 4.7460191577809324E-5 2.8476114946685596E-4 0.0 3.2109192611966897 0.0 38 4.7460191577809324E-5 2.8476114946685596E-4 0.0 3.313907876920536 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 15750 0.0 42.68698 1 AACGGGA 935 0.0 36.47059 4 GTTTTTT 18395 0.0 36.44142 2 TAGGGAT 3695 0.0 36.43843 5 GGGCGAT 4130 0.0 36.3293 7 CGTTCGA 85 0.0 36.23529 14 AGGGCGA 2220 0.0 36.171173 6 CGTTAGG 295 0.0 35.79661 2 ACGGGAC 740 0.0 35.675674 5 AGGGATT 4400 0.0 35.6 6 TGGGCGA 1165 0.0 35.313305 6 TACGGGA 835 0.0 35.30539 4 ACGGGAT 1030 0.0 35.24272 5 TACGTCC 25 0.002353188 35.2 26 TAAGGGA 3320 0.0 35.18675 4 AGGGATC 2290 0.0 34.969433 6 GTAGGGA 3140 0.0 34.89172 4 AAGGGAT 3595 0.0 34.881783 5 TAGCACG 95 0.0 34.736843 1 TATGGGA 2460 0.0 34.69919 4 >>END_MODULE