##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547191_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1700458 Sequences flagged as poor quality 0 Sequence length 50 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.64351839327993 31.0 30.0 31.0 28.0 34.0 2 30.9819777965701 31.0 31.0 33.0 28.0 34.0 3 31.09604941727464 31.0 31.0 34.0 28.0 34.0 4 34.935977248482466 35.0 35.0 37.0 32.0 37.0 5 34.75783053741992 35.0 35.0 37.0 32.0 37.0 6 34.79618902672104 35.0 35.0 37.0 32.0 37.0 7 35.45689455429067 35.0 35.0 37.0 35.0 37.0 8 34.42938020227491 36.0 35.0 37.0 33.0 37.0 9 36.53198079576208 39.0 37.0 39.0 32.0 39.0 10 35.957951328406814 38.0 35.0 39.0 30.0 39.0 11 35.74706696666428 37.0 35.0 39.0 30.0 39.0 12 35.52045448931994 37.0 35.0 39.0 30.0 39.0 13 35.45268392397813 37.0 35.0 39.0 30.0 39.0 14 36.374317389785574 38.0 35.0 40.0 30.0 41.0 15 36.49781176600657 38.0 35.0 40.0 30.0 41.0 16 36.531038108556636 38.0 35.0 40.0 30.0 41.0 17 36.434775219382075 38.0 35.0 40.0 30.0 41.0 18 36.31002118252847 38.0 35.0 40.0 30.0 41.0 19 36.226293151609745 38.0 35.0 40.0 30.0 41.0 20 36.03440073203807 38.0 34.0 40.0 30.0 41.0 21 35.88199355702993 38.0 34.0 40.0 29.0 41.0 22 35.82925894082653 38.0 34.0 40.0 29.0 41.0 23 35.70068240438752 37.0 34.0 40.0 29.0 41.0 24 35.587035963252255 37.0 34.0 40.0 29.0 41.0 25 35.40778484384795 37.0 34.0 40.0 27.0 41.0 26 35.242005977213196 37.0 34.0 40.0 27.0 41.0 27 35.04705379374263 37.0 33.0 40.0 27.0 41.0 28 35.03551043307156 37.0 33.0 40.0 27.0 41.0 29 34.858552813418505 37.0 33.0 40.0 26.0 41.0 30 34.8167082044955 37.0 33.0 40.0 25.0 41.0 31 34.71013691605438 37.0 33.0 40.0 25.0 41.0 32 34.38110438481868 37.0 33.0 40.0 24.0 41.0 33 34.088382659260034 37.0 33.0 40.0 23.0 41.0 34 33.844946479125035 37.0 33.0 40.0 22.0 41.0 35 33.57488159072438 37.0 32.0 40.0 20.0 41.0 36 33.496577980755774 37.0 32.0 40.0 19.0 41.0 37 33.490901274833014 37.0 32.0 40.0 19.0 41.0 38 33.47979015065353 37.0 32.0 40.0 18.0 41.0 39 33.373951605979094 37.0 32.0 40.0 18.0 41.0 40 33.302878400995496 36.0 32.0 40.0 18.0 41.0 41 33.29461827342986 36.0 32.0 40.0 18.0 41.0 42 33.13759293084569 36.0 31.0 40.0 18.0 41.0 43 33.18201155218183 36.0 31.0 40.0 18.0 41.0 44 32.80518425036079 36.0 31.0 40.0 17.0 41.0 45 32.76067859364947 36.0 31.0 40.0 17.0 41.0 46 32.72733992841928 35.0 31.0 40.0 18.0 41.0 47 32.67244589398856 35.0 31.0 39.0 18.0 41.0 48 32.65490179704527 35.0 31.0 39.0 18.0 41.0 49 32.66798474293396 35.0 31.0 39.0 18.0 41.0 50 32.13174979917175 35.0 30.0 39.0 16.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 4.0 13 6.0 14 38.0 15 103.0 16 247.0 17 718.0 18 1610.0 19 3091.0 20 5134.0 21 7804.0 22 11315.0 23 16128.0 24 22399.0 25 31003.0 26 41320.0 27 48442.0 28 51994.0 29 55804.0 30 63614.0 31 74780.0 32 88811.0 33 107255.0 34 140234.0 35 159210.0 36 157647.0 37 183533.0 38 216445.0 39 211768.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.793586198541806 23.26426174595315 26.812541091870546 19.1296109636345 2 34.747050500512216 24.583200525975943 27.64766903975282 13.022079933759024 3 27.006018378578005 25.40944851328289 34.538577253892775 13.045955854246326 4 24.212947335364944 27.708123340888164 33.7391455713696 14.3397837523773 5 21.416877100169486 31.524683350015113 33.0347471093082 14.023692440507205 6 20.17556446557339 40.04638750266105 29.926525677199905 9.851522354565653 7 85.24579848487878 2.9617314864583544 10.562977738938569 1.2294922897242977 8 83.37295011108772 5.220887549119119 10.055879063170039 1.3502832766231214 9 79.75992350296214 5.640127542109243 12.065161268317123 2.534787686611489 10 33.60371147067437 36.56926545671813 18.691199665031423 11.135823407576076 11 28.09013806868502 24.584611910438248 31.597134419080035 15.728115601796691 12 26.14995489450489 22.80303306520949 33.59247920266187 17.454532837623745 13 22.601146279414134 26.17788854532132 34.27752993605252 16.94343523921202 14 19.832833271977314 28.301316468857213 34.121454337596106 17.744395921569364 15 18.73118889146336 24.508514764845707 38.928982662318035 17.8313136813729 16 21.923622929822436 23.077958996929063 37.02379006126585 17.974628011982656 17 21.411584408435843 22.890774132616038 33.50732567343621 22.190315785511903 18 22.496997867633308 23.32836212361611 35.03797212280456 19.13666788594602 19 24.8647129185196 25.011438094913252 31.603897302961908 18.51995168360524 20 25.912548266408226 24.863183918685436 31.011880328711438 18.212387486194896 21 24.505103919061806 25.10582443082981 32.44584694241199 17.943224707696398 22 23.647805473584175 23.18722367738574 32.22919942744837 20.935771421581713 23 21.029452065267122 26.51638558553049 32.22543573554889 20.228726613653496 24 20.678076141839433 24.91023006742889 35.517901647673746 18.89379214305793 25 21.036097333777136 25.857445464692454 33.441696295939096 19.664760905591315 26 20.18726719507333 27.584803623494373 31.719454405813025 20.508474775619273 27 20.07194532296593 26.581368078482388 33.04750837715486 20.299178221396826 28 19.747679742751657 26.257043690582183 35.00886231826955 18.986414248396606 29 20.486598316453566 24.750037930957426 34.61890855287223 20.14445519971678 30 21.11354705614605 25.806812047107307 33.68792407692516 19.391716819821482 31 23.777005959570893 25.567582380746835 31.27957291506171 19.375838744620566 32 24.2599934841084 25.750121437871442 30.890560072639257 19.099325005380905 33 23.950606248434244 26.41229598143559 29.906942717785444 19.73015505234472 34 21.533257510623606 27.226017931639596 30.961188103440367 20.279536454296434 35 21.76584190847407 27.329695881932984 30.62592548595731 20.278536723635632 36 24.055107506330646 27.962466582532468 28.513965061177636 19.468460849959246 37 22.341451538350256 29.51187268371227 28.634226778903095 19.51244899903438 38 21.885750780083953 29.37902612119794 28.34483415644491 20.390388942273198 39 21.987958538229112 28.719145077385033 28.273324010354855 21.019572374030997 40 23.138060451948828 26.9899638803193 28.978898626134843 20.893077041597028 41 20.865731467639893 26.582367809143182 29.584617791206842 22.967282932010082 42 21.642110537278782 27.466541367090514 28.401465957994848 22.48988213763586 43 21.24780500312269 27.157506977531938 29.44489072943878 22.1497972899066 44 21.527376742030675 27.538110320866494 29.80614634410259 21.12836659300024 45 20.880374581436296 28.69726861821933 28.810943875120703 21.611412925223675 46 22.025066188050513 28.416109071791247 29.054172464124374 20.50465227603387 47 21.28485384525816 27.847968018028084 29.620902133425233 21.246276003288525 48 21.453220250073805 26.954855691819496 30.723663859971843 20.868260198134855 49 21.708269183949266 26.382539292355357 30.684262710399196 21.22492881329618 50 20.850265046240484 28.08008195439111 30.083306967887474 20.986346031480927 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 897.0 1 1414.0 2 1931.0 3 17347.5 4 32764.0 5 24072.0 6 15380.0 7 15425.5 8 15471.0 9 15702.5 10 15934.0 11 15724.0 12 15514.0 13 15074.0 14 14634.0 15 13993.5 16 13353.0 17 12671.5 18 11990.0 19 11525.0 20 11060.0 21 11733.5 22 12407.0 23 13112.5 24 13818.0 25 16112.0 26 18406.0 27 20526.0 28 22646.0 29 26664.5 30 30683.0 31 35985.0 32 41287.0 33 47202.5 34 53118.0 35 57670.5 36 62223.0 37 67771.0 38 73319.0 39 77619.0 40 81919.0 41 90731.0 42 99543.0 43 107414.0 44 115285.0 45 117148.0 46 119011.0 47 119137.0 48 119263.0 49 117153.0 50 115043.0 51 108137.0 52 101231.0 53 94068.5 54 86906.0 55 83121.0 56 79336.0 57 74597.0 58 69858.0 59 64910.5 60 59963.0 61 55256.0 62 50549.0 63 45238.5 64 39928.0 65 33951.0 66 27974.0 67 23523.0 68 19072.0 69 16946.5 70 14821.0 71 12607.0 72 10393.0 73 8192.5 74 5992.0 75 4788.5 76 3585.0 77 2824.0 78 2063.0 79 1597.5 80 1132.0 81 773.5 82 415.0 83 314.0 84 213.0 85 152.0 86 91.0 87 58.0 88 25.0 89 15.5 90 6.0 91 4.5 92 3.0 93 2.5 94 2.0 95 1.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1700458.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.45492866697011 #Duplication Level Percentage of deduplicated Percentage of total 1 76.22674014576495 22.45253193509173 2 5.900153857834161 3.475772220133074 3 2.774820516557476 2.451964211365368 4 1.7543720936978928 2.0669961950077775 5 1.3162668144333671 1.9385272562917406 6 1.0648117470420546 1.8818372431725323 7 0.8980943474390021 1.851731345801741 8 0.7638462638480421 1.7999229771340566 9 0.6915375113317761 1.833226926013035 >10 8.276438485348658 52.145197284357835 >50 0.3050332481692561 5.536807510533212 >100 0.02707081085607395 1.2881992096615371 >500 4.070788386668421E-4 0.08207482296936551 >1k 2.0353941933342105E-4 0.08099567993543667 >5k 0.0 0.0 >10k+ 2.0353941933342105E-4 1.1142151825315254 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 18585 1.0929408429964163 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.009703268178337837 0.0 2 0.0 0.0 0.0 0.048751571635406464 0.0 3 0.0 0.0 0.0 0.09991425839391505 0.0 4 0.0 0.0 0.0 0.15254713730065664 0.0 5 0.0 0.0 0.0 0.24993266519961094 0.0 6 0.0 0.0 0.0 0.48675121643698344 0.0 7 0.0 0.0 0.0 0.6242435861397341 0.0 8 0.0 0.0 0.0 0.954978011806231 0.0 9 0.0 0.0 0.0 1.1595111434684067 0.0 10 0.0 0.0 0.0 1.4128546544519183 0.0 11 0.0 0.0 0.0 1.5565806388631769 0.0 12 0.0 0.0 0.0 1.6958960468297364 0.0 13 0.0 0.0 0.0 1.7868127292764655 0.0 14 0.0 0.0 0.0 1.8395632235550659 0.0 15 0.0 0.0 0.0 1.8837277956879852 0.0 16 0.0 0.0 0.0 1.9437116353358919 0.0 17 0.0 0.0 0.0 2.014104435393288 0.0 18 0.0 0.0 0.0 2.118899731719337 0.0 19 0.0 0.0 0.0 2.171650225997937 0.0 20 0.0 0.0 0.0 2.2310459887865504 0.0 21 0.0 0.0 0.0 2.294558289590216 0.0 22 0.0 0.0 0.0 2.362481166838581 0.0 23 0.0 0.0 0.0 2.4409306198682943 0.0 24 0.0 0.0 0.0 2.506030728192052 0.0 25 0.0 0.0 0.0 2.564603183377655 0.0 26 0.0 0.0 0.0 2.62729217657831 0.0 27 0.0 0.0 0.0 2.693156784819149 0.0 28 0.0 0.0 0.0 2.760256354464503 0.0 29 0.0 0.0 0.0 2.8342952310495173 0.0 30 0.0 0.0 0.0 2.9399138349785763 0.0 31 0.0 0.0 0.0 3.024890941146444 0.0 32 0.0 0.0 0.0 3.1109853933469687 0.0 33 0.0 0.0 0.0 3.1976091147208576 0.0 34 0.0 0.0 0.0 3.292642335182639 0.0 35 0.0 0.0 0.0 3.393438708865494 0.0 36 0.0 0.0 0.0 3.486237237261961 0.0 37 0.0 0.0 0.0 3.5893271106960594 0.0 38 0.0 0.0 0.0 3.6980037142934434 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTATCGT 20 7.857549E-4 44.0 44 CGTTTTT 13715 0.0 42.684654 1 GCCGATA 150 0.0 39.6 9 GCGATAA 230 0.0 39.217392 9 GTTAGCG 125 0.0 38.719997 1 GCGATAC 105 0.0 37.714283 9 GGGCGAT 3820 0.0 37.43455 7 CGGTCTA 190 0.0 37.05263 31 TGGGCGA 1070 0.0 37.009346 6 TCGATAG 125 0.0 36.959995 1 CGACGGT 185 0.0 36.864864 28 AGGGATC 2185 0.0 36.851257 6 GTTTTTT 15745 0.0 36.84598 2 TAGGGAT 3080 0.0 36.785713 5 ATAGGGA 2755 0.0 36.73321 4 AGGGCGA 1935 0.0 36.72351 6 TACGGGA 655 0.0 36.610687 4 TATAGCG 115 0.0 36.347828 1 CGGGATT 680 0.0 36.23529 6 GACCGAT 960 0.0 36.208332 9 >>END_MODULE