##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547186_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2823637 Sequences flagged as poor quality 0 Sequence length 50 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.533318907494127 31.0 30.0 31.0 27.0 33.0 2 30.873725624079867 31.0 31.0 33.0 28.0 34.0 3 31.00598164707432 31.0 31.0 34.0 28.0 34.0 4 34.84818515977798 35.0 35.0 37.0 32.0 37.0 5 34.65532502938586 35.0 35.0 37.0 31.0 37.0 6 34.69198909066569 35.0 35.0 37.0 31.0 37.0 7 35.334277033485535 35.0 35.0 37.0 33.0 37.0 8 34.295533030626814 35.0 35.0 37.0 32.0 37.0 9 36.38301984284807 39.0 37.0 39.0 32.0 39.0 10 35.80465229772807 37.0 35.0 39.0 30.0 39.0 11 35.59349555201324 37.0 35.0 39.0 30.0 39.0 12 35.2694220255649 37.0 34.0 39.0 30.0 39.0 13 35.17688463495839 37.0 34.0 39.0 29.0 39.0 14 36.05680616878161 38.0 34.0 40.0 29.0 41.0 15 36.18708495461704 38.0 34.0 40.0 30.0 41.0 16 36.22443890627584 38.0 34.0 40.0 30.0 41.0 17 36.118063688781525 38.0 34.0 40.0 30.0 41.0 18 35.992792274644366 38.0 34.0 40.0 29.0 41.0 19 35.909061965118035 37.0 34.0 40.0 29.0 41.0 20 35.719320153404986 37.0 34.0 40.0 29.0 41.0 21 35.54755126101549 37.0 34.0 40.0 29.0 41.0 22 35.51779956134588 37.0 34.0 40.0 28.0 41.0 23 35.37787116403419 37.0 33.0 40.0 28.0 41.0 24 35.243545115749654 37.0 33.0 40.0 27.0 41.0 25 35.01684246239867 37.0 33.0 40.0 27.0 41.0 26 34.82423696813719 36.0 33.0 40.0 26.0 41.0 27 34.60480614186597 36.0 33.0 40.0 25.0 41.0 28 34.5848659016722 36.0 33.0 40.0 25.0 41.0 29 34.34981550390507 36.0 33.0 40.0 25.0 41.0 30 34.31211979443533 36.0 33.0 40.0 24.0 41.0 31 34.215968979015365 36.0 33.0 40.0 24.0 41.0 32 33.90782809546695 36.0 32.0 40.0 23.0 41.0 33 33.63508198823008 36.0 32.0 40.0 22.0 41.0 34 33.384596886922786 36.0 31.0 40.0 21.0 41.0 35 33.1095084106066 36.0 31.0 40.0 19.0 41.0 36 33.02970034745967 36.0 31.0 40.0 18.0 41.0 37 33.03161206628189 36.0 31.0 40.0 18.0 41.0 38 33.00216989648457 36.0 31.0 40.0 18.0 41.0 39 32.860773180121946 35.0 31.0 40.0 18.0 41.0 40 32.7524561407858 35.0 31.0 39.0 18.0 41.0 41 32.73073521844345 35.0 31.0 39.0 18.0 41.0 42 32.5512234752555 35.0 31.0 39.0 17.0 41.0 43 32.557500131922055 35.0 31.0 39.0 18.0 41.0 44 32.2252842698973 35.0 30.0 39.0 16.0 41.0 45 32.14007041273365 35.0 30.0 39.0 17.0 41.0 46 32.076667078664855 35.0 30.0 39.0 17.0 40.0 47 31.986649842029976 35.0 30.0 39.0 17.0 40.0 48 31.963152841530267 35.0 30.0 39.0 17.0 40.0 49 31.958725572727655 35.0 30.0 39.0 17.0 40.0 50 31.425322730931775 35.0 29.0 38.0 15.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 3.0 10 2.0 11 3.0 12 10.0 13 26.0 14 57.0 15 231.0 16 623.0 17 1555.0 18 3436.0 19 6449.0 20 10466.0 21 16147.0 22 22654.0 23 31626.0 24 42664.0 25 57394.0 26 74807.0 27 88072.0 28 95006.0 29 102821.0 30 115005.0 31 133568.0 32 156533.0 33 187306.0 34 241109.0 35 263215.0 36 260640.0 37 295627.0 38 327276.0 39 289304.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.9904304271406 22.50306962261792 25.777924003687442 18.728575946554034 2 35.65043948637874 24.307975848170287 26.847926982115617 13.193657683335358 3 28.76219570716774 25.025136021379517 32.88893012805825 13.323738143394495 4 24.952074222005166 27.54061517114275 32.71450969087032 14.792800915981763 5 21.88631187365798 31.299632353592195 32.281203284983164 14.532852487766664 6 20.347551756829933 40.2318003341081 29.599272144400995 9.821375764660967 7 84.35457532253615 3.4301859622890616 10.663516592253183 1.5517221229216078 8 82.12787266918517 5.755484858712363 10.18640143899517 1.9302410331073008 9 79.07252242409346 4.98190808521067 12.558094400944597 3.3874750897512675 10 38.802048563607855 28.269816552198456 19.082339550020063 13.845795334173621 11 32.25439388986616 24.660287423631296 26.53060574004378 16.554712946458768 12 28.93516411635065 20.890787307291976 31.39681198397669 18.777236592380678 13 24.634788395250524 23.65633401177276 32.359081567496105 19.34979602548061 14 21.580288117771513 25.869968413078592 32.71950325059489 19.830240218555005 15 21.12725538020645 22.20972455028745 36.63059380508189 20.032426264424217 16 24.292818092410602 20.457835054576776 34.588511200271135 20.660835652741483 17 23.580757724877525 21.289882516768266 31.799271648586558 23.33008810976765 18 24.57111165493298 21.663549528498173 33.10050123298427 20.664837583584575 19 27.226233400398137 24.020793041031833 28.6661139516163 20.086859606953727 20 28.435985220479825 23.61468559875083 28.01500334497671 19.93432583579263 21 26.30469143165357 24.494366662570293 29.935930149661587 19.265011756114543 22 25.34638836366006 21.770999600869377 30.0101252391862 22.872486796284367 23 24.00028757237563 24.301990659564243 29.375624416311304 22.322097351748827 24 23.984669417492405 23.261028241236392 32.41765850213749 20.336643839133714 25 24.44074787233628 23.464135085352687 30.040263674119583 22.05485336819145 26 22.546170063644865 24.466494807937423 29.55911117470128 23.428223953716433 27 21.9477928643094 23.491475710227625 30.978521672580435 23.58220975288254 28 22.24931887491204 24.025255370998465 31.61713067225001 22.108295081839486 29 23.297328941361798 23.72323354595509 31.16834777274841 21.8110897399347 30 23.98778596540561 23.62906421753221 31.60431032742523 20.778839489636947 31 26.30518724609431 23.73052910129737 29.0240211471942 20.94026250541412 32 26.757547092632656 23.75627603689851 27.83633306972532 21.64984380074351 33 26.260209793256 24.269018999255216 27.773152143848517 21.697619063640264 34 23.238929083306388 25.523181627100083 28.97486468692683 22.263024602666704 35 23.4071164246679 25.789823550265133 29.08716665775381 21.71589336731315 36 25.36770838461176 27.12554765361128 26.171352762412447 21.335391199364505 37 23.913059646123067 28.15128148554506 26.33787558386577 21.5977832844661 38 24.411494820332784 28.143667192348026 26.057882086118013 21.386955901201183 39 23.86712597972048 26.96748909296769 25.535541572801318 23.629843354510513 40 24.688017616995385 25.07879022693073 27.543625473104367 22.689566682969517 41 22.498996861140437 24.727434865034 27.78756617794709 24.986002095878472 42 23.07672693055092 25.858245943086878 26.141108081527477 24.92391904483473 43 22.46492732599835 24.760866924466566 28.182482379994312 24.591723369540773 44 22.91544557604253 24.52301765418147 28.88207655587457 23.679460213901432 45 22.42487260225022 26.421597393715977 27.583821858121283 23.569708145912525 46 23.386221387522546 26.0081589807755 28.10687067778188 22.49874895392007 47 22.322593166189563 26.393335970593956 28.294819766138495 22.98925109707799 48 22.49233878150768 25.341182312032316 29.16380540416491 23.00267350229509 49 23.343510514984754 24.405970030850284 29.082952235007546 23.16756721915742 50 22.645474613061097 25.55654285589826 28.772997378912375 23.024985152128266 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1595.0 1 2885.0 2 4175.0 3 28919.5 4 53664.0 5 38435.0 6 23206.0 7 23070.5 8 22935.0 9 23306.0 10 23677.0 11 23621.0 12 23565.0 13 22907.0 14 22249.0 15 21204.0 16 20159.0 17 18987.5 18 17816.0 19 17242.5 20 16669.0 21 16382.0 22 16095.0 23 16164.0 24 16233.0 25 17798.0 26 19363.0 27 21619.0 28 23875.0 29 27106.5 30 30338.0 31 35666.0 32 40994.0 33 47002.5 34 53011.0 35 62052.0 36 71093.0 37 76234.5 38 81376.0 39 90881.5 40 100387.0 41 112783.0 42 125179.0 43 138878.5 44 152578.0 45 162839.5 46 173101.0 47 178629.0 48 184157.0 49 183292.5 50 182428.0 51 175670.0 52 168912.0 53 162737.0 54 156562.0 55 156539.5 56 156517.0 57 158227.5 58 159938.0 59 156765.5 60 153593.0 61 147175.5 62 140758.0 63 128835.5 64 116913.0 65 99517.0 66 82121.0 67 72250.0 68 62379.0 69 54372.5 70 46366.0 71 38925.5 72 31485.0 73 26472.5 74 21460.0 75 17009.0 76 12558.0 77 9914.5 78 7271.0 79 5471.5 80 3672.0 81 2733.5 82 1795.0 83 1318.5 84 842.0 85 587.0 86 332.0 87 243.0 88 154.0 89 101.0 90 48.0 91 35.5 92 23.0 93 19.5 94 16.0 95 9.5 96 3.0 97 2.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2823637.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.389300270848345 #Duplication Level Percentage of deduplicated Percentage of total 1 78.75929121554687 21.571618762218016 2 5.53785525829961 3.033559610521288 3 2.1681847345462355 1.781551882114694 4 1.3549912941199267 1.4844905367614423 5 0.9725438200155315 1.331864735648164 6 0.7814181150154463 1.2841497233543022 7 0.675383499551686 1.2948797027038246 8 0.5815192787245266 1.2741924910618567 9 0.5126023246919835 1.2635837091471271 >10 7.97381144722679 50.67298139212531 >50 0.6321506496721556 10.8890187566355 >100 0.04655823653587753 2.0812961169500035 >500 0.002635804323828769 0.5081653731709661 >1k 9.225315133400624E-4 0.4024028683129634 >5k 0.0 0.0 >10k+ 1.3179021619143748E-4 1.126244339274558 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 31201 1.1049933118173476 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCA 3602 0.12756597253825475 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.016397291861524693 0.0 2 0.0 0.0 0.0 0.05538955609378968 0.0 3 0.0 0.0 0.0 0.10621053626935757 0.0 4 0.0 0.0 0.0 0.1634771041745097 0.0 5 0.0 0.0 0.0 0.2714938216208387 0.0 6 0.0 0.0 0.0 0.5564808790931696 0.0 7 0.0 0.0 0.0 0.732388759603306 0.0 8 0.0 0.0 0.0 1.1754343777192324 0.0 9 0.0 0.0 0.0 1.4371535717941082 0.0 10 0.0 0.0 0.0 1.7677201424970703 0.0 11 0.0 0.0 0.0 1.9445134059370945 0.0 12 0.0 0.0 0.0 2.1027490431666678 0.0 13 0.0 0.0 0.0 2.2033639593191334 0.0 14 0.0 0.0 0.0 2.2642428895782283 0.0 15 0.0 0.0 0.0 2.3082641288522567 0.0 16 0.0 0.0 0.0 2.367513954520358 0.0 17 0.0 0.0 0.0 2.426940856774437 0.0 18 0.0 0.0 0.0 2.5322305947967108 0.0 19 0.0 0.0 0.0 2.5840786191709486 0.0 20 0.0 0.0 0.0 2.6414160177104917 0.0 21 0.0 0.0 0.0 2.7061198022267026 0.0 22 0.0 0.0 0.0 2.7748609329032026 0.0 23 0.0 0.0 0.0 2.8532704451740787 0.0 24 0.0 0.0 0.0 2.9207012091143443 0.0 25 0.0 0.0 0.0 2.9826780142065004 0.0 26 0.0 0.0 0.0 3.0407591344071494 0.0 27 0.0 0.0 0.0 3.106879531611181 0.0 28 0.0 0.0 0.0 3.1703437800255485 0.0 29 0.0 0.0 0.0 3.2413514910025616 0.0 30 0.0 0.0 0.0 3.3431351126224795 0.0 31 0.0 0.0 0.0 3.424873664709734 0.0 32 0.0 0.0 0.0 3.5192909003529844 0.0 33 0.0 0.0 0.0 3.607793778024583 0.0 34 0.0 0.0 0.0 3.6975716071152207 0.0 35 0.0 0.0 0.0 3.801586393718456 0.0 36 0.0 0.0 0.0 3.8930287427172825 0.0 37 0.0 0.0 0.0 3.992297876816319 0.0 38 0.0 0.0 0.0 4.11444530582366 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 21860 0.0 42.4602 1 CGGTCTA 340 0.0 40.11765 31 CACGACG 370 0.0 37.459457 26 TAGGGAC 2300 0.0 37.208694 5 CGAATAT 535 0.0 37.009346 14 GTTTTTT 25340 0.0 36.898186 2 TCACGAC 390 0.0 36.666668 25 CATATGC 1930 0.0 36.590675 33 GGGCGAT 5760 0.0 36.4375 7 GCTACGA 550 0.0 36.4 10 AGGGCGA 3075 0.0 36.201626 6 TAGGGAT 2620 0.0 36.190838 5 GTTGATC 1955 0.0 36.122765 16 TTGATCC 1960 0.0 36.030613 17 TATACTA 2050 0.0 35.951218 44 TAGCATA 1940 0.0 35.948456 30 TAGGGTA 1250 0.0 35.728 5 TACGGGA 795 0.0 35.698112 4 TACGAAT 555 0.0 35.675674 12 TATAGCG 105 0.0 35.61905 1 >>END_MODULE