##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547183_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2032945 Sequences flagged as poor quality 0 Sequence length 50 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.619836247414465 31.0 30.0 31.0 28.0 33.0 2 30.936198962588758 31.0 31.0 33.0 28.0 34.0 3 31.12480170393198 31.0 31.0 34.0 28.0 34.0 4 34.944376262023816 35.0 35.0 37.0 32.0 37.0 5 34.73822410345582 35.0 35.0 37.0 32.0 37.0 6 34.777477993747986 35.0 35.0 37.0 32.0 37.0 7 35.42354121729806 35.0 35.0 37.0 35.0 37.0 8 34.387653871600065 35.0 35.0 37.0 33.0 37.0 9 36.498198426420785 39.0 37.0 39.0 32.0 39.0 10 35.91757032285674 38.0 35.0 39.0 30.0 39.0 11 35.66531116188584 37.0 35.0 39.0 30.0 39.0 12 35.33177287137625 37.0 34.0 39.0 30.0 39.0 13 35.11569078356768 37.0 34.0 39.0 29.0 39.0 14 36.02464896984424 38.0 34.0 40.0 29.0 41.0 15 36.26397221764485 38.0 34.0 40.0 30.0 41.0 16 36.36481262405033 38.0 34.0 40.0 30.0 41.0 17 36.2938648118862 38.0 34.0 40.0 30.0 41.0 18 36.230413513400514 38.0 34.0 40.0 30.0 41.0 19 36.24838448654538 38.0 34.0 40.0 30.0 41.0 20 36.11829636315788 38.0 34.0 40.0 30.0 41.0 21 35.95456886438148 38.0 34.0 40.0 29.0 41.0 22 35.89515063122711 38.0 34.0 40.0 29.0 41.0 23 35.80441674516526 38.0 34.0 40.0 29.0 41.0 24 35.74668916276633 38.0 34.0 40.0 29.0 41.0 25 35.56935431111024 37.0 34.0 40.0 29.0 41.0 26 35.405921950667626 37.0 34.0 40.0 28.0 41.0 27 35.20733369569762 37.0 34.0 40.0 27.0 41.0 28 35.235401843138895 37.0 34.0 40.0 27.0 41.0 29 35.12490008337658 37.0 34.0 40.0 27.0 41.0 30 35.15552117740519 37.0 34.0 40.0 27.0 41.0 31 35.121477954396205 37.0 34.0 40.0 27.0 41.0 32 34.91086576370733 37.0 33.0 40.0 26.0 41.0 33 34.77719662853644 37.0 33.0 40.0 25.0 41.0 34 34.72286658025672 37.0 33.0 40.0 25.0 41.0 35 34.56558932976544 37.0 33.0 40.0 25.0 41.0 36 34.51649355983561 37.0 33.0 40.0 24.0 41.0 37 34.51915374001756 37.0 33.0 40.0 24.0 41.0 38 34.57351035074731 37.0 33.0 40.0 24.0 41.0 39 34.4868759361419 37.0 33.0 40.0 24.0 41.0 40 34.41237367464442 37.0 33.0 40.0 24.0 41.0 41 34.45981617800777 37.0 33.0 40.0 24.0 41.0 42 34.32788245623959 37.0 33.0 40.0 24.0 41.0 43 34.38321400726532 37.0 33.0 40.0 24.0 41.0 44 34.085945266596 36.0 33.0 40.0 23.0 41.0 45 34.01640182100352 36.0 33.0 40.0 23.0 41.0 46 33.9657019742295 36.0 32.0 40.0 23.0 41.0 47 33.92087341270915 36.0 32.0 40.0 23.0 41.0 48 33.92470824345961 36.0 32.0 40.0 23.0 41.0 49 33.944058004520535 36.0 32.0 40.0 24.0 41.0 50 33.357646173408526 35.0 31.0 39.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 5.0 12 5.0 13 8.0 14 35.0 15 75.0 16 200.0 17 542.0 18 1202.0 19 2328.0 20 4137.0 21 6386.0 22 9410.0 23 13487.0 24 19255.0 25 26390.0 26 34513.0 27 42766.0 28 50642.0 29 60693.0 30 74284.0 31 91197.0 32 111356.0 33 136856.0 34 185257.0 35 208206.0 36 188820.0 37 223584.0 38 270489.0 39 270815.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.58861159549324 24.683943736795634 28.26731662686398 13.460128040847144 2 29.66012361377214 26.022346890840627 30.201702456288782 14.11582703909845 3 29.109985759575395 25.981027524109113 30.884160663470972 14.024826052844519 4 25.317359790845302 29.684816854366446 29.975921630934433 15.021901723853818 5 22.99275189441918 33.37389845765626 29.094687755940274 14.538661891984288 6 21.11891861314497 42.65196549832878 26.099279616516924 10.129836272009326 7 90.52581353651968 3.2831680148749722 5.088529202708386 1.1024892458969622 8 88.84347584415713 5.271072262161544 4.620784133363175 1.264667760318159 9 85.42341283212286 5.812847863567386 6.440951427608716 2.322787876701042 10 37.66363575994432 39.508102777005774 12.261374508410212 10.566886954639699 11 31.07536111404883 25.025320409553625 28.551977549810744 15.3473409265868 12 30.344992117347005 24.07674580473156 28.61843286463726 16.959829213284177 13 22.443696214113025 31.092380757964435 29.73853203111742 16.725390996805128 14 18.503058370983965 34.13815917302239 29.778867603402947 17.5799148525907 15 17.43559220736419 26.394663898924957 39.43451495244584 16.735228941265014 16 20.21550017339377 24.64355897478781 37.10877569240683 18.03216515941159 17 20.67055429438573 23.194380566124515 29.827467049034773 26.30759809045498 18 21.802803322273846 24.877210155710067 33.221115180194246 20.098871341821837 19 25.849494206680458 25.739751936230444 28.331410835020133 20.07934302206897 20 28.13460275610014 25.320261984460966 27.842022287863173 18.70311297157572 21 24.46716463062208 27.31564306953705 29.89416831247279 18.323023987368078 22 23.19118323417505 25.281205344955225 28.667081499991394 22.86052992087833 23 20.061683911763474 29.881378984674946 28.76452633986655 21.29241076369503 24 19.82040832388481 26.84883260491553 34.89258194392863 18.438177127271025 25 19.9489410682532 27.6611024892459 32.732169340537986 19.657787101962914 26 19.530336531485112 31.516297784740853 28.584885474029054 20.368480209744977 27 19.454485979699403 30.800685704728853 29.493026127121 20.251802188450746 28 18.109540592588587 28.93408331263266 34.17711743308353 18.779258661695224 29 19.713322298438964 25.918654956233446 33.5837910027079 20.784231742619696 30 20.218303987564838 28.530334071998997 31.205369550086203 20.04599239034996 31 24.710948894338017 27.645361778110082 28.222111272070816 19.42157805548109 32 25.648455811642716 27.055478628295404 28.73117570814754 18.56488985191434 33 25.22704746070356 27.42897618971492 27.81344305920721 19.530533290374308 34 20.808629844880212 27.67949944538588 30.1151285450418 21.39674216469211 35 20.77616462816259 27.31574144898165 30.94904190718391 20.959052015671844 36 25.45897700134534 26.99881206820647 28.206075422601202 19.33613550784699 37 21.38105064327859 30.79429104082993 29.097983467334338 18.726674848557142 38 21.018817528265643 31.21166583454053 26.98853141624589 20.780985220947933 39 20.798004864863533 30.653264106997486 28.3338703211351 20.21486070700388 40 22.905243378448507 27.10274995142515 28.479717847752887 21.512288822373453 41 19.21778503599458 26.97406963788986 29.125234573488218 24.682910752627347 42 20.728352218087554 28.05466945736358 27.70429106542479 23.51268725912408 43 21.206082801059548 27.579693498840353 28.378190260926882 22.83603343917322 44 20.574880284513352 28.97751783742305 29.92068157279218 20.526920305271418 45 19.877861919530535 31.925457894827453 27.0046164554378 21.19206373020421 46 21.06864671695496 30.5155328845591 28.38256814621153 20.033252252274412 47 20.86150879635209 28.160328980862737 29.07825838869227 21.899903834092903 48 21.515387774878317 26.9025969713888 30.37642434989633 21.20559090383655 49 20.84945731438873 26.404452653662542 31.43951262823146 21.306577403717267 50 19.99394966415717 30.27042049834108 29.150075383249423 20.58555445425233 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 970.0 1 1554.0 2 2138.0 3 7369.0 4 12600.0 5 9658.0 6 6716.0 7 6981.5 8 7247.0 9 7486.5 10 7726.0 11 7730.5 12 7735.0 13 7777.5 14 7820.0 15 7752.0 16 7684.0 17 7769.5 18 7855.0 19 8608.0 20 9361.0 21 11142.5 22 12924.0 23 14424.0 24 15924.0 25 19089.5 26 22255.0 27 26319.0 28 30383.0 29 37413.0 30 44443.0 31 50321.0 32 56199.0 33 64375.0 34 72551.0 35 80057.0 36 87563.0 37 95137.5 38 102712.0 39 112670.0 40 122628.0 41 139030.0 42 155432.0 43 164723.5 44 174015.0 45 170733.0 46 167451.0 47 161225.0 48 154999.0 49 151170.0 50 147341.0 51 140150.0 52 132959.0 53 118248.5 54 103538.0 55 93930.0 56 84322.0 57 77652.0 58 70982.0 59 64197.5 60 57413.0 61 51838.0 62 46263.0 63 39223.5 64 32184.0 65 26733.0 66 21282.0 67 17423.0 68 13564.0 69 11389.0 70 9214.0 71 7899.5 72 6585.0 73 5265.0 74 3945.0 75 3286.5 76 2628.0 77 2217.5 78 1807.0 79 1403.5 80 1000.0 81 689.0 82 378.0 83 263.5 84 149.0 85 91.5 86 34.0 87 24.0 88 14.0 89 11.5 90 9.0 91 5.5 92 2.0 93 1.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2032945.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.78319799089871 #Duplication Level Percentage of deduplicated Percentage of total 1 78.17622355860227 17.02928155957793 2 7.549073203947966 3.288859124987732 3 2.86724834772051 1.8737351534241917 4 1.5583036705697015 1.3577934954385602 5 0.9138572300569898 0.995336648887284 6 0.6367274845726398 0.8321976517615631 7 0.45919709435768946 0.7001946856267263 8 0.33842690511499834 0.589761622365368 9 0.30379748029200543 0.5955912596103212 >10 4.585878798533634 25.484608141699944 >50 2.08770924599518 32.27355588259576 >100 0.522448688763724 14.396679967640852 >500 4.433165890715489E-4 0.05470607242852012 >1k 4.433165890715489E-4 0.22162477709347517 >5k 2.2165829453577444E-4 0.3060739568617732 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6339 0.31181364965604086 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 3432 0.1688191269316189 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.012395810019454535 0.0 2 0.0 0.0 0.0 0.053272469250274845 0.0 3 0.0 0.0 0.0 0.08450794291040829 0.0 4 0.0 0.0 0.0 0.13699337660389238 0.0 5 0.0 0.0 0.0 0.2332084734215633 0.0 6 0.0 0.0 0.0 0.41122607842317427 0.0 7 0.0 0.0 0.0 0.4982426971708531 0.0 8 0.0 0.0 0.0 0.7672612884263962 0.0 9 0.0 0.0 0.0 0.8901864044526536 0.0 10 0.0 0.0 0.0 1.062547191389831 0.0 11 0.0 0.0 0.0 1.1853739279714897 0.0 12 0.0 0.0 0.0 1.3044130559360927 0.0 13 0.0 0.0 0.0 1.3659493985326705 0.0 14 0.0 0.0 0.0 1.393790781354144 0.0 15 0.0 0.0 0.0 1.427879258907644 0.0 16 0.0 0.0 0.0 1.4918750876191929 0.0 17 0.0 0.0 0.0 1.5672829319042079 0.0 18 0.0 0.0 0.0 1.6898637198743693 0.0 19 0.0 0.0 0.0 1.7410702207880686 0.0 20 0.0 0.0 0.0 1.7966054172641168 0.0 21 0.0 0.0 0.0 1.8647823723711168 0.0 22 0.0 0.0 0.0 1.9381734380418556 0.0 23 0.0 0.0 0.0 2.0253868156787322 0.0 24 0.0 0.0 0.0 2.0930226838404384 0.0 25 0.0 0.0 0.0 2.1486562597610854 0.0 26 0.0 0.0 0.0 2.203306041235744 0.0 27 0.0 0.0 0.0 2.267400249391892 0.0 28 0.0 0.0 0.0 2.3300187658790574 0.0 29 0.0 0.0 0.0 2.399917361266537 0.0 30 0.0 0.0 0.0 2.4933286439131406 0.0 31 4.918972229942276E-5 0.0 0.0 2.5783284840465432 0.0 32 4.918972229942276E-5 0.0 0.0 2.657179608892518 0.0 33 4.918972229942276E-5 0.0 0.0 2.7368177692952833 0.0 34 4.918972229942276E-5 0.0 0.0 2.820538676648901 0.0 35 4.918972229942276E-5 0.0 0.0 2.9157699790205833 0.0 36 4.918972229942276E-5 0.0 0.0 3.0055904119393295 0.0 37 4.918972229942276E-5 0.0 0.0 3.09757519263925 0.0 38 9.837944459884552E-5 0.0 0.0 3.1947740839029093 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCATAT 20 7.85791E-4 44.000004 44 TACGTAC 20 7.85791E-4 44.000004 17 CGACGGT 150 0.0 44.0 28 TATAGCG 115 0.0 42.08696 1 CGGTCTA 160 0.0 41.250004 31 CGTTTTT 5765 0.0 40.79445 1 ACGGTCT 165 0.0 40.000004 30 TCGTTGA 55 7.8216544E-11 40.0 24 ACGGGAT 1290 0.0 39.395348 5 ATAGCGG 385 0.0 37.714287 2 CGCGCAC 35 7.2929706E-6 37.714287 34 TCGTCGG 35 7.2929706E-6 37.714287 2 TTCACGG 200 0.0 37.399998 2 TAACGGG 490 0.0 37.265305 3 GTTAACG 65 1.0913936E-11 37.230766 1 AGGGCGA 1880 0.0 36.978725 6 TGGGCGA 1280 0.0 36.95313 6 GACGGTC 185 0.0 36.864864 29 TAGGGAC 2435 0.0 36.862423 5 TACCGCT 30 1.3014476E-4 36.666664 44 >>END_MODULE