##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547181_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1536554 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.559071793116285 31.0 30.0 31.0 28.0 33.0 2 30.88050989421784 31.0 31.0 33.0 28.0 34.0 3 31.07241789094298 31.0 31.0 34.0 28.0 34.0 4 34.89995405303035 35.0 35.0 37.0 32.0 37.0 5 34.69466025925545 35.0 35.0 37.0 32.0 37.0 6 34.72037949854024 35.0 35.0 37.0 31.0 37.0 7 35.35626278022119 35.0 35.0 37.0 33.0 37.0 8 34.32069487958119 35.0 35.0 37.0 32.0 37.0 9 36.433971731549946 39.0 37.0 39.0 32.0 39.0 10 35.7468953255141 37.0 35.0 39.0 30.0 39.0 11 35.58421571907007 37.0 35.0 39.0 30.0 39.0 12 35.14755029761401 37.0 34.0 39.0 30.0 39.0 13 34.90339682171925 37.0 33.0 39.0 27.0 39.0 14 35.807224477629816 38.0 34.0 40.0 27.0 41.0 15 36.0376602449377 38.0 34.0 40.0 30.0 41.0 16 36.12594676138945 38.0 34.0 40.0 30.0 41.0 17 36.055652453477066 38.0 34.0 40.0 30.0 41.0 18 35.99509551893393 38.0 34.0 40.0 30.0 41.0 19 35.98597836457424 38.0 34.0 40.0 29.0 41.0 20 35.85845144394535 38.0 34.0 40.0 29.0 41.0 21 35.68650174351178 37.0 34.0 40.0 29.0 41.0 22 35.61960529860975 37.0 34.0 40.0 29.0 41.0 23 35.51023914551653 37.0 34.0 40.0 29.0 41.0 24 35.42118467688086 37.0 34.0 40.0 28.0 41.0 25 35.201400666686624 37.0 33.0 40.0 27.0 41.0 26 35.0194109676588 37.0 33.0 40.0 27.0 41.0 27 34.8160318478882 37.0 33.0 40.0 26.0 41.0 28 34.838577101748456 37.0 33.0 40.0 26.0 41.0 29 34.67623916894558 36.0 33.0 40.0 25.0 41.0 30 34.71496608645059 36.0 33.0 40.0 26.0 41.0 31 34.67573153953587 37.0 33.0 40.0 25.0 41.0 32 34.462634570604095 36.0 33.0 40.0 25.0 41.0 33 34.34539886004657 36.0 33.0 40.0 24.0 41.0 34 34.26154303721184 36.0 33.0 40.0 24.0 41.0 35 34.06630876623926 36.0 33.0 40.0 23.0 41.0 36 34.01587122873651 36.0 33.0 40.0 23.0 41.0 37 34.01018643015475 36.0 32.0 40.0 23.0 41.0 38 34.025069083156204 36.0 32.0 40.0 23.0 41.0 39 33.90538959255581 36.0 32.0 40.0 23.0 41.0 40 33.821084062128634 36.0 32.0 40.0 23.0 41.0 41 33.833197531619454 36.0 32.0 40.0 23.0 41.0 42 33.667854172388346 36.0 32.0 40.0 23.0 41.0 43 33.71445780623395 36.0 32.0 40.0 23.0 41.0 44 33.409855429747346 35.0 32.0 39.0 22.0 41.0 45 33.30271894121521 35.0 31.0 39.0 22.0 41.0 46 33.265928825150304 35.0 31.0 39.0 22.0 41.0 47 33.165704557080325 35.0 31.0 39.0 22.0 41.0 48 33.16787304578948 35.0 31.0 39.0 22.0 41.0 49 33.17732666733483 35.0 31.0 39.0 22.0 41.0 50 32.610320236060694 35.0 31.0 39.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 2.0 10 1.0 11 0.0 12 3.0 13 11.0 14 33.0 15 80.0 16 219.0 17 540.0 18 1227.0 19 2339.0 20 4030.0 21 6240.0 22 9024.0 23 13046.0 24 17766.0 25 23718.0 26 30607.0 27 37088.0 28 43757.0 29 51471.0 30 60552.0 31 72707.0 32 87327.0 33 106116.0 34 142325.0 35 158862.0 36 140964.0 37 162136.0 38 188331.0 39 176031.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.370480959341485 23.70128221982436 27.55731331277651 14.37092350805764 2 30.187809865452174 25.294783001443488 30.5299390714547 13.987468061649638 3 29.31013163221078 26.146559118651215 30.33235408583102 14.210955163306984 4 25.620446791977376 29.27524838046694 30.03200668508884 15.072298142466845 5 22.932874471056664 32.92289109266579 29.470360299735642 14.673874136541897 6 20.789116425455923 42.798170451542866 26.230317971252553 10.182395151748654 7 89.38735638317951 3.599678241051079 5.659482191969823 1.353483183799593 8 87.61078361059879 5.575072532432963 5.196693380122013 1.6174504768462419 9 85.05207106291091 4.562416940764854 7.331730612786794 3.0537813835374483 10 40.88167418782548 27.25566429816329 16.31215043532476 15.550511078686464 11 36.13468840014734 25.45924191404923 22.02005266329722 16.386017022506206 12 32.693221325121016 22.342202096379303 26.192050523444017 18.772526055055664 13 23.707790289179552 29.475827077994005 27.554124358792464 19.262258274033975 14 20.52065856455419 32.37679899307151 28.32819412789918 18.774348314475116 15 20.168376770357565 23.971171855984235 36.91630752970608 18.944143843952116 16 21.89926289606483 21.45456651702446 36.153301478503195 20.492869108407515 17 22.142599609255516 21.436539164910574 28.803803836376723 27.617057389457187 18 24.216005425126614 23.341646307256365 31.149897758230434 21.292450509386587 19 28.19432314126285 25.198723897760832 25.738242847306374 20.868710113669938 20 29.93106652938979 24.714198134266677 24.812404900836547 20.542330435506987 21 26.11128538274607 26.31765626199925 27.200085385869937 20.37097296938474 22 25.412188572611182 23.72588272198699 26.297481246998156 24.564447458403674 23 23.12857211656733 27.732185136350562 25.673682799302856 23.46555994777925 24 23.12375614524449 25.041814345607115 32.07488965568408 19.75953985346431 25 22.838247142632152 25.18342993477613 30.043916452008844 21.934406470582875 26 21.640502058502335 28.900318504914242 26.649893202581882 22.80928623400154 27 21.588567665047893 28.36886956136914 27.764530241045872 22.278032532537093 28 20.538035109732558 27.26763914577685 31.581252595092657 20.61307314939794 29 21.487822751429498 25.330642463590607 31.516367143621377 21.665167641358522 30 22.779153872886994 26.289085837529953 29.54826188991731 21.383498399665747 31 27.322046605586266 25.636391561897597 26.017048538482868 21.024513294033273 32 28.015351233995027 25.381014920399803 26.049263481791073 20.554370363814094 33 26.83719543862435 25.792064580873824 25.65070931447902 21.7200306660228 34 22.404289078027848 26.86661191210982 28.075681036917675 22.653417972944652 35 22.207745383501003 26.07236712800201 29.086969934021194 22.632917554475796 36 27.155049545932002 26.891733059820872 25.068887914124723 20.884329480122403 37 22.990796288317885 29.55229689291753 27.03452010147382 20.42238671729077 38 23.443822996132905 29.389204674876378 24.75897365143041 22.407998677560307 39 23.304875715399522 28.103014928209486 25.664506421512034 22.92760293487896 40 24.8158541775948 24.992548260588304 26.58259976544918 23.608997796367717 41 21.648506983809227 24.86355832596837 27.411662720607282 26.076271969615128 42 23.23042340197611 26.220751109300423 25.256059988780088 25.292765499943382 43 22.537834661196417 26.37850671047031 26.834071565333854 24.249587062999414 44 22.254538402164844 27.080987716669895 27.96185490389534 22.702618977269918 45 21.056728237341478 29.728470330362615 26.2133319102355 23.001469522060404 46 23.549839445929006 28.172325866842296 26.13458427103766 22.143250416191034 47 22.482255748903064 27.56661985195444 27.17314197873944 22.77798242040306 48 23.056397627418235 25.827533558859628 28.49766425390842 22.618404559813712 49 22.623350692523662 25.558685213796583 29.264705308111527 22.553258785568225 50 21.93388582503446 28.386441348628168 27.540587574533664 22.13908525180371 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1035.0 1 1496.5 2 1958.0 3 6704.0 4 11450.0 5 8465.0 6 5480.0 7 5603.5 8 5727.0 9 5948.5 10 6170.0 11 6194.0 12 6218.0 13 6278.5 14 6339.0 15 6056.0 16 5773.0 17 5595.5 18 5418.0 19 5584.0 20 5750.0 21 6180.0 22 6610.0 23 7078.0 24 7546.0 25 8346.0 26 9146.0 27 11322.5 28 13499.0 29 16524.0 30 19549.0 31 22395.0 32 25241.0 33 28860.0 34 32479.0 35 37451.0 36 42423.0 37 47309.0 38 52195.0 39 59686.5 40 67178.0 41 78511.0 42 89844.0 43 101066.0 44 112288.0 45 115211.5 46 118135.0 47 118675.5 48 119216.0 49 120021.5 50 120827.0 51 113777.5 52 106728.0 53 100263.0 54 93798.0 55 87121.0 56 80444.0 57 79390.5 58 78337.0 59 75253.5 60 72170.0 61 66668.5 62 61167.0 63 54163.5 64 47160.0 65 38664.0 66 30168.0 67 26649.0 68 23130.0 69 20159.0 70 17188.0 71 14148.0 72 11108.0 73 9589.5 74 8071.0 75 6347.5 76 4624.0 77 3534.5 78 2445.0 79 1928.5 80 1412.0 81 1054.0 82 696.0 83 493.0 84 290.0 85 184.0 86 78.0 87 52.0 88 26.0 89 17.0 90 8.0 91 8.0 92 8.0 93 5.5 94 3.0 95 2.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1536554.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 24.792052726905116 #Duplication Level Percentage of deduplicated Percentage of total 1 78.44931948590181 19.449196650843025 2 7.009404659936204 3.4755505982670547 3 2.6588779848903057 1.9775712958742304 4 1.35052776511357 1.339294222473798 5 0.8490213326662955 1.0524490822865022 6 0.633201755697399 0.9419022788411285 7 0.5142673177348926 0.8924819719905266 8 0.4222164979852419 0.8374090944175476 9 0.36409894524360725 0.8124084223461043 >10 6.0187825530844465 38.18807780574645 >50 1.625231043577344 26.83810240310653 >100 0.10272194900832807 3.421991686170293 >500 0.0018112182360043544 0.25178212239612385 >1k 2.5874546228633633E-4 0.12213838497890951 >5k 2.5874546228633633E-4 0.39964398026187303 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6230 0.4054527208285553 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 1904 0.12391364052288431 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.01835275558164568 0.0 2 0.0 0.0 0.0 0.0707427138909534 0.0 3 0.0 0.0 0.0 0.11467218203850955 0.0 4 0.0 0.0 0.0 0.1799481176711004 0.0 5 0.0 0.0 0.0 0.28863287590283193 0.0 6 0.0 0.0 0.0 0.5048309398823602 0.0 7 0.0 0.0 0.0 0.607137790146002 0.0 8 0.0 0.0 0.0 0.9155551968886222 0.0 9 0.0 0.0 0.0 1.0707726510099873 0.0 10 0.0 0.0 0.0 1.2982296749740003 0.0 11 0.0 0.0 0.0 1.460801247466734 0.0 12 0.0 0.0 0.0 1.6073629693456917 0.0 13 0.0 0.0 0.0 1.6818152827691055 0.0 14 0.0 0.0 0.0 1.721124021674474 0.0 15 0.0 0.0 0.0 1.761408970983122 0.0 16 0.0 0.0 0.0 1.8367724141162627 0.0 17 0.0 0.0 0.0 1.9195550563143242 0.0 18 0.0 0.0 0.0 2.0458116018050783 0.0 19 0.0 0.0 0.0 2.1036683383727484 0.0 20 0.0 0.0 0.0 2.165364835859983 0.0 21 0.0 0.0 0.0 2.2374742443155267 0.0 22 0.0 0.0 0.0 2.3151805924165374 0.0 23 0.0 0.0 0.0 2.405577675760175 0.0 24 0.0 0.0 0.0 2.4771013579737517 0.0 25 0.0 0.0 0.0 2.5385375326867785 0.0 26 0.0 0.0 0.0 2.601861047512811 0.0 27 0.0 0.0 0.0 2.669219565339064 0.0 28 0.0 0.0 0.0 2.732087515310233 0.0 29 0.0 0.0 0.0 2.8055636183303676 0.0 30 0.0 0.0 0.0 2.9078704685940098 0.0 31 0.0 0.0 0.0 2.9882451251306494 0.0 32 0.0 0.0 0.0 3.075062770328931 0.0 33 0.0 0.0 0.0 3.156804121430161 0.0 34 0.0 0.0 0.0 3.2389359566927034 0.0 35 0.0 0.0 0.0 3.338249095052956 0.0 36 0.0 0.0 0.0 3.42246351250916 0.0 37 0.0 0.0 0.0 3.5060271230298445 0.0 38 0.0 0.0 0.0 3.605145019309442 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTATACG 40 8.3164196E-9 44.0 1 TTTAGCG 110 0.0 42.0 1 CGTTTTT 4600 0.0 41.321735 1 ACGGGTC 120 0.0 40.333336 5 GGCGATA 700 0.0 39.285713 8 CGGTCTA 135 0.0 39.11111 31 GGGCGAT 3090 0.0 38.16181 7 CGAAAGG 255 0.0 37.96078 2 CGACGGT 145 0.0 37.931038 28 TGGGCGA 980 0.0 37.265305 6 TAGGGCG 865 0.0 37.13295 5 GTTGATC 895 0.0 37.11732 16 GCGGGAT 670 0.0 37.104477 5 ATAGGGC 1110 0.0 37.063065 4 AGGGCGA 1700 0.0 36.88235 6 GTAGCAT 905 0.0 36.70718 29 GGCGATT 865 0.0 36.62428 8 TTCATCG 205 0.0 36.487804 15 GGTACCT 925 0.0 36.38919 8 AGGGTAC 780 0.0 36.384617 6 >>END_MODULE