##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547177_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 273091 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.569150942359872 31.0 30.0 31.0 28.0 33.0 2 30.906525663606637 31.0 31.0 33.0 28.0 34.0 3 31.079046911102893 31.0 31.0 34.0 28.0 34.0 4 34.922231051188064 35.0 35.0 37.0 32.0 37.0 5 34.73404103394107 35.0 35.0 37.0 32.0 37.0 6 34.762262396051135 35.0 35.0 37.0 32.0 37.0 7 35.33293297838449 35.0 35.0 37.0 33.0 37.0 8 34.277325140704015 35.0 35.0 37.0 32.0 37.0 9 36.39572523444566 39.0 37.0 39.0 32.0 39.0 10 35.81904200431358 37.0 35.0 39.0 30.0 39.0 11 35.621291071474346 37.0 35.0 39.0 30.0 39.0 12 35.23583713853624 37.0 34.0 39.0 30.0 39.0 13 35.08912413810781 37.0 34.0 39.0 29.0 39.0 14 35.99303528860343 38.0 34.0 40.0 29.0 41.0 15 36.16750460469221 38.0 34.0 40.0 30.0 41.0 16 36.229220296531196 38.0 34.0 40.0 30.0 41.0 17 36.14517138975653 38.0 34.0 40.0 30.0 41.0 18 36.0720968468386 38.0 34.0 40.0 30.0 41.0 19 36.030876154834836 38.0 34.0 40.0 30.0 41.0 20 35.867304305158356 38.0 34.0 40.0 29.0 41.0 21 35.71841254380408 38.0 34.0 40.0 29.0 41.0 22 35.69528106015943 37.0 34.0 40.0 29.0 41.0 23 35.55626146595824 37.0 34.0 40.0 29.0 41.0 24 35.45818793003065 37.0 34.0 40.0 28.0 41.0 25 35.25131915735048 37.0 33.0 40.0 27.0 41.0 26 35.070401441277816 37.0 33.0 40.0 27.0 41.0 27 34.852389862719754 37.0 33.0 40.0 26.0 41.0 28 34.8415692937519 37.0 33.0 40.0 26.0 41.0 29 34.64290657692857 36.0 33.0 40.0 25.0 41.0 30 34.68732766733433 37.0 33.0 40.0 25.0 41.0 31 34.64849811967439 37.0 33.0 40.0 25.0 41.0 32 34.41170159397417 37.0 33.0 40.0 24.0 41.0 33 34.23371696613949 36.0 33.0 40.0 24.0 41.0 34 34.05915976725707 36.0 33.0 40.0 23.0 41.0 35 33.85240084806896 36.0 32.0 40.0 23.0 41.0 36 33.79510492839383 36.0 32.0 40.0 23.0 41.0 37 33.80809327293832 36.0 32.0 40.0 23.0 41.0 38 33.785049672087325 36.0 32.0 40.0 23.0 41.0 39 33.66710363944619 36.0 32.0 40.0 22.0 41.0 40 33.562504806090274 36.0 32.0 40.0 22.0 41.0 41 33.56588463186264 36.0 32.0 40.0 22.0 41.0 42 33.40548022454054 36.0 32.0 40.0 21.0 41.0 43 33.42910604889945 35.0 32.0 40.0 22.0 41.0 44 33.126060543921255 35.0 31.0 39.0 21.0 41.0 45 33.046361835432144 35.0 31.0 39.0 20.0 41.0 46 32.98445206909052 35.0 31.0 39.0 20.0 41.0 47 32.90707493106694 35.0 31.0 39.0 20.0 41.0 48 32.88201734952818 35.0 31.0 39.0 20.0 41.0 49 32.86853832605249 35.0 31.0 39.0 20.0 40.0 50 32.303126064205706 35.0 30.0 38.0 19.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 0.0 13 3.0 14 9.0 15 22.0 16 43.0 17 106.0 18 237.0 19 464.0 20 762.0 21 1169.0 22 1753.0 23 2389.0 24 3365.0 25 4434.0 26 5714.0 27 7011.0 28 8191.0 29 9136.0 30 10716.0 31 12599.0 32 15447.0 33 18535.0 34 24648.0 35 27444.0 36 25661.0 37 29481.0 38 33403.0 39 30347.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.00145372787826 24.632082346177647 26.875290654031076 15.491173271913025 2 32.09955655807038 25.656283070478338 28.921861211098133 13.322299160353143 3 29.2005229026222 25.681915551958873 31.47449018825227 13.643071357166658 4 25.85108992973038 28.694464482535125 30.106814212112447 15.347631375622045 5 22.28378086425404 33.027086209358785 29.920795632225154 14.76833729416202 6 20.893401833088603 41.41586504132322 27.38977117517604 10.300961950412134 7 87.89963784965451 3.47137034907778 7.111548897620207 1.5174429036475021 8 85.89957193755927 5.702128594497805 6.754158870120216 1.6441405978227037 9 83.15469934930115 4.859186132095163 8.966974378503869 3.0191401400998203 10 40.83510624663574 28.4963620185213 16.233050521621 14.435481213221966 11 34.27136009608518 24.4123753620588 24.314239575819048 17.002024966036963 12 31.418098728995098 21.564240491264815 28.279218282550506 18.73844249718958 13 24.044366163659735 26.636176219648394 28.93431127353153 20.385146343160336 14 20.83810890875203 28.95481725871596 29.950822253388065 20.25625157914395 15 20.25625157914395 23.09266874411826 36.5552141960006 20.095865480737192 16 23.49363399013516 20.735212804523034 34.68514158284235 21.08601162249946 17 22.762742089633125 21.691304363746884 29.614304389379363 25.931649157240628 18 24.388207593805728 22.815837944128514 31.28480982529633 21.511144636769426 19 28.122493967212392 24.439838735073657 26.482015152458338 20.95565214525561 20 29.14742704812682 24.09123698693842 26.214704988447075 20.54663097648769 21 25.614538743495757 25.65957867524012 28.649790729097628 20.076091852166495 22 25.332581447209908 23.065937727717134 27.855549981507995 23.745930843564967 23 23.89057127477654 25.94043743660538 27.341435638669893 22.827555649948188 24 23.753620588009124 23.934146493293447 31.855681805698467 20.456551112998962 25 23.70235562504806 24.441669626607982 29.534843696789714 22.321131051554243 26 21.919067270616754 27.007847201116114 27.685643247122755 23.38744228114438 27 21.813607918239708 26.320896697437853 28.683112955022317 23.182382429300123 28 21.332449623019436 26.18504454559103 31.197659388262522 21.284846443127016 29 22.544865997048603 24.398826764704808 30.89482992848538 22.161477309761217 30 23.16663676210494 25.44426583080365 30.27305916342904 21.11603824366237 31 26.772760728108945 24.96713549695889 26.96939847889531 21.29070529603685 32 27.933545960870187 24.33108377793483 26.819631551387634 20.915738709807354 33 27.259777876239056 24.908180789553665 25.818133882112555 22.01390745209472 34 23.00515212877759 26.105950031308247 28.158379441285142 22.73051839862903 35 23.513773797012718 25.69985828899524 28.27885210424364 22.507515809748398 36 26.587474504835384 27.145164066190393 24.998626831349256 21.268734597624967 37 24.093434056779607 28.68787327301156 26.277687657227812 20.94100501298102 38 24.157149082174072 28.996561585698537 25.2318824128221 21.61440691930529 39 23.667934864202774 28.108213013244672 25.219432350388697 23.00441977216386 40 24.6668692853298 25.208447001182755 27.090969676774407 23.033714036713036 41 22.01280891717413 24.936742697489116 27.33008411115709 25.72036427417967 42 23.079852503377996 26.52156240959973 25.034878483728868 25.363706603293405 43 22.746264065824214 25.464039459374348 26.98843975085228 24.801256723949162 44 22.780684826669496 25.746362933967067 28.159844154512598 23.313108084850835 45 21.68581168914391 28.434477884661156 26.179918049294926 23.699792376900007 46 23.105118806551662 27.596295740247754 26.973426440270824 22.325159012929756 47 22.716237444661303 26.441735538703213 27.29310010216375 23.548926914471732 48 23.10804823300658 25.53214862445119 28.768432500521808 22.591370642020426 49 23.159313195967645 24.99496504828061 29.090669410562782 22.755052345188968 50 22.229220296531192 26.960976377837426 27.67978439421292 23.130018931418466 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 155.0 1 247.0 2 339.0 3 1676.5 4 3014.0 5 2221.0 6 1428.0 7 1453.5 8 1479.0 9 1452.0 10 1425.0 11 1430.0 12 1435.0 13 1433.5 14 1432.0 15 1394.5 16 1357.0 17 1257.5 18 1158.0 19 1147.0 20 1136.0 21 1175.5 22 1215.0 23 1320.0 24 1425.0 25 1763.0 26 2101.0 27 2260.0 28 2419.0 29 2958.5 30 3498.0 31 4080.0 32 4662.0 33 5283.0 34 5904.0 35 6740.0 36 7576.0 37 8217.5 38 8859.0 39 9780.0 40 10701.0 41 12542.0 42 14383.0 43 15621.0 44 16859.0 45 17180.5 46 17502.0 47 17991.0 48 18480.0 49 18828.0 50 19176.0 51 18770.5 52 18365.0 53 17409.5 54 16454.0 55 15851.5 56 15249.0 57 14994.0 58 14739.0 59 14348.0 60 13957.0 61 13219.5 62 12482.0 63 11192.5 64 9903.0 65 8422.5 66 6942.0 67 6135.5 68 5329.0 69 4615.5 70 3902.0 71 3319.0 72 2736.0 73 2248.0 74 1760.0 75 1388.0 76 1016.0 77 814.5 78 613.0 79 456.0 80 299.0 81 209.5 82 120.0 83 89.0 84 58.0 85 46.0 86 34.0 87 22.5 88 11.0 89 6.5 90 2.0 91 2.0 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 273091.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.91593695957498 #Duplication Level Percentage of deduplicated Percentage of total 1 66.53013246584042 29.217331032820205 2 9.475847334761747 8.322814283839069 3 6.0753150864611385 8.004094630397464 4 4.505501364353832 7.914532555529677 5 3.471424701533906 7.622543417623719 6 2.6431192506027066 6.9645035031664495 7 1.9811829380138455 6.090385350784111 8 1.5138381407252801 5.318529628407327 9 1.1262379318717208 4.451381461580453 >10 2.6608019015160207 14.879079699495252 >50 0.01244916323954076 0.37468315648792655 >100 0.0033197768638775363 0.22233144499769958 >500 0.0 0.0 >1k 8.299442159693841E-4 0.6177898348706571 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1695 0.6206722301357424 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.011351527512807087 0.0 2 0.0 0.0 0.0 0.04540611005122835 0.0 3 0.0 0.0 0.0 0.07177094814548997 0.0 4 0.0 0.0 0.0 0.10985349205942342 0.0 5 0.0 0.0 0.0 0.17613176560194221 0.0 6 0.0 0.0 0.0 0.3573900274999908 0.0 7 0.0 0.0 0.0 0.45149785236423023 0.0 8 0.0 0.0 0.0 0.7100197370107401 0.0 9 0.0 0.0 0.0 0.837815966106536 0.0 10 0.0 0.0 0.0 1.0161448015496666 0.0 11 0.0 0.0 0.0 1.1413777824974094 0.0 12 0.0 0.0 0.0 1.2494003830225089 0.0 13 0.0 0.0 0.0 1.3156786565650278 0.0 14 0.0 0.0 0.0 1.3475361692622605 0.0 15 0.0 0.0 0.0 1.3790275036526287 0.0 16 0.0 0.0 0.0 1.425898326931316 0.0 17 0.0 0.0 0.0 1.471670615289409 0.0 18 0.0 0.0 0.0 1.5580886957094888 0.0 19 0.0 0.0 0.0 1.5914109216341805 0.0 20 0.0 0.0 0.0 1.6335214269236262 0.0 21 0.0 0.0 0.0 1.6862511031121494 0.0 22 0.0 0.0 0.0 1.7349528179251605 0.0 23 0.0 0.0 0.0 1.7983016650127612 0.0 24 0.0 0.0 0.0 1.851763697815014 0.0 25 0.0 0.0 0.0 1.8909447766495417 0.0 26 0.0 0.0 0.0 1.9323229253252578 0.0 27 0.0 0.0 0.0 1.9857849581275107 0.0 28 0.0 0.0 0.0 2.0337543163267924 0.0 29 0.0 0.0 0.0 2.0853854575947213 0.0 30 0.0 0.0 0.0 2.1593534755813995 0.0 31 0.0 0.0 0.0 2.2179420046797587 0.0 32 0.0 0.0 0.0 2.2900791311321136 0.0 33 0.0 0.0 0.0 2.351230908378526 0.0 34 0.0 0.0 0.0 2.417509181921045 0.0 35 0.0 0.0 0.0 2.4951389829763704 0.0 36 0.0 0.0 0.0 2.562881969746348 0.0 37 0.0 0.0 0.0 2.6372161660398916 0.0 38 0.0 0.0 0.0 2.7272960295286186 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTAATCG 40 8.272764E-9 44.000004 20 TTAGACG 20 7.8459264E-4 44.000004 1 CGTTGAT 40 8.272764E-9 44.000004 25 TAAGTAG 20 7.8459264E-4 44.000004 1 ATTGCGT 20 7.8459264E-4 44.000004 11 CTATACG 25 4.4338994E-5 44.0 1 ACGGGTA 25 4.4338994E-5 44.0 5 CGTTTTT 1230 0.0 41.674797 1 TTACGGG 75 0.0 41.066666 3 GCCCTAC 170 0.0 40.117645 26 AAGGGTG 110 0.0 40.0 5 GTCTCAA 160 0.0 39.875004 42 ACTAATC 185 0.0 39.24324 10 TCGTTGA 45 2.339766E-8 39.11111 24 TATGGCC 45 2.339766E-8 39.11111 10 ACGGGAT 90 0.0 39.11111 5 ATCGTTG 45 2.339766E-8 39.11111 23 GTTACGG 45 2.339766E-8 39.11111 2 TAATCGT 45 2.339766E-8 39.11111 21 TACGGGA 80 0.0 38.500004 4 >>END_MODULE