##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547175_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1100266 Sequences flagged as poor quality 0 Sequence length 50 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.663518640037953 31.0 30.0 31.0 28.0 34.0 2 31.01117366164182 31.0 31.0 33.0 28.0 34.0 3 31.091475152372244 31.0 31.0 34.0 28.0 34.0 4 34.92996966188176 35.0 35.0 37.0 32.0 37.0 5 34.76083510714682 35.0 35.0 37.0 32.0 37.0 6 34.805590648079644 35.0 35.0 37.0 32.0 37.0 7 35.49286627052004 36.0 35.0 37.0 35.0 37.0 8 34.47570678363232 37.0 35.0 37.0 33.0 37.0 9 36.590589911894035 39.0 37.0 39.0 32.0 39.0 10 36.022122832115144 38.0 35.0 39.0 30.0 39.0 11 35.74846173561666 37.0 35.0 39.0 30.0 39.0 12 35.63825929366171 37.0 35.0 39.0 30.0 39.0 13 35.60368220048606 37.0 35.0 39.0 30.0 39.0 14 36.57179627471902 38.0 35.0 40.0 30.0 41.0 15 36.67712353194591 38.0 35.0 40.0 31.0 41.0 16 36.68705113127189 38.0 35.0 40.0 31.0 41.0 17 36.6019598896994 38.0 35.0 40.0 31.0 41.0 18 36.41684283618689 38.0 35.0 40.0 30.0 41.0 19 36.32181672431939 38.0 35.0 40.0 30.0 41.0 20 36.10906089981877 38.0 34.0 40.0 30.0 41.0 21 35.95862909514608 38.0 34.0 40.0 30.0 41.0 22 35.917183662859706 38.0 34.0 40.0 30.0 41.0 23 35.787148744030986 37.0 34.0 40.0 29.0 41.0 24 35.678235081334876 37.0 34.0 40.0 29.0 41.0 25 35.49704071560877 37.0 34.0 40.0 29.0 41.0 26 35.32915131431854 37.0 34.0 40.0 27.0 41.0 27 35.15403820530672 37.0 33.0 40.0 27.0 41.0 28 35.15902245457008 37.0 34.0 40.0 27.0 41.0 29 35.01803836526803 37.0 33.0 40.0 27.0 41.0 30 34.953340374055 37.0 33.0 40.0 26.0 41.0 31 34.811291996662625 37.0 33.0 40.0 25.0 41.0 32 34.394131964452235 37.0 33.0 40.0 24.0 41.0 33 34.043562193142385 37.0 33.0 40.0 22.0 41.0 34 33.75922186089546 37.0 33.0 40.0 20.0 41.0 35 33.438686644865875 37.0 32.0 40.0 18.0 41.0 36 33.32213119372952 37.0 32.0 40.0 18.0 41.0 37 33.30468086808099 37.0 32.0 40.0 17.0 41.0 38 33.30228508378883 37.0 32.0 40.0 17.0 41.0 39 33.18572145281232 37.0 31.0 40.0 16.0 41.0 40 33.15175693877662 37.0 31.0 40.0 16.0 41.0 41 33.150370910307146 37.0 31.0 40.0 15.0 41.0 42 33.00679108506488 37.0 31.0 40.0 15.0 41.0 43 33.05517393066768 37.0 31.0 40.0 15.0 41.0 44 32.76764527850538 36.0 31.0 40.0 15.0 41.0 45 32.71660762033908 36.0 31.0 40.0 15.0 41.0 46 32.67551119456568 36.0 31.0 40.0 15.0 41.0 47 32.60806932141864 36.0 31.0 40.0 14.0 41.0 48 32.59161784513927 36.0 31.0 40.0 14.0 41.0 49 32.593052043778506 36.0 31.0 40.0 14.0 41.0 50 32.06790267080869 35.0 30.0 39.0 12.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 0.0 12 2.0 13 6.0 14 13.0 15 53.0 16 178.0 17 465.0 18 1041.0 19 2019.0 20 3579.0 21 5345.0 22 7843.0 23 11034.0 24 15099.0 25 21433.0 26 29177.0 27 33146.0 28 33937.0 29 35318.0 30 39351.0 31 45791.0 32 54768.0 33 66544.0 34 86021.0 35 98510.0 36 99571.0 37 117212.0 38 143930.0 39 148879.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.605446319344598 23.890495571070996 26.676276464055054 20.827781645529353 2 35.91231574910067 24.664944658837047 26.896950373818697 12.525789218243588 3 26.075330874533975 24.926426882226664 36.30385743083945 12.694384812399912 4 23.22656521241227 27.214782607115005 35.84551372122741 13.713138459245311 5 20.525945544077523 31.234356055717438 35.08978737868843 13.149911021516614 6 19.172181999625547 39.32085513866647 32.16513097741819 9.3418318842898 7 83.99459767001798 2.4860351951255426 12.471166063479195 1.0482010713772851 8 82.37980633774015 4.8722763404485825 11.693263265428541 1.0546540563827291 9 79.16949174108807 5.24445906717103 13.551904721221957 2.0341444705189473 10 32.282011804418204 38.54477008287087 19.278429034433493 9.894789078277434 11 23.29136772380497 25.121925061757793 36.35366356862795 15.233043645809285 12 23.432697184135474 23.572390676436424 36.23687362874068 16.758038510687413 13 20.368619951902538 27.1896068768825 36.501173352625635 15.940599818589323 14 17.97210856283844 29.859506701106824 35.48241970578024 16.685965030274495 15 17.245647870605836 26.30472994712188 40.65953142240149 15.790090759870795 16 19.952356975495018 24.710842650777177 39.176162855164115 16.160637518563693 17 19.96571738106967 24.067634553826075 35.56203681655163 20.404611248552623 18 20.591202491033986 24.29148951253606 37.29089147533415 17.82641652109581 19 22.080751381938548 26.070241196219822 34.303977401828284 17.545030020013343 20 24.199875302881306 25.260346134480205 33.858176113776125 16.681602448862364 21 22.227443181921462 25.480656495792836 35.252747971854085 17.03915235043162 22 21.757556808989825 23.849323708994007 35.048161081047674 19.344958400968494 23 18.898975338690825 27.41637022320057 34.61744705371246 19.067207384396138 24 18.5142501904085 26.11141305829681 37.905379244655386 17.468957506639306 25 18.498435832789525 27.682305915115073 35.77580330574607 18.04345494634934 26 18.984772773129407 28.722872469021127 34.24453723008799 18.04781752776147 27 18.281760955987007 27.801731581272165 35.41379993565192 18.502707527088905 28 17.560117280730296 27.391739815644577 37.37723423244925 17.67090867117588 29 18.515340835761535 25.340054132364354 37.116660880187155 19.027944151686956 30 19.090747146599096 26.335722452570558 36.44191495511085 18.13161544571949 31 21.091081611174026 26.779524224142158 33.53752637998448 18.591867784699335 32 21.239409379186487 26.899404325863017 33.973875408310356 17.88731088664014 33 20.760979617656094 27.677398011026426 32.83333303037629 18.72828934094119 34 19.346867030336302 28.051852915567686 33.11417420878224 19.48710584531377 35 19.422030672582814 28.57899816953355 32.27655857765304 19.7224125802306 36 21.783823184575365 28.855476766527367 30.69439571885344 18.666304330043825 37 20.101957163086016 29.961300267389884 31.359325835752443 18.577416733771653 38 20.12104345676409 30.0449164111224 30.993505206922688 18.84053492519082 39 20.157489188977937 30.191971759556324 30.683852813774127 18.96668623769161 40 21.60068565237861 28.059305658813415 30.777557427022195 19.56245126178579 41 19.220897492061013 28.747684650802626 31.08720982017076 20.944208036965605 42 20.29990929466147 29.416432026437246 29.60874915702203 20.674909521879254 43 20.46768690480302 28.835572488834515 30.575515375372863 20.121225230989598 44 20.40015778002774 29.578665522700874 30.55597464613103 19.46520205114036 45 19.535548676410976 30.490445037836306 29.583755201015027 20.39025108473769 46 20.20365984225633 29.93476123046609 30.295673955207196 19.565904972070392 47 20.36434825760316 28.946727427731112 30.67176482777801 20.017159486887717 48 20.75843477849902 27.971236046556015 31.300521873801422 19.96980730114354 49 20.4886818278489 27.54088556767182 31.382774710842646 20.587657893636628 50 19.181725146464583 29.910039935797343 31.14792241148959 19.76031250624849 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 689.0 1 926.0 2 1163.0 3 12207.5 4 23252.0 5 17682.5 6 12113.0 7 12191.0 8 12269.0 9 12480.5 10 12692.0 11 12734.5 12 12777.0 13 12472.5 14 12168.0 15 11633.0 16 11098.0 17 10516.5 18 9935.0 19 9482.5 20 9030.0 21 9191.5 22 9353.0 23 9952.5 24 10552.0 25 11883.0 26 13214.0 27 15891.0 28 18568.0 29 21425.0 30 24282.0 31 27759.0 32 31236.0 33 35400.5 34 39565.0 35 44098.5 36 48632.0 37 51624.5 38 54617.0 39 58958.0 40 63299.0 41 69768.0 42 76237.0 43 79262.5 44 82288.0 45 83055.0 46 83822.0 47 83556.5 48 83291.0 49 80072.5 50 76854.0 51 71209.0 52 65564.0 53 59397.5 54 53231.0 55 47693.0 56 42155.0 57 37451.5 58 32748.0 59 29486.5 60 26225.0 61 22500.0 62 18775.0 63 15469.5 64 12164.0 65 9495.0 66 6826.0 67 5230.5 68 3635.0 69 3071.5 70 2508.0 71 1958.5 72 1409.0 73 1115.0 74 821.0 75 693.5 76 566.0 77 489.5 78 413.0 79 264.5 80 116.0 81 95.5 82 75.0 83 47.0 84 19.0 85 16.0 86 13.0 87 8.0 88 3.0 89 2.5 90 2.0 91 1.0 92 0.0 93 1.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1100266.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.5804286938488 #Duplication Level Percentage of deduplicated Percentage of total 1 75.21856983909191 27.515275304521886 2 7.178339838336124 5.251734971929375 3 3.1338406864177206 3.4391170730215683 4 2.005951046642565 2.935141969002389 5 1.5500882567123493 2.8351446471919246 6 1.244873922001374 2.7322813041961895 7 1.047219585799383 2.6815418969595344 8 0.9306042702992068 2.723352252149706 9 0.8176587710747462 2.691927753407982 >10 6.808113218937882 44.18992724530081 >50 0.05542312171049771 1.2495189970194192 >100 0.008336659529201769 0.4714300822095267 >500 7.355875852844981E-4 0.14898123133478133 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 2.4519586176149937E-4 1.1346252717549572 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12650 1.1497219763220894 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.013451292687404682 0.0 2 0.0 0.0 0.0 0.05144210581804764 0.0 3 0.0 0.0 0.0 0.10488372811665543 0.0 4 0.0 0.0 0.0 0.15441720456689564 0.0 5 0.0 0.0 0.0 0.24939423739350303 0.0 6 0.0 0.0 0.0 0.4909721830902709 0.0 7 0.0 0.0 0.0 0.6175779311548298 0.0 8 0.0 0.0 0.0 0.926775888739632 0.0 9 0.0 0.0 0.0 1.128272617712444 0.0 10 0.0 0.0 0.0 1.3711229829877503 0.0 11 0.0 0.0 0.0 1.5105438139504448 0.0 12 0.0 0.0 0.0 1.6500555320258918 0.0 13 0.0 0.0 0.0 1.7484862751371033 0.0 14 0.0 0.0 0.0 1.80256410722498 0.0 15 0.0 0.0 0.0 1.8479167764885946 0.0 16 0.0 0.0 0.0 1.9139917074598325 0.0 17 0.0 0.0 0.0 1.9896097852701073 0.0 18 0.0 0.0 0.0 2.0994923045881633 0.0 19 0.0 0.0 0.0 2.1568420727351385 0.0 20 0.0 0.0 0.0 2.2194632934217724 0.0 21 0.0 0.0 0.0 2.2823571754466645 0.0 22 0.0 0.0 0.0 2.359156785722725 0.0 23 0.0 0.0 0.0 2.441682284102208 0.0 24 0.0 0.0 0.0 2.509120521764737 0.0 25 0.0 0.0 0.0 2.565924967235196 0.0 26 0.0 0.0 0.0 2.6254560260882367 0.0 27 0.0 0.0 0.0 2.697256845162897 0.0 28 0.0 0.0 0.0 2.772874922973172 0.0 29 0.0 0.0 0.0 2.8514922755042873 0.0 30 0.0 0.0 0.0 2.953831164463866 0.0 31 0.0 0.0 0.0 3.043082309187051 0.0 32 0.0 0.0 0.0 3.1335149863760217 0.0 33 0.0 0.0 0.0 3.222402582648196 0.0 34 0.0 0.0 0.0 3.3181067123768253 0.0 35 0.0 0.0 0.0 3.418446084855844 0.0 36 0.0 0.0 0.0 3.509696746059589 0.0 37 0.0 0.0 0.0 3.612035635019168 0.0 38 0.0 0.0 0.0 3.7189188796163837 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGTTTCG 20 7.856334E-4 44.000004 38 CGACGGT 30 2.5276167E-6 44.000004 28 GTAATCG 20 7.856334E-4 44.000004 1 AATCGCG 30 2.5276167E-6 44.000004 1 ACGGGTC 45 4.802132E-10 44.0 5 CGTTTTT 11390 0.0 43.053555 1 TCGTTGA 60 3.6379788E-12 40.333336 24 CGCCGGT 60 3.6379788E-12 40.333336 28 TACGGGA 410 0.0 39.17073 4 ACGGGCG 135 0.0 39.11111 5 CGTTAGG 90 0.0 39.11111 2 GCTAACG 45 2.3508619E-8 39.11111 1 AGGGCGA 1110 0.0 38.648647 6 GCGTTAG 40 4.124322E-7 38.500004 1 CAACGGG 185 0.0 38.054054 3 ATAGGGA 1920 0.0 37.927086 4 ACGGGAA 430 0.0 37.860466 5 GTTTTTT 12820 0.0 37.633385 2 AATGCGG 170 0.0 37.52941 2 GGGCGAT 2170 0.0 37.308758 7 >>END_MODULE