##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547167_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2264679 Sequences flagged as poor quality 0 Sequence length 50 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.609797238372416 31.0 30.0 31.0 27.0 34.0 2 30.95190223426808 31.0 31.0 33.0 28.0 34.0 3 31.02328939333124 31.0 31.0 34.0 28.0 34.0 4 34.86888958655951 35.0 35.0 37.0 32.0 37.0 5 34.70033413123891 35.0 35.0 37.0 32.0 37.0 6 34.74364048944685 35.0 35.0 37.0 32.0 37.0 7 35.46180319594963 35.0 35.0 37.0 35.0 37.0 8 34.44580534371538 37.0 35.0 37.0 33.0 37.0 9 36.56117092091197 39.0 37.0 39.0 32.0 39.0 10 35.962024198572955 38.0 35.0 39.0 30.0 39.0 11 35.707175277379264 37.0 35.0 39.0 30.0 39.0 12 35.538345611011536 37.0 35.0 39.0 30.0 39.0 13 35.45142777409072 37.0 35.0 39.0 30.0 39.0 14 36.42329354402986 38.0 35.0 40.0 30.0 41.0 15 36.57166600652896 38.0 35.0 40.0 30.0 41.0 16 36.60109534287199 38.0 35.0 40.0 31.0 41.0 17 36.50870520722805 38.0 35.0 40.0 30.0 41.0 18 36.302119638147396 38.0 35.0 40.0 30.0 41.0 19 36.16078128511811 37.0 35.0 40.0 30.0 41.0 20 35.903891456581704 37.0 34.0 40.0 30.0 41.0 21 35.74239439673349 37.0 34.0 40.0 29.0 41.0 22 35.69915250682326 37.0 34.0 40.0 29.0 41.0 23 35.5676314391576 37.0 34.0 40.0 29.0 41.0 24 35.420868476282955 37.0 34.0 40.0 29.0 41.0 25 35.23725614093653 37.0 34.0 40.0 27.0 41.0 26 35.08430775399074 37.0 33.0 40.0 27.0 41.0 27 34.888267167223255 36.0 33.0 40.0 27.0 41.0 28 34.90103807206231 36.0 33.0 40.0 27.0 41.0 29 34.75379733728268 36.0 33.0 40.0 26.0 41.0 30 34.662321680026174 36.0 33.0 40.0 25.0 41.0 31 34.48207450150772 36.0 33.0 40.0 24.0 41.0 32 34.005206477385975 36.0 33.0 40.0 23.0 41.0 33 33.56342466194988 36.0 32.0 40.0 20.0 41.0 34 33.20961867001902 36.0 31.0 40.0 18.0 41.0 35 32.83338919113923 36.0 31.0 40.0 15.0 41.0 36 32.683706167629055 36.0 31.0 40.0 15.0 41.0 37 32.632792550290795 36.0 31.0 40.0 15.0 41.0 38 32.63554746610888 36.0 31.0 40.0 13.0 41.0 39 32.521925623896365 36.0 31.0 40.0 12.0 41.0 40 32.47999959376141 36.0 30.0 40.0 12.0 41.0 41 32.48780908905854 36.0 31.0 40.0 12.0 41.0 42 32.34360410459937 36.0 30.0 40.0 10.0 41.0 43 32.383153638992546 36.0 30.0 40.0 10.0 41.0 44 32.00867496011576 36.0 30.0 40.0 10.0 41.0 45 31.990078505607197 36.0 30.0 40.0 10.0 41.0 46 31.953001727838693 35.0 30.0 40.0 10.0 41.0 47 31.91818619769071 35.0 30.0 40.0 10.0 41.0 48 31.916329422403795 35.0 30.0 39.0 10.0 41.0 49 31.923666444560133 35.0 30.0 39.0 10.0 41.0 50 31.39428545944039 35.0 29.0 39.0 10.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 0.0 9 0.0 10 0.0 11 0.0 12 4.0 13 11.0 14 34.0 15 132.0 16 411.0 17 1191.0 18 2904.0 19 5464.0 20 9036.0 21 13468.0 22 19152.0 23 26728.0 24 37096.0 25 51953.0 26 69118.0 27 77283.0 28 75306.0 29 76050.0 30 83693.0 31 97074.0 32 114190.0 33 136574.0 34 177620.0 35 203752.0 36 196981.0 37 230530.0 38 279554.0 39 279369.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 27.92819644638379 23.297385633902202 25.85854330790368 22.915874611810327 2 35.900849524369676 24.533852258973567 27.28532388033801 12.279974336318746 3 25.39604950635388 24.603663477252187 38.10743156094087 11.89285545545307 4 21.99834943495303 27.27070812243148 37.381854117073544 13.349088325541942 5 20.32981274608896 30.514169999368562 36.65451041847432 12.501506836068158 6 18.375628510707255 38.699921710759014 33.630947255659635 9.293502522874103 7 82.09229652414317 2.6168388544248433 14.234997542698105 1.0558670787338955 8 80.64670533881402 4.803506368893781 13.503768083688684 1.046020208603515 9 77.60755497799026 5.163557395992986 15.235183441008637 1.993704185008118 10 32.909078946729316 35.68995870938 21.319401116008052 10.081561227882627 11 24.50002848085755 24.637134004421817 36.28072676083454 14.582110753886091 12 24.23924096969151 22.83184504293986 36.741012743969456 16.187901243399175 13 19.944725058164973 28.142531458100684 36.65746889515027 15.255274588584077 14 17.397388327440666 30.208961181695067 35.97185296459233 16.421797526271938 15 16.77902254580009 25.45407097429702 42.46049881683011 15.306407663072779 16 18.661761777276162 24.0763922834097 41.263375515911974 15.99847042340217 17 18.816971411842474 23.18478689474314 36.52654526314767 21.471696430266718 18 20.00014130037855 24.144172308746626 37.99143278142289 17.864253609451936 19 22.657339075427466 25.384259756018402 34.55094518914159 17.407455979412532 20 23.936769846852467 24.84237280426939 34.62530451335487 16.595552835523268 21 21.8871195432112 25.22547345561998 35.92027832642065 16.967128674748167 22 21.12458321907873 23.797103253926934 35.75482441440928 19.32348911258505 23 18.57614257914698 27.191447441337164 35.568970260244384 18.663439719271473 24 18.460585363311974 25.35264379631727 39.303450952651566 16.883319887719185 25 18.249606235585706 26.925979355131567 37.14897343067163 17.675440978611096 26 18.253801090573983 29.141083570784204 34.879291943803075 17.725823394838738 27 17.887347390071618 28.014477990037438 36.36524204975628 17.732932570134665 28 17.105161482046682 26.90774277502463 38.862726240672515 17.12436950225617 29 18.081812036054558 24.979875735148337 38.528374219922554 18.409938008874548 30 18.649574619626005 26.710981997890208 36.92819158918328 17.71125179330051 31 21.17218378410362 26.438978769176558 34.29329278012469 18.095544666595135 32 21.24967821046603 26.49810414632714 34.33612445737343 17.9160931858334 33 21.51633851861566 27.553220566799975 32.76601231344486 18.164428601139498 34 19.025212844734288 27.789942857243787 33.31143177465769 19.87341252336424 35 19.753704608909253 27.620161621139243 32.8828059075922 19.7433278623593 36 22.50243853543924 27.807737873667747 30.784230347877116 18.905593243015897 37 19.827401587598064 29.709022779828842 31.980735459639092 18.482840172934 38 20.257175520239294 29.97669868444932 30.522118145662148 19.244007649649244 39 20.233816801409823 29.75640256301224 30.62853499325953 19.381245642318405 40 21.44639483123215 28.055057692503 30.678520002172494 19.820027474092356 41 19.100676078155004 27.947934343012854 31.27560241429359 21.67578716453855 42 20.313651515292015 28.949224150530828 29.170005992019178 21.567118342157983 43 20.575410466560605 28.865636145343338 30.04628912088645 20.512664267209612 44 19.861269522082377 30.23064195852922 30.370838427874325 19.537250091514075 45 19.513891372684604 30.893075795730873 29.090392059978477 20.502640771606043 46 20.33471410297 30.353308349660153 29.74359721620592 19.568380331163933 47 20.173190107737124 28.862854294140583 30.768687306236338 20.19526829188596 48 20.96747486067562 27.6512477044208 30.90190706939041 20.47937036551317 49 19.88021260408208 27.62775651648644 31.679324089639195 20.812706789792284 50 19.177331533519762 29.911391415737064 30.688499341407766 20.222777709335407 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1445.0 1 1919.5 2 2394.0 3 26280.0 4 50166.0 5 38596.0 6 27026.0 7 27700.0 8 28374.0 9 28986.0 10 29598.0 11 29667.5 12 29737.0 13 29183.5 14 28630.0 15 27605.0 16 26580.0 17 25486.0 18 24392.0 19 23300.0 20 22208.0 21 22418.5 22 22629.0 23 23067.5 24 23506.0 25 25394.0 26 27282.0 27 31741.0 28 36200.0 29 41149.0 30 46098.0 31 53294.5 32 60491.0 33 67970.0 34 75449.0 35 85524.5 36 95600.0 37 102407.0 38 109214.0 39 118750.0 40 128286.0 41 140176.5 42 152067.0 43 160639.0 44 169211.0 45 169465.5 46 169720.0 47 165123.5 48 160527.0 49 160478.0 50 160429.0 51 151571.0 52 142713.0 53 125987.0 54 109261.0 55 97956.5 56 86652.0 57 76890.5 58 67129.0 59 59722.0 60 52315.0 61 45609.0 62 38903.0 63 31590.5 64 24278.0 65 19454.0 66 14630.0 67 10971.0 68 7312.0 69 6570.0 70 5828.0 71 4709.5 72 3591.0 73 2948.5 74 2306.0 75 1761.0 76 1216.0 77 945.0 78 674.0 79 499.5 80 325.0 81 240.5 82 156.0 83 118.0 84 80.0 85 48.5 86 17.0 87 17.0 88 17.0 89 13.0 90 9.0 91 7.0 92 5.0 93 3.0 94 1.0 95 1.5 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2264679.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.306562006935202 #Duplication Level Percentage of deduplicated Percentage of total 1 79.4172831948981 24.06864817568512 2 5.881612560157582 3.565029115103693 3 2.5420715197358095 2.3112434441681193 4 1.5732401922716264 1.9071800575553082 5 1.1343235190656478 1.7188723033243998 6 0.8696815629281935 1.5814234927902966 7 0.726779072479946 1.5418322517819434 8 0.5889639843024864 1.427957880809193 9 0.494390892855299 1.3484959424984857 >10 5.938899278974209 41.56671556684814 >50 0.7824208488844315 15.264404249632973 >100 0.04884437122385105 2.110871538802168 >500 8.934013336996852E-4 0.15807826329619826 >1k 4.467006668498426E-4 0.1782498258692501 >5k 0.0 0.0 >10k+ 1.4890022228328088E-4 1.2509978918347724 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 27722 1.22410284194802 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.01783917279225886 0.0 2 0.0 0.0 0.0 0.07016446922499833 0.0 3 0.0 0.0 0.0 0.12849503174622098 0.0 4 0.0 0.0 0.0 0.18302814659384398 0.0 5 0.0 0.0 0.0 0.28829692861549033 0.0 6 0.0 0.0 0.0 0.5411804498562489 0.0 7 0.0 0.0 0.0 0.6847328031919756 0.0 8 0.0 0.0 0.0 0.9893234317093063 0.0 9 0.0 0.0 0.0 1.1747801785595222 0.0 10 0.0 0.0 0.0 1.413401192840133 0.0 11 0.0 0.0 0.0 1.5521846583997114 0.0 12 0.0 0.0 0.0 1.6929551605326847 0.0 13 4.415636829767044E-5 0.0 0.0 1.7798990497107978 0.0 14 4.415636829767044E-5 0.0 0.0 1.8254684217939938 0.0 15 4.415636829767044E-5 0.0 0.0 1.8642377131593484 0.0 16 4.415636829767044E-5 0.0 0.0 1.927116381615231 0.0 17 4.415636829767044E-5 0.0 0.0 1.9952496578985366 0.0 18 4.415636829767044E-5 0.0 0.0 2.107097738796536 0.0 19 4.415636829767044E-5 0.0 0.0 2.161851635485647 0.0 20 4.415636829767044E-5 0.0 0.0 2.222036765475372 0.0 21 4.415636829767044E-5 0.0 0.0 2.2895076962342125 0.0 22 4.415636829767044E-5 0.0 0.0 2.36196829661069 0.0 23 4.415636829767044E-5 0.0 0.0 2.444849799905417 0.0 24 4.415636829767044E-5 0.0 0.0 2.516780523862322 0.0 25 4.415636829767044E-5 0.0 0.0 2.581911167101386 0.0 26 4.415636829767044E-5 0.0 0.0 2.6468210284989615 0.0 27 4.415636829767044E-5 0.0 0.0 2.720473850819476 0.0 28 4.415636829767044E-5 0.0 0.0 2.7890045344174603 0.0 29 4.415636829767044E-5 0.0 0.0 2.875462703544299 0.0 30 4.415636829767044E-5 0.0 0.0 2.991108232115898 0.0 31 4.415636829767044E-5 0.0 0.0 3.0817612562310157 0.0 32 4.415636829767044E-5 0.0 0.0 3.1707363383508214 0.0 33 4.415636829767044E-5 0.0 0.0 3.265760842927408 0.0 34 4.415636829767044E-5 0.0 0.0 3.3585775290891116 0.0 35 4.415636829767044E-5 0.0 0.0 3.4587683287565256 0.0 36 4.415636829767044E-5 0.0 0.0 3.558252626531177 0.0 37 4.415636829767044E-5 0.0 0.0 3.6577810806741264 0.0 38 4.415636829767044E-5 0.0 0.0 3.770909696252758 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTATGCG 40 8.3182385E-9 44.0 1 CGTCGAT 20 7.858103E-4 44.0 40 CGTTTTT 27885 0.0 43.337276 1 CATACGA 315 0.0 39.80952 18 GAGTACG 95 0.0 39.36842 1 CGATCGA 45 2.3526809E-8 39.11111 10 GTTTTTT 30855 0.0 38.38859 2 TAGTACG 75 0.0 38.13333 1 GTTCGCC 35 7.293338E-6 37.714287 31 CGAGGGA 1495 0.0 37.67224 4 CTACGCG 65 1.0913936E-11 37.23077 1 TGTACGG 305 0.0 36.786884 2 CGTAAGG 425 0.0 36.75294 2 CGACGGT 120 0.0 36.666664 28 AGGGATT 5135 0.0 36.33106 6 AGGGCGA 2170 0.0 36.294933 6 ACGGGAT 1285 0.0 35.95331 5 GGGCGAT 4480 0.0 35.94643 7 TCGATAG 80 0.0 35.75 1 GCGGGAC 1010 0.0 35.72277 5 >>END_MODULE