##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547163_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3064207 Sequences flagged as poor quality 0 Sequence length 50 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.693707050470156 31.0 30.0 31.0 28.0 34.0 2 31.04027861042025 31.0 31.0 33.0 28.0 34.0 3 31.127659782775773 31.0 31.0 34.0 28.0 34.0 4 34.98907776139145 35.0 35.0 37.0 32.0 37.0 5 34.82717747201804 35.0 35.0 37.0 32.0 37.0 6 34.87071010542042 35.0 35.0 37.0 32.0 37.0 7 35.49445549860045 36.0 35.0 37.0 35.0 37.0 8 34.45676679153856 37.0 35.0 37.0 33.0 37.0 9 36.59720834786945 39.0 37.0 39.0 32.0 39.0 10 36.07900119019374 38.0 35.0 39.0 31.0 39.0 11 35.83533031547803 37.0 35.0 39.0 30.0 39.0 12 35.70982835036928 37.0 35.0 39.0 30.0 39.0 13 35.68213635697588 37.0 35.0 39.0 30.0 39.0 14 36.663786421739786 38.0 35.0 40.0 31.0 41.0 15 36.76609706850745 38.0 35.0 40.0 31.0 41.0 16 36.76741714903726 38.0 35.0 40.0 31.0 41.0 17 36.675222659565755 38.0 35.0 40.0 31.0 41.0 18 36.48778591002501 38.0 35.0 40.0 30.0 41.0 19 36.340734813281216 38.0 35.0 40.0 30.0 41.0 20 36.10663052463492 38.0 34.0 40.0 30.0 41.0 21 35.96746564445548 38.0 34.0 40.0 30.0 41.0 22 35.924487477510496 37.0 34.0 40.0 30.0 41.0 23 35.79185055056659 37.0 34.0 40.0 30.0 41.0 24 35.67027782391986 37.0 34.0 40.0 29.0 41.0 25 35.490584676557425 37.0 34.0 40.0 29.0 41.0 26 35.35085194962351 37.0 34.0 40.0 28.0 41.0 27 35.16521925574872 37.0 34.0 40.0 27.0 41.0 28 35.161816744103774 37.0 34.0 40.0 27.0 41.0 29 35.001264274900485 37.0 33.0 40.0 27.0 41.0 30 34.91732118619924 37.0 33.0 40.0 26.0 41.0 31 34.75413181942343 37.0 33.0 40.0 25.0 41.0 32 34.311377462423394 37.0 33.0 40.0 23.0 41.0 33 33.89469281938198 37.0 33.0 40.0 21.0 41.0 34 33.552461697267844 37.0 32.0 40.0 18.0 41.0 35 33.20775391479753 37.0 32.0 40.0 18.0 41.0 36 33.094904815503654 37.0 31.0 40.0 16.0 41.0 37 33.06003249780449 37.0 31.0 40.0 15.0 41.0 38 33.04325034176868 37.0 31.0 40.0 15.0 41.0 39 32.92294417446341 37.0 31.0 40.0 15.0 41.0 40 32.857443704031745 37.0 31.0 40.0 15.0 41.0 41 32.8552744641599 37.0 31.0 40.0 15.0 41.0 42 32.704758523167655 36.0 31.0 40.0 14.0 41.0 43 32.74214046244265 36.0 31.0 40.0 14.0 41.0 44 32.45202690288222 36.0 30.0 40.0 12.0 41.0 45 32.403726967531895 36.0 30.0 40.0 12.0 41.0 46 32.360688752424366 36.0 30.0 40.0 12.0 41.0 47 32.30777946790148 36.0 30.0 40.0 12.0 41.0 48 32.28608804822912 36.0 30.0 40.0 12.0 41.0 49 32.29342175642834 36.0 30.0 40.0 12.0 41.0 50 31.766974620187213 35.0 29.0 39.0 10.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 2.0 12 7.0 13 14.0 14 57.0 15 139.0 16 492.0 17 1260.0 18 3110.0 19 6016.0 20 9984.0 21 15178.0 22 22127.0 23 31653.0 24 44590.0 25 62758.0 26 86131.0 27 98530.0 28 99049.0 29 100274.0 30 109522.0 31 127360.0 32 150682.0 33 182041.0 34 236870.0 35 273536.0 36 274264.0 37 322879.0 38 395570.0 39 410110.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.843284086225246 22.60438018710877 25.72489391219327 21.827441814472717 2 36.89662610913688 23.97915676062355 26.41854809417249 12.70566903606708 3 26.133580401062982 23.930465533170572 37.184041417567414 12.75191264819903 4 22.771894979679896 26.643304450384715 36.86882119909001 13.715979370845377 5 20.49182708609438 30.56954050428055 35.87548099720417 13.063151412420899 6 19.141102412467564 38.48196287000193 33.192046098713305 9.184888618817201 7 82.35997111161224 2.7061487686700016 13.852686845242504 1.0811932744752557 8 80.71132270110995 4.948001228376542 13.171564453706946 1.169111616806567 9 77.59619372973171 5.1786971311011305 15.039062308780052 2.1860468303871117 10 33.18424636455696 35.509611459016966 20.966631823502784 10.339510352923286 11 23.910068738828677 24.210962248960335 36.328159292110485 15.550809720100503 12 23.768433398918546 22.7047324152709 36.7291439514367 16.797690234373853 13 20.800618234995223 25.56730012039004 37.30684643694111 16.325235207673632 14 18.44245509523345 28.19982462020353 36.402012005063625 16.955708279499394 15 17.973589904337402 24.87504923786154 40.85086288230528 16.30049797549578 16 20.576840924911405 23.742390771902812 39.458300304124364 16.222467999061422 17 20.415396218336422 23.10894792682087 35.99104107522762 20.484614779615086 18 21.262140579928186 23.298850240861665 37.49762989249747 17.94137928671268 19 23.125200092552493 24.37191743247111 34.832307347382205 17.670575127594187 20 24.343655634230977 24.45432048161237 34.21766218796576 16.98436169619089 21 22.644357904018886 24.837714945498135 35.796341435157615 16.721585715325368 22 22.00272370632924 23.142561843896317 35.56678775291617 19.287926696858275 23 19.343471247210125 26.40888817237217 35.724512084203184 18.523128496214518 24 19.12902751021716 24.63955600910774 38.19604876563496 18.03536771504014 25 19.23071776808812 25.92817652332235 36.564794741347434 18.276310967242097 26 19.25333373365442 27.382092658883682 34.73704615908781 18.62752744837408 27 18.699878957263657 26.361991862821277 36.22637112962669 18.711758050288378 28 18.205297488061348 26.17499405229477 38.00506950085291 17.61463895879097 29 19.20829761174751 24.820092115186736 37.592336287985766 18.379273985079987 30 19.776307540580646 25.213146500872817 36.67931050350058 18.331235455045956 31 21.530888742177012 25.594028079695658 34.76276243739408 18.11232074073325 32 21.985492494469206 25.70407286452906 34.51842515861363 17.792009482388103 33 21.64899434013433 26.315813520431224 33.35574261138363 18.679449528050814 34 19.807147493625592 27.230634222818495 33.65862684864306 19.30359143491285 35 19.850682411468938 27.681843948532197 33.16851635676049 19.298957283238373 36 22.00252789710356 28.156877130037234 30.86883490573581 18.9717600671234 37 20.806623051249478 29.486780755999842 30.950650527200025 18.755945665550662 38 20.87779970478496 29.575743414201455 30.210850637701697 19.335606243311894 39 20.73567484181062 28.821518911744537 30.3912562042969 20.051550042147937 40 21.63678889840014 27.600485215261237 30.637257861495648 20.12546802484297 41 19.80972564843041 27.690720633429788 30.690974859074466 21.80857885906533 42 20.804958672831177 28.35160940497819 29.696329262350744 21.147102659839888 43 20.8745688525612 27.74026036752739 30.470199957117778 20.91497082279363 44 20.434095999389076 28.431989092120734 31.207030073359928 19.926884835130263 45 19.88684184847825 29.27064000571763 30.460996923510713 20.381521222293404 46 20.60947579585844 29.235459614836728 30.209120989541503 19.945943599763332 47 20.466567695981375 28.32964613683083 30.766230871478328 20.437555295709462 48 20.72467689030147 27.40350113422494 31.722758938935915 20.149063036537676 49 20.949726960352223 26.89596362125666 31.89973784408168 20.254571574309438 50 19.709047071558807 28.672377551516593 31.336459971535866 20.282115405388733 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1680.0 1 2754.5 2 3829.0 3 40712.0 4 77595.0 5 58499.0 6 39403.0 7 39310.0 8 39217.0 9 39373.5 10 39530.0 11 38902.0 12 38274.0 13 37035.5 14 35797.0 15 33867.5 16 31938.0 17 30148.5 18 28359.0 19 26763.0 20 25167.0 21 24583.0 22 23999.0 23 25843.0 24 27687.0 25 30884.5 26 34082.0 27 38575.0 28 43068.0 29 51939.5 30 60811.0 31 69628.0 32 78445.0 33 87980.0 34 97515.0 35 108410.0 36 119305.0 37 131361.5 38 143418.0 39 154346.0 40 165274.0 41 178640.0 42 192006.0 43 206622.0 44 221238.0 45 222035.0 46 222832.0 47 222063.0 48 221294.0 49 208940.0 50 196586.0 51 186749.0 52 176912.0 53 165167.5 54 153423.0 55 140954.5 56 128486.0 57 118063.5 58 107641.0 59 97800.5 60 87960.0 61 78355.0 62 68750.0 63 58406.0 64 48062.0 65 39578.0 66 31094.0 67 25193.5 68 19293.0 69 16577.5 70 13862.0 71 11045.5 72 8229.0 73 6841.5 74 5454.0 75 4276.5 76 3099.0 77 2338.0 78 1577.0 79 1302.5 80 1028.0 81 823.0 82 618.0 83 429.5 84 241.0 85 161.0 86 81.0 87 55.0 88 29.0 89 21.0 90 13.0 91 7.5 92 2.0 93 2.0 94 2.0 95 1.5 96 1.0 97 0.5 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 3064207.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.665183409570982 #Duplication Level Percentage of deduplicated Percentage of total 1 77.67261108104721 21.48827031457446 2 5.606051493956456 3.1018488556760953 3 2.424301767872546 2.0120625914502344 4 1.580373660526406 1.7488530869647239 5 1.1468338855028029 1.5863684891372984 6 0.8829832652575493 1.465673638855918 7 0.7678051148796076 1.4869028528165744 8 0.6541634542535506 1.4478041553410381 9 0.5970953489085735 1.4866877106501717 >10 8.038205783358512 50.480564500125894 >50 0.5837787066320539 10.059656260751728 >100 0.044112100542087175 1.9323686480060072 >500 0.0012030980447463775 0.2013011969528539 >1k 3.6092941342366955E-4 0.12960761589516545 >5k 0.0 0.0 >10k+ 1.203098044745565E-4 1.3720300828018772 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 41222 1.3452746501786597 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.018340797472233435 0.0 2 0.0 0.0 0.0 0.061712540960842395 0.0 3 0.0 0.0 0.0 0.11882356511815292 0.0 4 0.0 0.0 0.0 0.1638923218960077 0.0 5 0.0 0.0 0.0 0.24378248597434835 0.0 6 0.0 0.0 0.0 0.45848730193488885 0.0 7 0.0 0.0 0.0 0.5885698975297687 0.0 8 0.0 0.0 0.0 0.888973884597222 0.0 9 0.0 0.0 0.0 1.0621997795840816 0.0 10 0.0 0.0 0.0 1.278536339091974 0.0 11 0.0 0.0 0.0 1.4072156352361311 0.0 12 0.0 0.0 0.0 1.5380488328627928 0.0 13 0.0 0.0 0.0 1.6252165731623223 0.0 14 0.0 0.0 0.0 1.676877573871478 0.0 15 0.0 0.0 0.0 1.7167900210397014 0.0 16 0.0 0.0 0.0 1.7733136175199653 0.0 17 0.0 0.0 0.0 1.8356788558997483 0.0 18 0.0 0.0 0.0 1.9435697392506446 0.0 19 0.0 0.0 0.0 1.9941864240894953 0.0 20 0.0 0.0 0.0 2.0500899580217653 0.0 21 0.0 0.0 0.0 2.107951584210858 0.0 22 0.0 0.0 0.0 2.1728949773954565 0.0 23 0.0 0.0 0.0 2.245964453445867 0.0 24 0.0 0.0 0.0 2.3092108333412202 0.0 25 0.0 0.0 0.0 2.3698464235608103 0.0 26 0.0 0.0 0.0 2.4306125532641887 3.2634870947034585E-5 27 0.0 0.0 0.0 2.499504765833379 3.2634870947034585E-5 28 0.0 0.0 0.0 2.572476337270948 3.2634870947034585E-5 29 0.0 0.0 0.0 2.649005109641744 3.2634870947034585E-5 30 0.0 0.0 0.0 2.7443968374199263 3.2634870947034585E-5 31 0.0 0.0 0.0 2.8268977911740296 3.2634870947034585E-5 32 0.0 0.0 0.0 2.9153709263114402 3.2634870947034585E-5 33 0.0 0.0 0.0 3.00253866661097 3.2634870947034585E-5 34 0.0 0.0 0.0 3.0907507227808044 3.2634870947034585E-5 35 0.0 0.0 0.0 3.189536477137478 3.2634870947034585E-5 36 0.0 0.0 0.0 3.286951566914376 3.2634870947034585E-5 37 0.0 0.0 0.0 3.385084623852109 3.2634870947034585E-5 38 0.0 0.0 0.0 3.4912784939137596 3.2634870947034585E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 35720 0.0 43.057667 1 GCGTAAG 255 0.0 39.686275 1 TACGGGA 1265 0.0 38.260868 4 GTTTTTT 39760 0.0 38.129272 2 ACGGGAT 1635 0.0 37.27217 5 GCGATAA 385 0.0 37.142857 9 AGGGCGA 3205 0.0 36.861153 6 TAACGGG 705 0.0 36.822693 3 AGGGATC 4065 0.0 36.53137 6 AAGGGAT 5875 0.0 36.36085 5 TAGGGAC 3285 0.0 36.164383 5 GGGCGAT 6445 0.0 35.910007 7 TAGGGAT 5570 0.0 35.78456 5 CGGGATC 950 0.0 35.663155 6 CGACGGT 260 0.0 35.538464 28 TTCGTAG 230 0.0 35.391304 1 ATAGGGC 1290 0.0 35.302326 4 CCGTACA 25 0.0023533546 35.2 43 GTAGGGA 4130 0.0 35.157383 4 TAGGGCG 1285 0.0 35.09728 5 >>END_MODULE