##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547158_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1658826 Sequences flagged as poor quality 0 Sequence length 50 %GC 46 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.47936733569404 31.0 31.0 33.0 30.0 34.0 2 31.860574888505486 31.0 31.0 34.0 30.0 34.0 3 32.03404154504451 33.0 31.0 34.0 30.0 34.0 4 35.727559732003236 37.0 35.0 37.0 35.0 37.0 5 35.6254061607426 37.0 35.0 37.0 33.0 37.0 6 35.679646931022305 37.0 35.0 37.0 33.0 37.0 7 35.97557429169786 37.0 35.0 37.0 35.0 37.0 8 22.00615736671598 35.0 0.0 37.0 0.0 37.0 9 29.930561131788384 37.0 18.0 39.0 17.0 39.0 10 34.317522151208145 35.0 32.0 39.0 27.0 39.0 11 35.93817434739991 37.0 35.0 39.0 32.0 39.0 12 36.35207490116504 37.0 35.0 39.0 32.0 39.0 13 36.444330508443926 39.0 35.0 39.0 32.0 39.0 14 37.56459568393551 39.0 36.0 41.0 33.0 41.0 15 37.822880760248516 40.0 36.0 41.0 33.0 41.0 16 37.89595171524922 40.0 36.0 41.0 33.0 41.0 17 37.8410924352524 40.0 36.0 41.0 33.0 41.0 18 37.82898507739811 40.0 36.0 41.0 33.0 41.0 19 37.85069259825925 40.0 36.0 41.0 33.0 41.0 20 37.76479208789831 40.0 36.0 41.0 33.0 41.0 21 37.66619042624121 40.0 35.0 41.0 33.0 41.0 22 37.61904081561297 39.0 35.0 41.0 33.0 41.0 23 37.5185191213545 39.0 35.0 41.0 33.0 41.0 24 37.43140751350654 39.0 35.0 41.0 32.0 41.0 25 37.300015191466734 39.0 35.0 41.0 32.0 41.0 26 37.240508648887825 39.0 35.0 41.0 32.0 41.0 27 37.144727053952614 39.0 35.0 41.0 32.0 41.0 28 37.157627141122695 39.0 35.0 41.0 32.0 41.0 29 37.077184104903104 39.0 35.0 41.0 32.0 41.0 30 36.99759408159747 39.0 35.0 41.0 31.0 41.0 31 36.9640522875817 39.0 35.0 41.0 31.0 41.0 32 36.827003555526616 39.0 35.0 41.0 31.0 41.0 33 36.76521347024944 39.0 35.0 41.0 31.0 41.0 34 36.7349619550212 39.0 35.0 41.0 31.0 41.0 35 36.617305853657946 39.0 35.0 41.0 31.0 41.0 36 36.518509475978796 39.0 35.0 41.0 30.0 41.0 37 36.485252220546336 39.0 35.0 41.0 30.0 41.0 38 36.415408246555096 39.0 35.0 41.0 30.0 41.0 39 36.34407225350941 39.0 35.0 41.0 30.0 41.0 40 36.25675688709967 39.0 35.0 40.0 30.0 41.0 41 36.256497667627585 39.0 35.0 40.0 30.0 41.0 42 36.03096889004633 38.0 35.0 40.0 29.0 41.0 43 36.06766050206592 38.0 35.0 40.0 30.0 41.0 44 35.885193504321734 38.0 35.0 40.0 29.0 41.0 45 35.68673447365788 38.0 35.0 40.0 28.0 41.0 46 35.75351362951871 38.0 35.0 40.0 29.0 41.0 47 35.60406697266621 38.0 34.0 40.0 28.0 41.0 48 35.62408594994291 38.0 34.0 40.0 28.0 41.0 49 35.53523817446797 38.0 34.0 40.0 28.0 41.0 50 35.083061152887645 37.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 2.0 11 5.0 12 4.0 13 4.0 14 13.0 15 32.0 16 74.0 17 178.0 18 390.0 19 810.0 20 1455.0 21 2421.0 22 3943.0 23 5807.0 24 8436.0 25 12317.0 26 16547.0 27 20918.0 28 24507.0 29 29513.0 30 37612.0 31 48413.0 32 62996.0 33 83922.0 34 130828.0 35 192862.0 36 164920.0 37 246242.0 38 285368.0 39 278286.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.85276575119995 23.25686961742823 28.72579764242904 12.164566988942783 2 30.374493768484456 25.624327084335548 29.80601943784339 14.195159709336602 3 30.53062828771673 25.881316063288136 29.691902586528062 13.89615306246707 4 27.07185684333378 28.456691660246463 28.843531509633923 15.627919986785836 5 24.053577650699953 32.56097987371792 27.826125223501442 15.559317252080687 6 21.594247980198045 42.36502200954169 25.228384411626052 10.812345598634215 7 88.89455554711586 4.157458347047852 5.131339875309406 1.816646230526891 8 55.10023353865927 40.40375542703092 2.910311268330735 1.585699765979072 9 85.47273794840447 5.023733652595269 6.555781016212671 2.9477473827875857 10 45.551914426226745 27.23209064724088 13.670692405351737 13.545302521180641 11 37.518461851936244 25.55198676654453 21.23495773516933 15.694593646349889 12 35.85083667605885 22.77966465440016 24.50757342843674 16.86192524110425 13 23.528808928724292 33.221507258748055 25.074118683936714 18.175565128590943 14 18.2550791945629 35.67167382232977 26.90053085736539 19.17271612574194 15 17.350885505773363 27.061126362861444 38.53092488301968 17.057063248345518 16 20.306952025106913 22.482225381082767 37.690390673886235 19.520431919924093 17 20.210317417257748 23.33969928129894 27.76722814809992 28.682755153343386 18 23.213766844744416 25.796979309463442 29.589963022040887 21.399290823751254 19 27.053832047484182 27.765721058145942 24.99472518516107 20.1857217092088 20 30.320961933319108 24.82140984045343 25.163579543604936 19.69404868262253 21 25.05151233462702 27.643104219490173 26.422843625552044 20.882539820330763 22 24.131403775923456 25.141515746678678 26.018039263913153 24.709041213484717 23 22.60984575838575 29.026431946448874 25.67659296393956 22.68712933122582 24 22.536058634238916 25.45493017350825 32.527884178328534 19.481127013924304 25 21.292649138607665 26.590854013621684 29.765207441889626 22.35128940588103 26 20.400331318655482 31.67059112890683 26.4747478035671 21.454329748870588 27 21.067851601072082 31.341020697770595 26.926814506162795 20.664313194994534 28 18.611415543281815 29.51213689681739 32.24648034212147 19.62996721777932 29 19.92180011646791 26.29630835301593 32.06695578680343 21.714935743712722 30 21.80252781183801 27.759632414731865 29.445945506038605 20.991894267391515 31 26.01641160676286 27.680540333947018 24.698853285395817 21.60419477389431 32 27.178799946468164 27.20713323760298 25.68189792057757 19.93216889535129 33 25.98837973361884 28.686191318438464 24.68149160912597 20.643937338816727 34 21.65061314447688 27.930777549905777 27.55551215136488 22.863097154252465 35 21.608294058569133 27.224193495882027 28.23563170579675 22.93188073975209 36 26.85543872594232 27.459540663095467 26.09930155423173 19.585719056730483 37 22.400842523567874 30.70888688747343 27.370742923006997 19.519527665951703 38 21.51804951212484 30.46708937525696 25.045363407614786 22.96949770500342 39 22.950689222377754 28.765403966419623 26.51821227783987 21.76569453336275 40 23.69000727020194 26.336818930978893 26.90927197909847 23.063901819720694 41 19.72780749759167 26.201120551522582 28.166185000717377 25.904886950168372 42 23.137447809474892 27.215452374148946 25.062122247903034 24.584977568473125 43 23.25536252747425 27.546107910052047 25.24351559476401 23.955013967709693 44 21.61866283745251 29.82386338289851 26.219446765362974 22.33802701428601 45 21.200776935013074 31.455499250674873 23.9310813792405 23.41264243507155 46 22.913072257126426 30.46208583660975 25.378912556229526 21.245929350034302 47 22.77604763851061 27.40920385863255 27.370441505016196 22.44430699784064 48 23.87272685622241 24.698973852592136 28.568095749644627 22.860203541540823 49 21.894279448236283 25.69684825292104 29.11010558069382 23.29876671814886 50 20.368742713220072 29.120353792380875 27.893220868252605 22.617682626146443 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 530.0 1 1230.0 2 1930.0 3 4921.5 4 7913.0 5 6119.5 6 4326.0 7 4468.0 8 4610.0 9 4830.0 10 5050.0 11 5120.5 12 5191.0 13 5099.5 14 5008.0 15 4850.5 16 4693.0 17 4629.0 18 4565.0 19 4660.5 20 4756.0 21 5336.0 22 5916.0 23 7357.0 24 8798.0 25 11102.5 26 13407.0 27 16118.5 28 18830.0 29 22922.0 30 27014.0 31 30994.5 32 34975.0 33 39720.5 34 44466.0 35 48507.0 36 52548.0 37 58649.0 38 64750.0 39 77508.0 40 90266.0 41 104384.0 42 118502.0 43 127702.5 44 136903.0 45 137852.0 46 138801.0 47 137285.5 48 135770.0 49 135429.5 50 135089.0 51 127906.5 52 120724.0 53 110822.5 54 100921.0 55 93298.0 56 85675.0 57 79240.0 58 72805.0 59 68803.5 60 64802.0 61 58547.5 62 52293.0 63 42649.5 64 33006.0 65 26468.0 66 19930.0 67 16439.5 68 12949.0 69 10771.5 70 8594.0 71 7044.0 72 5494.0 73 4404.5 74 3315.0 75 2659.5 76 2004.0 77 1525.0 78 1046.0 79 713.5 80 381.0 81 280.0 82 179.0 83 109.5 84 40.0 85 34.0 86 28.0 87 25.5 88 23.0 89 14.5 90 6.0 91 4.0 92 2.0 93 1.5 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1658826.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.697482189881264 #Duplication Level Percentage of deduplicated Percentage of total 1 77.54277008330799 16.049401027533246 2 5.916281563494316 2.449042645814929 3 1.997724274702527 1.2404358778784703 4 1.1547636730524997 0.9560280222610393 5 0.7912152729464096 0.8188082010085177 6 0.6155730071774916 0.7644486811576671 7 0.5117737615727096 0.7414699820779788 8 0.4610895664514 0.7634714471654339 9 0.40675255963697643 0.7576878472897443 >10 8.667320243996043 46.731774460424994 >50 1.813705987711082 24.504803080791714 >100 0.1177907600509018 3.5460914530201912 >500 0.0023558151998050855 0.3068187959623345 >1k 8.834306999269071E-4 0.3697184776137309 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2459 0.14823736787342373 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 2106 0.12695725772323319 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.034482218147050984 0.0 2 0.0 0.0 0.0 0.12056719631836009 0.0 3 0.0 0.0 0.0 0.1668047161064512 0.0 4 0.0 0.0 0.0 0.2734464012500407 0.0 5 0.0 0.0 0.0 0.45327237455887476 0.0 6 0.0 0.0 0.0 0.6637826993307315 0.0 7 0.0 0.0 0.0 0.7657825474160641 0.0 8 0.0 0.0 0.0 1.0590622524604751 0.0 9 0.0 0.0 0.0 1.206998202343103 0.0 10 0.0 0.0 0.0 1.5084161931390032 0.0 11 0.0 0.0 0.0 1.8444972528764318 0.0 12 0.0 0.0 0.0 2.1141457874424443 0.0 13 6.028359815918004E-5 0.0 0.0 2.221872577352899 0.0 14 6.028359815918004E-5 0.0 0.0 2.2622023045213906 0.0 15 6.028359815918004E-5 0.0 0.0 2.3349646074995207 0.0 16 6.028359815918004E-5 0.0 0.0 2.5038792495415434 0.0 17 6.028359815918004E-5 0.0 0.0 2.6982335700067397 0.0 18 6.028359815918004E-5 0.0 0.0 2.97318706121076 0.0 19 6.028359815918004E-5 0.0 0.0 3.097793258605785 0.0 20 6.028359815918004E-5 0.0 0.0 3.227704412638818 0.0 21 6.028359815918004E-5 0.0 0.0 3.414824701324913 0.0 22 6.028359815918004E-5 0.0 0.0 3.6026081095907587 0.0 23 6.028359815918004E-5 0.0 0.0 3.809561702071224 0.0 24 6.028359815918004E-5 0.0 0.0 3.9658167884998186 0.0 25 6.028359815918004E-5 0.0 0.0 4.094944255756782 0.0 26 6.028359815918004E-5 0.0 0.0 4.224132006611905 0.0 27 6.028359815918004E-5 0.0 0.0 4.348135368025338 0.0 28 6.028359815918004E-5 0.0 0.0 4.487269912576726 0.0 29 6.028359815918004E-5 0.0 0.0 4.625500203155726 0.0 30 6.028359815918004E-5 0.0 0.0 4.7999006526302335 0.0 31 6.028359815918004E-5 0.0 0.0 4.968875578270415 0.0 32 6.028359815918004E-5 0.0 0.0 5.119885991659161 0.0 33 6.028359815918004E-5 0.0 0.0 5.271499241029499 0.0 34 6.028359815918004E-5 0.0 0.0 5.430768507366053 0.0 35 6.028359815918004E-5 0.0 0.0 5.622651200306723 0.0 36 6.028359815918004E-5 0.0 0.0 5.793314066695362 0.0 37 6.028359815918004E-5 0.0 0.0 5.970366994488874 0.0 38 6.028359815918004E-5 0.0 0.0 6.14850502704925 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGATAG 60 0.0 44.0 1 ACGCTTA 25 4.4436973E-5 44.0 26 CGTACCG 25 4.4436973E-5 44.0 12 CGCTTAA 25 4.4436973E-5 44.0 27 TCACGTA 20 7.8574935E-4 44.0 12 TGCGTAG 105 0.0 41.904762 1 TACGGGT 100 0.0 41.8 4 CGTAAGA 85 0.0 41.411766 2 TATAGCG 85 0.0 41.411766 1 CTTGCGA 60 3.6379788E-12 40.333332 2 GAGCGAT 995 0.0 40.020103 7 CGTTAGA 105 0.0 39.809525 2 CGTTTTT 3040 0.0 39.730267 1 TACACGG 85 0.0 38.823532 2 TATGCGA 120 0.0 38.5 2 ATCGTAG 80 0.0 38.5 1 CTATGCG 145 0.0 37.931038 1 TTAGCGA 215 0.0 37.860466 2 TAGAACG 105 0.0 37.714287 1 ATTACCG 70 0.0 37.714287 1 >>END_MODULE