##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547157_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1560221 Sequences flagged as poor quality 0 Sequence length 50 %GC 46 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.519871864306403 31.0 31.0 33.0 30.0 34.0 2 31.908352086018585 31.0 31.0 34.0 30.0 34.0 3 32.061020842560126 33.0 31.0 34.0 30.0 34.0 4 35.745482851467834 37.0 35.0 37.0 35.0 37.0 5 35.6411040487213 37.0 35.0 37.0 33.0 37.0 6 35.68485105635676 37.0 35.0 37.0 33.0 37.0 7 36.021727691141194 37.0 35.0 37.0 35.0 37.0 8 22.067916660524375 35.0 0.0 37.0 0.0 37.0 9 29.991487103429577 37.0 18.0 39.0 17.0 39.0 10 34.458781159848506 35.0 32.0 39.0 27.0 39.0 11 35.968653799686074 37.0 35.0 39.0 32.0 39.0 12 36.18731513035653 37.0 35.0 39.0 32.0 39.0 13 36.16704364317619 38.0 35.0 39.0 32.0 39.0 14 37.254620339041715 39.0 35.0 41.0 32.0 41.0 15 37.58650216860304 39.0 35.0 41.0 33.0 41.0 16 37.691796226303836 39.0 35.0 41.0 33.0 41.0 17 37.66066409822711 39.0 35.0 41.0 33.0 41.0 18 37.60958159132584 39.0 36.0 41.0 33.0 41.0 19 37.64442216839794 39.0 36.0 41.0 33.0 41.0 20 37.56281513965009 39.0 35.0 41.0 33.0 41.0 21 37.411835887351856 39.0 35.0 41.0 33.0 41.0 22 37.388161677095745 39.0 35.0 41.0 33.0 41.0 23 37.291576642026996 39.0 35.0 41.0 32.0 41.0 24 37.217280116086116 39.0 35.0 41.0 32.0 41.0 25 37.09003339911461 39.0 35.0 41.0 32.0 41.0 26 37.0258174963675 39.0 35.0 41.0 32.0 41.0 27 36.89045782616694 39.0 35.0 41.0 32.0 41.0 28 36.95458015242713 39.0 35.0 41.0 32.0 41.0 29 36.89993981621834 39.0 35.0 41.0 32.0 41.0 30 36.82220916139444 38.0 35.0 40.0 31.0 41.0 31 36.75202038685545 38.0 35.0 40.0 31.0 41.0 32 36.576649077278155 38.0 35.0 41.0 31.0 41.0 33 36.52129986713421 38.0 35.0 41.0 31.0 41.0 34 36.485849761027445 39.0 35.0 41.0 31.0 41.0 35 36.37974812542582 38.0 35.0 41.0 30.0 41.0 36 36.2444365253384 38.0 35.0 41.0 30.0 41.0 37 36.18597557653691 38.0 35.0 40.0 30.0 41.0 38 36.12348827505847 38.0 35.0 40.0 30.0 41.0 39 36.06534394806889 38.0 35.0 40.0 30.0 41.0 40 35.99966479107768 38.0 35.0 40.0 30.0 41.0 41 36.029654773266095 38.0 35.0 40.0 30.0 41.0 42 35.79101422170321 38.0 35.0 40.0 29.0 41.0 43 35.83104380725551 38.0 35.0 40.0 30.0 41.0 44 35.6368905430705 38.0 35.0 40.0 29.0 41.0 45 35.45032210180481 38.0 34.0 40.0 28.0 41.0 46 35.52745540535604 38.0 34.0 40.0 29.0 41.0 47 35.389740299611404 38.0 34.0 40.0 28.0 41.0 48 35.44552342264333 38.0 34.0 40.0 28.0 41.0 49 35.38164144694886 37.0 34.0 40.0 28.0 41.0 50 34.89027900534604 37.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 2.0 13 5.0 14 10.0 15 33.0 16 63.0 17 148.0 18 414.0 19 881.0 20 1596.0 21 2689.0 22 4232.0 23 6112.0 24 9025.0 25 12628.0 26 16873.0 27 20625.0 28 24103.0 29 28992.0 30 35902.0 31 46245.0 32 59487.0 33 80586.0 34 131689.0 35 215251.0 36 145316.0 37 219018.0 38 260828.0 39 237467.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.80513337533593 23.59454205526012 29.591512997197196 12.008811572206758 2 29.569016184245694 25.906970871434236 30.457736436056177 14.066276508263895 3 29.29982355063802 25.730521509452824 31.304924110110044 13.664730829799113 4 25.953310460505275 28.35649565029569 30.77256363040877 14.91763025879026 5 23.618320737895466 32.56833487050873 28.772590549672127 15.040753841923676 6 21.4203628844888 41.60865672234895 25.90947051731774 11.061509875844513 7 89.36855740308584 3.9405955951112057 5.122094882712128 1.5687521190908211 8 55.68864923622999 39.91633236573537 2.881707142770159 1.5133112552644785 9 86.48768347561018 4.705166768041194 6.3110290144793595 2.4961207418692606 10 52.997748395900324 26.543867823853155 10.041910729313347 10.416473050933169 11 42.50058164836904 20.606311541762352 22.045658916268913 14.84744789359969 12 39.44063052606009 22.700758418198447 22.905152539287705 14.953458516453757 13 21.304225491132346 40.088807931696856 24.306428384184038 14.300538192986762 14 15.244122467265855 42.15563051644607 27.22793758063761 15.372309435650463 15 14.896607595975187 23.86943900896091 46.457200614528325 14.77675278053558 16 17.011179826447666 20.552152547619855 44.5562519668688 17.880415659063683 17 18.478215586125298 20.523182292764936 26.90650875741321 34.09209336369655 18 21.951056933601073 23.945069320307827 32.695880904051414 21.407992842039686 19 28.283813639221624 26.37914756947894 24.450574630132525 20.886464161166913 20 30.53599458025498 24.861221583352613 24.33462951722865 20.26815431916376 21 23.246834903516874 28.226770438290472 27.548276814630746 20.978117843561904 22 23.312594818298177 24.451856499816373 26.02746662171577 26.20808206016968 23 20.52722018226905 31.187953501459088 24.401030366851874 23.883795949419987 24 20.79436182438257 24.988831710379493 35.6805862759186 18.536220189319334 25 17.837665305107418 26.796972992928563 32.94892197964263 22.41643972232139 26 17.91086006405503 34.66951156278502 26.247627739916336 21.172000633243623 27 20.00748611895366 32.86726688078163 28.00577610479541 19.119470895469295 28 16.240712052971983 29.322320363589515 36.33562168436394 18.101345899074552 29 17.018294203193012 25.15130869280698 36.32607175521929 21.504325348780718 30 19.215226560852596 29.806162075757214 31.018105768349486 19.960505595040704 31 28.694011938052366 26.654364990600694 23.787014788289607 20.864608283057336 32 28.8861001101767 27.708510525111507 24.361676967557802 19.043712397153993 33 26.16584445408695 27.69242306057924 24.888974062007883 21.252758423325925 34 19.99370601985232 28.44334232137627 28.23914048073959 23.323811178031832 35 19.909743555560397 26.335243532807212 30.083430488373118 23.67158242325927 36 29.530624187214507 24.630549133744513 27.12628531470862 18.71254136433236 37 21.757622798308702 29.277390831170713 28.925261229018197 20.03972514150239 38 20.876273297180337 32.56064365240565 23.5264106815637 23.03667236885031 39 21.46221592966637 30.373709878280064 27.275815413329262 20.888258778724296 40 24.15657781814243 25.905560814782007 25.172908196979787 24.764953170095776 41 18.530131308321067 24.08370352661578 27.339203869195455 30.046961295867703 42 23.515642976219393 26.210068958179644 24.41481046595322 25.85947759964774 43 23.220107920608683 27.201402878182 25.310901468445817 24.2675877327635 44 20.61124674004516 30.78903565584619 27.19358347311054 21.406134130998108 45 19.176578189884637 33.847256254081955 23.340539577406023 23.635625978627388 46 23.066347652031347 31.17436568281032 25.3076967942362 20.45158987092213 47 21.90401231620392 27.03354204308236 27.541418811822172 23.521026828891547 48 24.430513369580336 23.060707425422425 29.65265818111665 22.85612102388059 49 22.378432286195356 23.036223714460967 30.604510514856546 23.980833484487132 50 19.526656800542998 31.121680838804245 27.156729719699968 22.19493264095279 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 824.0 1 1235.5 2 1647.0 3 4336.0 4 7025.0 5 5311.5 6 3598.0 7 3984.0 8 4370.0 9 4821.5 10 5273.0 11 5596.0 12 5919.0 13 5686.5 14 5454.0 15 5310.5 16 5167.0 17 5066.0 18 4965.0 19 4945.0 20 4925.0 21 5258.0 22 5591.0 23 6800.5 24 8010.0 25 9482.0 26 10954.0 27 12270.0 28 13586.0 29 16715.5 30 19845.0 31 23695.5 32 27546.0 33 32044.0 34 36542.0 35 39648.0 36 42754.0 37 49493.5 38 56233.0 39 75059.0 40 93885.0 41 113989.5 42 134094.0 43 145150.0 44 156206.0 45 153774.5 46 151343.0 47 145153.5 48 138964.0 49 137323.0 50 135682.0 51 129577.0 52 123472.0 53 108618.5 54 93765.0 55 82315.0 56 70865.0 57 64039.5 58 57214.0 59 51789.0 60 46364.0 61 39584.5 62 32805.0 63 27783.0 64 22761.0 65 18302.5 66 13844.0 67 10369.0 68 6894.0 69 5774.0 70 4654.0 71 3837.5 72 3021.0 73 2510.5 74 2000.0 75 1643.5 76 1287.0 77 910.0 78 533.0 79 370.5 80 208.0 81 140.0 82 72.0 83 48.0 84 24.0 85 19.5 86 15.0 87 15.0 88 15.0 89 9.0 90 3.0 91 2.0 92 1.0 93 1.0 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1560221.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.669671475581136 #Duplication Level Percentage of deduplicated Percentage of total 1 80.17805039547363 15.770759108315549 2 6.470447396872441 2.5454314919302012 3 1.947950987549197 1.1494666792687964 4 0.9776931816225396 0.7692361474572414 5 0.6498761487390563 0.6391425172756571 6 0.48900991815453665 0.5771198663040334 7 0.3785127685306987 0.5211655264418071 8 0.30095257513308554 0.4735710626078354 9 0.2731292483964705 0.48351263276978745 >10 5.1747544212849235 27.86756273261054 >50 2.681131951275303 36.72732830392424 >100 0.4755251536191057 11.749144509246733 >500 0.0019772355659829544 0.24417426550985694 >1k 9.886177829914772E-4 0.4823851563377635 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 3711 0.2378509198376384 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2328 0.1492096311996826 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.032367209517113284 0.0 2 0.0 0.0 0.0 0.12677691173237637 0.0 3 0.0 0.0 0.0 0.18266642994806506 0.0 4 0.0 0.0 0.0 0.34789943219582353 0.0 5 0.0 0.0 0.0 0.5772900121200779 0.0 6 0.0 0.0 0.0 0.8862846994111732 0.0 7 0.0 0.0 0.0 1.0204964553098568 0.0 8 0.0 0.0 0.0 1.4229394425533306 0.0 9 0.0 0.0 0.0 1.6484203199418543 0.0 10 0.0 0.0 0.0 2.036185899305291 0.0 11 0.0 0.0 0.0 2.44349999134738 0.0 12 0.0 0.0 0.0 2.7648647210875894 0.0 13 0.0 0.0 0.0 2.892923502503812 0.0 14 0.0 0.0 0.0 2.938942624153886 0.0 15 0.0 0.0 0.0 3.0076508392080354 0.0 16 0.0 0.0 0.0 3.178459974580524 0.0 17 0.0 0.0 0.0 3.383046376122357 0.0 18 0.0 0.0 0.0 3.6862085563519527 0.0 19 0.0 0.0 0.0 3.816318329262329 0.0 20 0.0 0.0 0.0 3.9579649293273196 0.0 21 0.0 0.0 0.0 4.14242597683277 0.0 22 0.0 0.0 0.0 4.318683058361604 0.0 23 0.0 0.0 0.0 4.519936598725437 0.0 24 0.0 0.0 0.0 4.681452178890042 0.0 25 0.0 0.0 0.0 4.799896937677419 0.0 26 0.0 0.0 0.0 4.927378877735911 0.0 27 0.0 0.0 0.0 5.040375690366941 0.0 28 0.0 0.0 0.0 5.1568335511443575 0.0 29 0.0 0.0 0.0 5.2842513977186565 0.0 30 0.0 0.0 0.0 5.456662870195953 0.0 31 6.409348419230353E-5 0.0 0.0 5.6152301500877115 0.0 32 6.409348419230353E-5 0.0 0.0 5.7571972175736645 0.0 33 1.2818696838460706E-4 0.0 0.0 5.898459256733501 0.0 34 1.2818696838460706E-4 0.0 0.0 6.046835672638684 0.0 35 1.2818696838460706E-4 0.0 0.0 6.238090629468518 0.0 36 1.2818696838460706E-4 0.0 0.0 6.396529722391892 0.0 37 1.2818696838460706E-4 0.0 0.0 6.554327880473343 0.0 38 1.2818696838460706E-4 0.0 0.0 6.718599480458217 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTTAT 25 4.443575E-5 44.0 44 CGAACGC 20 7.857348E-4 44.0 37 CTCGTTA 20 7.857348E-4 44.0 32 CGTATCG 20 7.857348E-4 44.0 13 CAAGTCG 25 4.443575E-5 44.0 1 TTCGTTC 30 2.5283025E-6 44.0 14 CAATTCG 20 7.857348E-4 44.0 1 TCGATTG 50 2.7284841E-11 44.0 1 TCGATTC 20 7.857348E-4 44.0 11 GCGTTGT 20 7.857348E-4 44.0 29 ACTTACG 25 4.443575E-5 44.0 24 TCGATAC 25 4.443575E-5 44.0 24 CGCCTAT 20 7.857348E-4 44.0 26 CCCGTTC 25 4.443575E-5 44.0 14 CCGTAAG 20 7.857348E-4 44.0 29 GTTCGAC 20 7.857348E-4 44.0 30 CGTAGGA 40 8.3164196E-9 44.0 2 CTACGCG 20 7.857348E-4 44.0 1 TACGACC 40 8.3164196E-9 44.0 10 CGCTAGT 25 4.443575E-5 44.0 43 >>END_MODULE