##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547156_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 342885 Sequences flagged as poor quality 0 Sequence length 50 %GC 44 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.432419032620267 31.0 31.0 33.0 30.0 34.0 2 31.82441051664552 31.0 31.0 34.0 30.0 34.0 3 31.95270134301588 31.0 31.0 34.0 30.0 34.0 4 35.653111101389676 37.0 35.0 37.0 33.0 37.0 5 35.54447992767254 37.0 35.0 37.0 33.0 37.0 6 35.60184901643408 37.0 35.0 37.0 33.0 37.0 7 35.96818758475874 37.0 35.0 37.0 35.0 37.0 8 22.024078043658953 35.0 0.0 37.0 0.0 37.0 9 29.93620310016478 37.0 18.0 39.0 17.0 39.0 10 34.34545984805401 35.0 32.0 39.0 27.0 39.0 11 35.913740758563364 37.0 35.0 39.0 32.0 39.0 12 36.18915963078 37.0 35.0 39.0 32.0 39.0 13 36.21829184712075 38.0 35.0 39.0 32.0 39.0 14 37.29830701255523 39.0 35.0 41.0 32.0 41.0 15 37.61035624188868 39.0 35.0 41.0 33.0 41.0 16 37.69453023608499 39.0 35.0 41.0 33.0 41.0 17 37.667427854820126 39.0 35.0 41.0 33.0 41.0 18 37.62797731017688 39.0 36.0 41.0 33.0 41.0 19 37.62644326815113 39.0 36.0 41.0 33.0 41.0 20 37.50679382300188 39.0 35.0 41.0 33.0 41.0 21 37.40046371232337 39.0 35.0 41.0 33.0 41.0 22 37.37535325254823 39.0 35.0 41.0 33.0 41.0 23 37.2791169050848 39.0 35.0 41.0 32.0 41.0 24 37.143911223879726 39.0 35.0 41.0 32.0 41.0 25 36.98257724893186 38.0 35.0 41.0 32.0 41.0 26 36.883704449013514 38.0 35.0 41.0 32.0 41.0 27 36.72147221371597 38.0 35.0 40.0 31.0 41.0 28 36.75060151362702 38.0 35.0 40.0 31.0 41.0 29 36.676780844889684 38.0 35.0 40.0 31.0 41.0 30 36.58500663487758 38.0 35.0 40.0 31.0 41.0 31 36.496131355993995 38.0 35.0 40.0 31.0 41.0 32 36.239937588404274 38.0 35.0 40.0 30.0 41.0 33 36.10564183326771 38.0 35.0 40.0 30.0 41.0 34 36.0414191346953 38.0 35.0 40.0 30.0 41.0 35 35.884074835586276 38.0 35.0 40.0 30.0 41.0 36 35.72526357233475 38.0 35.0 40.0 29.0 41.0 37 35.64550213628476 38.0 35.0 40.0 29.0 41.0 38 35.5699403590125 38.0 35.0 40.0 28.0 41.0 39 35.49481604619625 38.0 35.0 40.0 27.0 41.0 40 35.368511308456185 38.0 35.0 40.0 27.0 41.0 41 35.37148315032737 38.0 35.0 40.0 27.0 41.0 42 35.13820668737332 38.0 34.0 40.0 26.0 41.0 43 35.166178164690784 38.0 34.0 40.0 26.0 41.0 44 34.948886652959445 37.0 34.0 40.0 26.0 41.0 45 34.72934949035391 37.0 34.0 40.0 24.0 41.0 46 34.79760852764046 37.0 34.0 40.0 25.0 41.0 47 34.66379106697581 37.0 34.0 40.0 24.0 41.0 48 34.6507458768975 37.0 34.0 40.0 24.0 41.0 49 34.579777476413376 37.0 34.0 40.0 24.0 41.0 50 34.11018854718054 36.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 0.0 13 0.0 14 1.0 15 5.0 16 18.0 17 48.0 18 119.0 19 243.0 20 475.0 21 790.0 22 1251.0 23 1813.0 24 2690.0 25 3749.0 26 4886.0 27 5432.0 28 6041.0 29 6956.0 30 8507.0 31 10833.0 32 13607.0 33 18242.0 34 28445.0 35 46659.0 36 33257.0 37 47048.0 38 53843.0 39 47926.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.06847776951456 25.494845210493317 28.51830788748414 13.918369132507985 2 31.03343686658792 26.28986394855418 29.6982953468364 12.978403838021494 3 28.226081630867494 25.852107849570555 32.41261647491142 13.509194044650538 4 25.12358370882366 28.522682532044268 31.82728903276609 14.526444726365984 5 22.96017615235429 32.27846070840077 30.34311795499949 14.418245184245446 6 19.61473963573793 41.949633258964376 27.43718739519081 10.998439710106886 7 87.35902707904982 3.7849424734240342 7.134170348659172 1.721860098866967 8 54.22430260874638 40.06999431296207 4.0144654913454945 1.6912375869460607 9 83.70094929786956 5.150998148067136 8.621841142073873 2.5262114119894425 10 46.82707030053808 29.5011446986599 12.895285591379032 10.776499409422986 11 39.88538431252461 21.37713810752876 24.127331320996838 14.610146258949793 12 38.03024337605903 21.299561077329134 25.39976960205317 15.27042594455867 13 20.885719701940882 38.20172944281611 26.009303410764538 14.90324744447847 14 15.971244003091414 40.889802703530336 26.97901628825991 16.159937005118334 15 14.018402671449612 26.147250535893956 44.447555302798314 15.386791489858116 16 16.28242705280196 21.943508756580194 43.48046721203902 18.293596978578826 17 17.25884771862286 22.313895329337825 28.201000335389416 32.2262566166499 18 20.72269128133339 26.31698674482698 32.91745045715035 20.04287151668927 19 26.853609810869532 28.895693891537977 24.62983215947038 19.62086413812211 20 28.855738804555465 27.08459104364437 23.896058445251324 20.163611706548842 21 21.334849876780844 29.958732519649445 28.413608061011708 20.292809542558 22 21.639616781136535 26.66083380725316 25.88214707555011 25.817402336060198 23 18.682357058488996 33.26129751957653 23.996966913104977 24.05937850882949 24 20.150487772868455 27.988975895708474 34.77784096708809 17.08269536433498 25 18.702772066436268 28.306575090773872 31.8660775478659 21.124575294923954 26 17.924960263645247 35.04644414308004 26.07288157837176 20.955714014902956 27 18.256266678332388 33.85654082272482 27.945229450107178 19.941963048835614 28 16.230514604021756 30.759292474153142 35.339836971579395 17.670355950245707 29 16.636481619201774 26.68241538708313 34.86795864502676 21.813144348688336 30 19.644778861717484 31.09818160607784 30.607346486431307 18.649693045773365 31 26.944310774749553 30.000145821485336 23.303439928839115 19.752103474925995 32 28.083176575236596 30.565641541624743 23.106580923633288 18.244600959505377 33 24.299983959636613 31.324788194292548 23.78698397421876 20.58824387185208 34 18.751476442539044 30.361199819181355 26.903189115884334 23.984134622395263 35 18.899631071642094 29.467022471090893 29.109759832013648 22.523586625253365 36 27.674293130349824 27.557635942079706 24.831940738148358 19.936130189422112 37 19.719731105181037 32.67334529069513 27.92423115621856 19.682692447905275 38 18.831969902445426 34.29254706388439 24.681452965279902 22.194030068390276 39 19.874301879638946 32.66197121483879 25.378479665193872 22.08524724032839 40 23.11270542601747 27.951062309520687 25.321025999970836 23.61520626449101 41 18.33967656794552 26.70866325444391 26.769033349373693 28.182626828236874 42 22.049083511964653 29.651049185587002 22.539626988640507 25.760240313807834 43 22.138909546932645 29.350656925791448 25.066713329541972 23.443720197733935 44 20.323723697449584 32.5934351167301 25.92064394767925 21.16219723814107 45 18.288639048077343 35.056068361112324 23.20894760634032 23.44634498447001 46 21.814602563541712 32.92794960409467 24.931682634119312 20.32576519824431 47 21.557665106376774 29.480438047741952 25.898479081907926 23.063417763973344 48 22.77264972221007 25.954474532277587 28.27711915073567 22.995756594776676 49 20.34180556163145 25.576796885253074 29.547515930997275 24.5338816221182 50 19.048660629657174 31.82962217653149 27.188415941204774 21.93330125260656 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 346.0 1 397.5 2 449.0 3 1941.0 4 3433.0 5 2366.5 6 1300.0 7 1474.5 8 1649.0 9 1891.5 10 2134.0 11 2353.0 12 2572.0 13 2560.0 14 2548.0 15 2474.0 16 2400.0 17 2312.0 18 2224.0 19 2055.0 20 1886.0 21 1897.5 22 1909.0 23 1876.5 24 1844.0 25 1992.0 26 2140.0 27 2539.5 28 2939.0 29 3505.5 30 4072.0 31 4702.5 32 5333.0 33 6520.0 34 7707.0 35 9356.0 36 11005.0 37 12268.0 38 13531.0 39 16665.5 40 19800.0 41 23977.5 42 28155.0 43 30605.0 44 33055.0 45 34038.5 46 35022.0 47 34537.5 48 34053.0 49 32485.0 50 30917.0 51 27205.5 52 23494.0 53 20398.0 54 17302.0 55 15382.5 56 13463.0 57 12037.5 58 10612.0 59 9588.5 60 8565.0 61 7527.0 62 6489.0 63 5428.5 64 4368.0 65 3320.0 66 2272.0 67 1842.5 68 1413.0 69 1211.0 70 1009.0 71 841.5 72 674.0 73 519.5 74 365.0 75 299.0 76 233.0 77 168.5 78 104.0 79 83.0 80 62.0 81 44.0 82 26.0 83 17.5 84 9.0 85 5.0 86 1.0 87 1.0 88 1.0 89 0.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 342885.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.70086820917664 #Duplication Level Percentage of deduplicated Percentage of total 1 74.21765766870892 30.94940761236619 2 8.05269599580018 6.716088288988555 3 3.72539605311783 4.660567495141603 4 2.4516675770522256 4.089466660934651 5 1.7997579423284262 3.7525734380728313 6 1.4575197419029926 3.6467903201621903 7 1.1671626175973886 3.4070186146574435 8 1.0314134775822577 3.440866999826104 9 0.8456925744658802 3.173950313395288 >10 5.2138154026589625 33.862580061642696 >50 0.025984435944206026 0.7251156978558488 >100 0.009129666683099415 0.6372583838991628 >500 0.0014045641050922176 0.4688651988155146 >1k 7.022820525461088E-4 0.46945091424189245 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1603 0.46750368199250475 No Hit CGTTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 985 0.2872683261151698 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 616 0.17965206993598437 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCA 359 0.10469982647243245 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.05366230660425507 0.0 2 0.0 0.0 0.0 0.16244513466614172 0.0 3 0.0 0.0 0.0 0.2653951033145224 0.0 4 0.0 0.0 0.0 0.4190909488604051 0.0 5 0.0 0.0 0.0 0.7168584219198857 0.0 6 0.0 0.0 0.0 1.254939702815813 0.0 7 0.0 0.0 0.0 1.550374032109891 0.0 8 0.0 0.0 0.0 2.2056957872172887 0.0 9 0.0 0.0 0.0 2.7268617758140485 0.0 10 0.0 0.0 0.0 3.4323461218775972 0.0 11 0.0 0.0 0.0 4.140746897647899 0.0 12 0.0 0.0 0.0 4.742697989121718 0.0 13 0.0 0.0 0.0 5.070796331131429 0.0 14 0.0 0.0 0.0 5.231199965002843 0.0 15 0.0 0.0 0.0 5.375271592516441 0.0 16 0.0 0.0 0.0 5.638041909094886 0.0 17 0.0 0.0 0.0 5.941058955626522 0.0 18 0.0 0.0 0.0 6.360733190428277 0.0 19 0.0 0.0 0.0 6.576548988727999 0.0 20 0.0 0.0 0.0 6.803155576942706 0.0 21 0.0 0.0 0.0 7.071758752934658 0.0 22 0.0 0.0 0.0 7.346486431310789 0.0 23 0.0 0.0 0.0 7.6565029091386325 0.0 24 0.0 0.0 0.0 7.909357364714117 0.0 25 0.0 0.0 0.0 8.114674016069527 0.0 26 0.0 0.0 0.0 8.3074500196859 0.0 27 0.0 0.0 0.0 8.494976449830117 0.0 28 0.0 0.0 0.0 8.712833748924567 0.0 29 0.0 0.0 0.0 8.939440337139274 0.0 30 0.0 0.0 0.0 9.20775187016055 0.0 31 0.0 0.0 0.0 9.475480117240474 0.0 32 0.0 0.0 0.0 9.693337416334924 0.0 33 0.0 0.0 0.0 9.927235078816512 0.0 34 0.0 0.0 0.0 10.14450909196961 0.0 35 0.0 0.0 0.0 10.413987196873588 0.0 36 0.0 0.0 0.0 10.674132726715955 0.0 37 0.0 0.0 0.0 10.91765460722983 0.0 38 0.0 0.0 0.0 11.159426629919652 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGGTAGT 20 7.8487437E-4 44.000004 7 ATATGCG 20 7.8487437E-4 44.000004 1 CGTTAGA 20 7.8487437E-4 44.000004 2 CGCTCCC 20 7.8487437E-4 44.000004 19 TATCTAG 20 7.8487437E-4 44.000004 1 AGCGATA 65 0.0 44.000004 8 GCGATAC 40 8.283678E-9 44.000004 9 ATGGTCG 20 7.8487437E-4 44.000004 44 TATACGA 20 7.8487437E-4 44.000004 2 ACGAGCC 20 7.8487437E-4 44.000004 5 CCGTTGG 20 7.8487437E-4 44.000004 1 ACCGCTC 35 1.442113E-7 44.0 18 TGAACGC 25 4.4362845E-5 44.0 29 AAGCGAC 30 2.5225017E-6 44.0 15 CGCGACC 90 0.0 44.0 10 TATGCGA 25 4.4362845E-5 44.0 2 GTAGACG 25 4.4362845E-5 44.0 1 CTACGGG 30 2.5225017E-6 44.0 3 TCGCTAT 30 2.5225017E-6 44.0 23 AGACCGA 100 0.0 44.0 8 >>END_MODULE