##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547155_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1654165 Sequences flagged as poor quality 0 Sequence length 50 %GC 47 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.558122678209248 31.0 31.0 33.0 30.0 34.0 2 31.956023129494337 31.0 31.0 34.0 30.0 34.0 3 32.1203241514601 33.0 31.0 34.0 30.0 34.0 4 35.79714296941357 37.0 35.0 37.0 35.0 37.0 5 35.70224917103191 37.0 35.0 37.0 33.0 37.0 6 35.75262624949748 37.0 35.0 37.0 35.0 37.0 7 36.03512708828926 37.0 35.0 37.0 35.0 37.0 8 22.025496851885997 35.0 0.0 37.0 0.0 37.0 9 29.96199230427436 37.0 18.0 39.0 17.0 39.0 10 34.39249168009237 35.0 32.0 39.0 27.0 39.0 11 36.02806854213455 37.0 35.0 39.0 32.0 39.0 12 36.47000571285211 37.0 35.0 39.0 33.0 39.0 13 36.60780393733394 39.0 35.0 39.0 33.0 39.0 14 37.70215969990902 39.0 36.0 41.0 33.0 41.0 15 37.93389534901294 40.0 36.0 41.0 33.0 41.0 16 37.989979234236 40.0 36.0 41.0 33.0 41.0 17 37.94065706867211 40.0 36.0 41.0 33.0 41.0 18 37.904164336689504 40.0 36.0 41.0 33.0 41.0 19 37.934189757370035 40.0 36.0 41.0 33.0 41.0 20 37.87295825990757 40.0 36.0 41.0 33.0 41.0 21 37.77081488243313 40.0 36.0 41.0 33.0 41.0 22 37.7309476382344 40.0 36.0 41.0 33.0 41.0 23 37.61861362076939 39.0 35.0 41.0 33.0 41.0 24 37.55059440865936 39.0 35.0 41.0 33.0 41.0 25 37.40795990726439 39.0 35.0 41.0 32.0 41.0 26 37.35717718607273 39.0 35.0 41.0 32.0 41.0 27 37.2758624441939 39.0 35.0 41.0 32.0 41.0 28 37.3107350234106 39.0 35.0 41.0 32.0 41.0 29 37.223142794098536 39.0 35.0 41.0 32.0 41.0 30 37.136432580788494 39.0 35.0 41.0 32.0 41.0 31 37.10254055671593 39.0 35.0 41.0 32.0 41.0 32 36.95100911940465 39.0 35.0 41.0 31.0 41.0 33 36.885984167238455 39.0 35.0 41.0 31.0 41.0 34 36.840511073562794 39.0 35.0 41.0 31.0 41.0 35 36.7182505977336 39.0 35.0 41.0 31.0 41.0 36 36.62413423086572 39.0 35.0 41.0 31.0 41.0 37 36.60228393177222 39.0 35.0 41.0 31.0 41.0 38 36.50308705600711 39.0 35.0 41.0 30.0 41.0 39 36.42076213678805 39.0 35.0 41.0 30.0 41.0 40 36.345602766350396 39.0 35.0 41.0 30.0 41.0 41 36.330280836555 39.0 35.0 41.0 30.0 41.0 42 36.10646700903477 38.0 35.0 40.0 30.0 41.0 43 36.12500989925431 38.0 35.0 40.0 30.0 41.0 44 35.93296738838024 38.0 35.0 40.0 30.0 41.0 45 35.72142984526936 38.0 35.0 40.0 29.0 41.0 46 35.77287574093273 38.0 35.0 40.0 29.0 41.0 47 35.643944830171115 38.0 35.0 40.0 29.0 41.0 48 35.64550513401021 38.0 35.0 40.0 29.0 41.0 49 35.566103139650515 38.0 34.0 40.0 29.0 41.0 50 35.116849286498024 37.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 3.0 11 2.0 12 2.0 13 4.0 14 14.0 15 38.0 16 60.0 17 154.0 18 383.0 19 752.0 20 1364.0 21 2388.0 22 3840.0 23 5827.0 24 8399.0 25 11956.0 26 15955.0 27 19511.0 28 22898.0 29 27957.0 30 35394.0 31 45848.0 32 59674.0 33 80293.0 34 126027.0 35 190767.0 36 166476.0 37 251537.0 38 292602.0 39 284038.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 36.21325563048426 23.21950954106755 28.080753733756907 12.486481094691278 2 31.286721699467705 25.573385968147072 28.815867824551965 14.324024507833258 3 30.730791668303947 25.330544413646766 29.618327071362287 14.320336846686999 4 26.736631472676546 28.010506811593768 29.1460646307956 16.10679708493409 5 23.492215105506403 32.848778688945785 28.194345787753942 15.464660417793871 6 21.329311163033918 41.40838429056352 26.2250138287293 11.037290717673267 7 89.09733914089585 3.9681652072193527 5.191803719701481 1.742691932183307 8 54.99916876490556 40.14907823584709 3.1761644092336616 1.6755885900136929 9 84.94702765443593 4.711682329150961 7.049780402801413 3.291509613611701 10 44.50886096610677 25.699310528272573 15.205012801020453 14.586815704600205 11 36.63649031384414 25.468015584902354 20.996273044103823 16.89922105714968 12 32.96297527755696 23.89543969313823 24.904226603754765 18.237358425550052 13 23.433696154857586 32.492828708139754 26.616087270616895 17.45738786638576 14 20.069944654856076 34.479631717513065 27.509347616471153 17.94107601115971 15 18.834275903552548 25.295481406026603 37.68940825129295 18.1808344391279 16 21.60824343399842 23.15113667620824 35.88710920615537 19.353510683637968 17 21.647477730456153 22.85624469143042 27.554143631378974 27.942133946734454 18 24.505475572267578 24.262815378151515 30.364927319826013 20.86678172975489 19 27.921035688700947 26.418464905254314 25.487360692554855 20.173138713489887 20 30.328836603361818 25.36210112050491 24.62517342586743 19.683888850265845 21 25.640670670700928 27.081337109659557 26.774717153367412 20.503275066272106 22 25.457013054924992 24.05539955203985 26.204580558771344 24.283006834263812 23 22.458400461864443 29.217399715264197 25.681960384846736 22.64223943802462 24 22.284899027606073 25.992751629976453 31.572545665033413 20.149803677384057 25 22.302672345261808 26.738445076518968 29.594266593719492 21.364615984499732 26 20.88473640779487 31.03964840266842 25.983018622688785 22.092596566847927 27 21.252232999730982 29.415203441011023 27.877448743021404 21.45511481623659 28 19.76169245510575 27.570163798653702 32.880395849265334 19.787747896975212 29 20.49898287051171 26.37693337726285 31.86616812712154 21.257915625103905 30 21.781019426719826 27.51321663800165 30.10455426151563 20.601209673762895 31 27.276480883104163 26.189467193417826 25.440146539190465 21.093905384287538 32 27.517206566454977 26.850163073212162 26.237769509087666 19.39486085124519 33 25.219551858490536 26.778223454129424 26.01977432722854 21.982450360151496 34 21.63127620279718 27.18743293444124 28.834608397590326 22.34668246517125 35 21.315527773831512 27.2581634842957 29.696614303893504 21.729694437979283 36 27.027170808232555 27.423624608186003 26.014273062239862 19.534931521341584 37 22.716536742102512 28.966034222704508 27.341951981815598 20.975477053377382 38 22.58662225352368 30.73768336290515 24.824428034688196 21.851266348882973 39 22.314218956391898 28.370748988160187 26.479341540898275 22.835690514549636 40 24.319278911112253 26.18608179957864 26.02098339645682 23.473655892852285 41 20.41646389568151 26.14376437658879 27.117851000353653 26.321920727376046 42 23.573101836878426 27.021971810550944 25.235874293072335 24.1690520594983 43 23.138743716618354 26.425961134469656 26.446152590581956 23.989142558330034 44 22.56582626279724 28.2294087953741 27.565569335586233 21.639195606242424 45 21.416545507854416 30.4129878216502 25.097375412972706 23.073091257522677 46 23.232688395655813 28.718175030906835 26.659432402450783 21.38970417098657 47 22.81580132574441 27.34981093179943 27.151523578361285 22.682864164094877 48 23.13154975471008 25.6164892861353 28.721076797054707 22.530884162099913 49 23.126411210489884 24.650322065815683 29.225258665248028 22.998008058446405 50 20.76334585727542 28.973409544997025 28.104149223324153 22.1590953744034 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 811.0 1 1442.0 2 2073.0 3 5438.0 4 8803.0 5 6537.5 6 4272.0 7 4459.0 8 4646.0 9 4936.5 10 5227.0 11 5331.0 12 5435.0 13 5462.0 14 5489.0 15 5329.5 16 5170.0 17 5202.5 18 5235.0 19 5538.0 20 5841.0 21 6412.5 22 6984.0 23 7782.0 24 8580.0 25 9882.5 26 11185.0 27 13202.5 28 15220.0 29 18673.5 30 22127.0 31 25829.0 32 29531.0 33 34732.0 34 39933.0 35 44844.0 36 49755.0 37 56725.0 38 63695.0 39 74716.5 40 85738.0 41 100470.5 42 115203.0 43 127655.5 44 140108.0 45 143937.0 46 147766.0 47 145145.5 48 142525.0 49 136684.0 50 130843.0 51 123659.5 52 116476.0 53 107806.0 54 99136.0 55 91824.5 56 84513.0 57 78597.0 58 72681.0 59 67859.0 60 63037.0 61 57723.0 62 52409.0 63 45746.0 64 39083.0 65 32172.0 66 25261.0 67 20299.0 68 15337.0 69 12409.0 70 9481.0 71 7783.0 72 6085.0 73 5010.5 74 3936.0 75 3162.0 76 2388.0 77 1796.0 78 1204.0 79 856.0 80 508.0 81 365.0 82 222.0 83 168.0 84 114.0 85 83.5 86 53.0 87 38.0 88 23.0 89 18.0 90 13.0 91 10.0 92 7.0 93 4.5 94 2.0 95 1.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1654165.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.227838666048775 #Duplication Level Percentage of deduplicated Percentage of total 1 75.24103517028142 16.72445590831517 2 6.022253310882738 2.677233500007592 3 2.322505727779946 1.5487284785420052 4 1.3987966939780483 1.2436890896138582 5 1.0515495116273512 1.1686836446907574 6 0.8740473887426128 1.165691060607121 7 0.7192768829219229 1.1191579356864871 8 0.6348256672699105 1.1288642010513865 9 0.5651010460547108 1.1304877393547563 >10 10.022369793633452 54.36348275810635 >50 1.088591953577934 15.148941090784984 >100 0.05744789094588953 1.9950851025934542 >500 0.0013743514401041023 0.17302875482726987 >1k 8.246108640624614E-4 0.4124707358188202 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2856 0.1726550857985751 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 2086 0.1261059205097436 No Hit CGTTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1809 0.10936031169804705 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.029440835708650588 0.0 2 0.0 0.0 0.0 0.09158699404231138 0.0 3 0.0 0.0 0.0 0.13547620702892396 0.0 4 0.0 0.0 0.0 0.2371589291273845 0.0 5 0.0 0.0 0.0 0.4003832749453652 0.0 6 0.0 0.0 0.0 0.6681921090096816 0.0 7 0.0 0.0 0.0 0.7999202014309335 0.0 8 0.0 0.0 0.0 1.186217819866821 0.0 9 0.0 0.0 0.0 1.4763944346543423 0.0 10 0.0 0.0 0.0 1.9264100014206564 0.0 11 0.0 0.0 0.0 2.2882239679838468 0.0 12 0.0 0.0 0.0 2.616546716923644 0.0 13 0.0 0.0 0.0 2.760305048166295 0.0 14 0.0 0.0 0.0 2.818823998815112 0.0 15 0.0 0.0 0.0 2.885383259832 0.0 16 0.0 0.0 0.0 3.034521949140503 0.0 17 0.0 0.0 0.0 3.1965372257302023 0.0 18 0.0 0.0 0.0 3.427408994870524 0.0 19 0.0 0.0 0.0 3.538764270795235 0.0 20 0.0 0.0 0.0 3.6636611220766975 0.0 21 0.0 0.0 0.0 3.823137353287006 0.0 22 0.0 0.0 0.0 3.981464968730447 0.0 23 0.0 0.0 0.0 4.15363642683771 0.0 24 0.0 0.0 0.0 4.306160509985401 0.0 25 0.0 0.0 0.0 4.425012015125456 0.0 26 0.0 0.0 0.0 4.5372136395099645 0.0 27 0.0 0.0 0.0 4.648448008511847 0.0 28 0.0 0.0 0.0 4.773707580561794 0.0 29 0.0 0.0 0.0 4.906886556056984 0.0 30 0.0 0.0 0.0 5.0844988256915125 0.0 31 0.0 0.0 0.0 5.231521643850523 0.0 32 0.0 0.0 0.0 5.38265529738569 0.0 33 0.0 0.0 0.0 5.5349375666877245 0.0 34 0.0 0.0 0.0 5.6815372106168365 0.0 35 0.0 0.0 0.0 5.860419002941061 0.0 36 0.0 0.0 0.0 6.009618145710978 0.0 37 0.0 0.0 0.0 6.160691345784731 0.0 38 0.0 0.0 0.0 6.330142398128361 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCGATC 20 7.857486E-4 44.0 42 ACGTTAG 40 8.3164196E-9 44.0 1 CGTTAGA 55 1.8189894E-12 44.0 2 CTAACGT 25 4.4436903E-5 44.0 27 ACGCGCT 25 4.4436903E-5 44.0 16 TACGAGT 50 1.3478711E-9 39.600002 4 TTCGACA 45 2.3519533E-8 39.11111 43 CGTTTTT 3495 0.0 39.02718 1 CACAACG 370 0.0 38.64865 12 GAGCGAT 1245 0.0 38.522087 7 TATCACG 40 4.1259955E-7 38.5 1 AGCGTAT 40 4.1259955E-7 38.5 21 CGACGGT 160 0.0 38.5 28 ACGAGAT 145 0.0 37.931038 5 GCGCGAC 265 0.0 37.35849 9 TTTCGCA 90 0.0 36.666668 13 ACGGGCC 60 1.9826984E-10 36.666668 5 GTCCGAT 30 1.3013421E-4 36.666668 14 ACGTCGA 30 1.3013421E-4 36.666668 2 ATACGCG 30 1.3013421E-4 36.666668 1 >>END_MODULE