##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547153_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3115027 Sequences flagged as poor quality 0 Sequence length 50 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.999392621636986 31.0 31.0 33.0 30.0 34.0 2 31.37502692593034 31.0 31.0 34.0 30.0 34.0 3 31.518050726366095 31.0 31.0 34.0 30.0 34.0 4 35.271076302067364 37.0 35.0 37.0 33.0 37.0 5 35.046163965834005 37.0 35.0 37.0 32.0 37.0 6 35.11784681160067 37.0 35.0 37.0 32.0 37.0 7 35.69360393986954 37.0 35.0 37.0 35.0 37.0 8 35.755884940965196 37.0 35.0 37.0 35.0 37.0 9 37.55003632392271 39.0 37.0 39.0 35.0 39.0 10 36.77841636685653 39.0 37.0 39.0 32.0 39.0 11 36.32837853411864 38.0 35.0 39.0 32.0 39.0 12 35.446024384379335 37.0 35.0 39.0 30.0 39.0 13 35.05007725454707 37.0 34.0 39.0 29.0 39.0 14 35.92472874231909 38.0 34.0 40.0 29.0 41.0 15 36.30814885392647 38.0 35.0 40.0 30.0 41.0 16 36.45788046138926 38.0 35.0 40.0 31.0 41.0 17 36.37542949065931 38.0 35.0 40.0 31.0 41.0 18 36.350707714571975 38.0 35.0 40.0 31.0 41.0 19 36.31481556981689 37.0 35.0 40.0 31.0 41.0 20 36.14514834060829 37.0 34.0 40.0 30.0 41.0 21 35.97357422584138 37.0 34.0 40.0 30.0 41.0 22 35.88257726177012 37.0 34.0 40.0 30.0 41.0 23 35.77093938511609 37.0 34.0 40.0 30.0 41.0 24 35.76043578434473 37.0 34.0 40.0 30.0 41.0 25 35.64445412511673 37.0 34.0 40.0 29.0 41.0 26 35.523635589675465 36.0 34.0 40.0 29.0 41.0 27 35.34483746047787 36.0 34.0 40.0 29.0 41.0 28 35.38170423562942 36.0 34.0 40.0 29.0 41.0 29 35.34640213391409 36.0 34.0 40.0 29.0 41.0 30 35.31134144262634 36.0 34.0 40.0 29.0 41.0 31 35.20776160206637 36.0 34.0 40.0 29.0 41.0 32 35.008196076631116 36.0 34.0 40.0 27.0 41.0 33 34.843797180570185 36.0 33.0 40.0 27.0 41.0 34 34.839928835287786 36.0 34.0 40.0 27.0 41.0 35 34.62644497142401 36.0 33.0 40.0 25.0 41.0 36 34.36662603566518 36.0 33.0 40.0 24.0 41.0 37 34.42935422389597 36.0 33.0 40.0 24.0 41.0 38 34.44473932328676 36.0 33.0 40.0 24.0 41.0 39 34.4146981711555 36.0 33.0 40.0 24.0 41.0 40 34.369985878132034 36.0 33.0 40.0 24.0 41.0 41 34.470160932794485 36.0 33.0 40.0 24.0 41.0 42 34.24596094993719 36.0 33.0 40.0 24.0 41.0 43 34.308182561499464 36.0 33.0 40.0 24.0 41.0 44 34.114721638046795 35.0 33.0 40.0 23.0 41.0 45 33.940851556021826 35.0 33.0 40.0 23.0 41.0 46 34.03309473722057 35.0 33.0 40.0 23.0 41.0 47 33.90084355609117 35.0 33.0 40.0 23.0 41.0 48 33.98250769575994 35.0 33.0 40.0 23.0 41.0 49 33.94231350161652 36.0 33.0 40.0 24.0 41.0 50 33.40482923583006 35.0 32.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 1.0 12 4.0 13 8.0 14 27.0 15 80.0 16 249.0 17 724.0 18 1651.0 19 3252.0 20 5774.0 21 9602.0 22 14388.0 23 21068.0 24 29458.0 25 40671.0 26 53087.0 27 63943.0 28 73740.0 29 85474.0 30 102498.0 31 124831.0 32 153463.0 33 194205.0 34 303438.0 35 416589.0 36 227791.0 37 270155.0 38 373291.0 39 545564.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.155749211804583 25.404787823668944 30.19652799157118 13.242934972955291 2 29.385555887637572 26.87379595746682 30.37485710396732 13.36579105092829 3 28.33134351644464 26.20426725033202 31.897861559466417 13.56652767375692 4 25.210824817890824 28.94652277492298 31.272377414385172 14.570274992801025 5 22.756528274072746 33.12606921224118 30.113254235035527 14.004148278650556 6 20.49263136402991 41.40692841506671 27.677705522295632 10.422734698607748 7 88.75056299672522 4.364617064314371 5.502327909196293 1.382492029764108 8 90.53610129221994 3.0353508974400545 4.930711676014365 1.4978361343256414 9 86.05649325029927 5.6835783445857775 6.369222481859708 1.89070592325524 10 46.123645156205704 35.22839448903653 10.904945607213037 7.743014747544724 11 40.15608853470612 19.77652200125392 26.92166071112706 13.145728752912897 12 37.108217681580285 23.051613998851376 26.029983046695904 13.810185272872433 13 19.91568612406891 39.67044266389986 27.481366935182262 12.932504276848963 14 14.518333227930288 42.012830065357385 29.137243433202986 14.331593273509347 15 13.478053320244094 26.169147169510893 46.546370224078316 13.806429286166702 16 15.991161553334852 22.61415390621012 44.84089544007163 16.5537891003834 17 15.516173696086744 22.94673529314513 29.729694156744067 31.807396854024056 18 19.67873793710295 26.294635648422954 35.60367213510509 18.42295427936901 19 27.488622088989917 26.095793070172423 27.588524914872327 18.82705992596533 20 29.57329101802328 25.982150395486137 26.893282144905967 17.551276441584616 21 21.733070050436158 30.431325314355224 29.874219388788603 17.961385246420015 22 21.560102047269574 26.431424189902685 26.878033480929698 25.130440281898036 23 17.751659937458005 32.40251208095468 26.839029003600935 23.006798977986385 24 17.621131373821157 26.070528441647532 40.54873360648239 15.75960657804892 25 16.273727322427703 28.009805372473494 36.43570344655119 19.280763858547616 26 15.658515961498889 36.71955331366309 28.567585449500115 19.0543452753379 27 16.423870483305603 37.28070414798973 29.102283864634238 17.193141504070432 28 13.875096427735617 31.469422255409025 38.49902424601777 16.156457070837586 29 15.45126254122356 26.962655540385366 37.402532947547485 20.183548970843592 30 17.64697384645462 33.10549154148584 31.642582873278467 17.60495173878108 31 26.76731212923676 28.839942639341487 26.984966743466426 17.407778487955323 32 28.261135457252855 27.698379500402403 28.250766365748998 15.78971867659574 33 26.83270482085709 29.029475506953872 25.85248859801215 18.285331074176884 34 18.75999790692023 28.771403907574477 28.951787576801102 23.516810608704194 35 18.441348983491956 28.096610398561555 32.67560762715701 20.786432990789486 36 28.590378189338328 27.356456300378778 26.858226268985792 17.194939241297106 37 18.814154740873835 34.7480134201084 29.333453610514454 17.104378228503318 38 18.50487973298466 35.14049797963228 25.744142827654464 20.6104794597286 39 19.52689334634981 33.98381458651883 27.710193202177702 18.77909886495366 40 23.301467370908824 27.698828934709073 26.792512552860696 22.207191141521406 41 16.397161244509277 26.812191355002703 28.406687967712642 28.38395943277538 42 19.872251508574404 26.88419715142116 26.76496865035199 26.47858268965245 43 20.384446105924603 27.105896674410847 27.756067603908406 24.753589615756137 44 17.678530555272875 31.595616988231562 30.437424779945726 20.288427676549833 45 17.064506985011686 38.05780816667079 24.92122861214365 19.956456236173874 46 20.368009651280712 34.75761205280083 26.27386536296475 18.600512932953713 47 19.906729540386007 29.526614055030663 27.826660892505906 22.739995512077424 48 21.279077195799587 26.84185401924285 32.1437342276648 19.73533455729276 49 20.461684601770706 27.093408821175547 32.14068449486955 20.3042220821842 50 18.253966980061488 34.987561905562934 27.62476858146013 19.133702532915446 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 3827.0 1 4435.5 2 5044.0 3 11568.5 4 18093.0 5 13810.5 6 9528.0 7 10454.0 8 11380.0 9 12592.5 10 13805.0 11 14750.0 12 15695.0 13 15651.0 14 15607.0 15 15312.5 16 15018.0 17 14327.0 18 13636.0 19 14058.0 20 14480.0 21 16392.0 22 18304.0 23 23809.5 24 29315.0 25 33937.5 26 38560.0 27 40864.0 28 43168.0 29 55807.0 30 68446.0 31 77321.5 32 86197.0 33 98331.0 34 110465.0 35 121325.5 36 132186.0 37 140447.5 38 148709.0 39 173532.0 40 198355.0 41 247113.0 42 295871.0 43 335883.0 44 375895.0 45 357962.0 46 340029.0 47 304734.0 48 269439.0 49 238764.0 50 208089.0 51 185504.5 52 162920.0 53 141648.5 54 120377.0 55 105961.0 56 91545.0 57 80729.0 58 69913.0 59 65094.5 60 60276.0 61 52287.0 62 44298.0 63 35838.5 64 27379.0 65 21742.0 66 16105.0 67 12771.5 68 9438.0 69 7405.5 70 5373.0 71 4386.5 72 3400.0 73 2678.0 74 1956.0 75 1696.0 76 1436.0 77 1101.0 78 766.0 79 586.5 80 407.0 81 254.5 82 102.0 83 75.0 84 48.0 85 55.0 86 62.0 87 51.0 88 40.0 89 42.5 90 45.0 91 22.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 3115027.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.046990647330343 #Duplication Level Percentage of deduplicated Percentage of total 1 81.00969367901416 13.809714904892505 2 8.505839239110019 2.8999792391360786 3 2.709576506439733 1.3857037609051248 4 1.2455463291367592 0.8493126649444391 5 0.7310022007437909 0.623069383962865 6 0.48505419091859514 0.4961228553622607 7 0.34128109993110745 0.4072471003045341 8 0.26666916932183 0.363672546828847 9 0.20960995084107698 0.3215896984417691 >10 2.013990345710306 7.971285352450537 >50 0.857539743520592 10.77382057715958 >100 1.5911481271504588 55.83480092461717 >500 0.030183861673653382 3.2512016746732986 >1k 0.00267451938880473 0.6844412284052399 >5k 0.0 0.0 >10k+ 1.9103709920033785E-4 0.3280380879157816 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10073 0.32336798364829583 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 4704 0.1510099270407608 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.04019226799639297 0.0 2 0.0 0.0 0.0 0.16359408762749086 0.0 3 0.0 0.0 0.0 0.22699642731828648 0.0 4 0.0 0.0 0.0 0.36619265258374967 0.0 5 0.0 0.0 0.0 0.6039755032620905 0.0 6 0.0 0.0 0.0 0.9156260924865178 0.0 7 0.0 0.0 0.0 1.0827835521168838 0.0 8 0.0 0.0 0.0 1.4951074260351516 0.0 9 0.0 0.0 0.0 1.6532761995321388 0.0 10 0.0 0.0 0.0 1.9206575095496765 0.0 11 0.0 0.0 0.0 2.1934641336977174 0.0 12 0.0 0.0 0.0 2.4486786149847175 0.0 13 0.0 0.0 0.0 2.551149636905234 0.0 14 0.0 0.0 0.0 2.5870080740873194 0.0 15 0.0 0.0 0.0 2.6394955806161553 0.0 16 0.0 0.0 0.0 2.747199301964317 0.0 17 0.0 0.0 0.0 2.884116253245959 0.0 18 0.0 0.0 0.0 3.0698931341526094 0.0 19 0.0 0.0 0.0 3.1632470601378415 0.0 20 0.0 0.0 0.0 3.260613792432618 0.0 21 0.0 0.0 0.0 3.3909176389161315 0.0 22 0.0 0.0 0.0 3.546197191870247 0.0 23 0.0 0.0 0.0 3.7108506603634575 0.0 24 0.0 0.0 0.0 3.8330646893269305 0.0 25 0.0 0.0 0.0 3.9338021789217237 0.0 26 0.0 0.0 0.0 4.039547650790828 0.0 27 0.0 0.0 0.0 4.135501875264644 0.0 28 0.0 0.0 0.0 4.242274625548992 0.0 29 0.0 0.0 0.0 4.364809679017228 0.0 30 0.0 0.0 0.0 4.526927053922807 0.0 31 0.0 0.0 0.0 4.679124771631193 0.0 32 0.0 0.0 0.0 4.809653335268041 0.0 33 0.0 0.0 0.0 4.938159444524879 0.0 34 0.0 0.0 0.0 5.0818179104065555 0.0 35 0.0 0.0 0.0 5.251415156273124 0.0 36 0.0 0.0 0.0 5.405025381802469 0.0 37 6.420490095270442E-5 0.0 0.0 5.556324230897517 0.0 38 6.420490095270442E-5 0.0 0.0 5.702422483015396 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGGACT 20 7.858557E-4 44.000004 43 TCCGTCG 20 7.858557E-4 44.000004 1 ACGTCGA 40 8.3200575E-9 44.000004 19 TTACGTA 40 8.3200575E-9 44.000004 40 CGTCGGA 20 7.858557E-4 44.000004 12 GTCGACG 25 4.4445995E-5 44.0 32 CGTTGCA 25 4.4445995E-5 44.0 15 GTTCGAC 25 4.4445995E-5 44.0 15 TTAACGC 30 2.5291174E-6 44.0 21 CGTCGGT 30 2.5291174E-6 44.0 32 CGGTCGA 25 4.4445995E-5 44.0 27 TCGACGA 25 4.4445995E-5 44.0 33 CCGTTCG 25 4.4445995E-5 44.0 26 CGCATCG 65 0.0 43.999996 21 TCCCGTA 35 1.4471516E-7 43.999996 38 TCGTTAG 130 0.0 42.30769 1 CTTGCGG 165 0.0 41.333332 2 CGGTCTA 245 0.0 41.30612 31 CCGACAA 75 0.0 41.06667 40 ACGTCGG 70 0.0 40.85714 2 >>END_MODULE