##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547152_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2855571 Sequences flagged as poor quality 0 Sequence length 50 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.013677824855343 31.0 31.0 33.0 30.0 34.0 2 31.389468165911477 31.0 31.0 34.0 30.0 34.0 3 31.557572198344918 31.0 31.0 34.0 30.0 34.0 4 35.32949662256691 37.0 35.0 37.0 33.0 37.0 5 35.11692197462434 37.0 35.0 37.0 32.0 37.0 6 35.18381612644196 37.0 35.0 37.0 32.0 37.0 7 35.6846784758635 37.0 35.0 37.0 35.0 37.0 8 35.72559673704489 37.0 35.0 37.0 35.0 37.0 9 37.53268085437203 39.0 37.0 39.0 35.0 39.0 10 36.755248600017296 39.0 37.0 39.0 32.0 39.0 11 36.35773440758433 38.0 35.0 39.0 32.0 39.0 12 35.503227550636986 37.0 35.0 39.0 30.0 39.0 13 35.15414080056143 37.0 34.0 39.0 30.0 39.0 14 36.05324434237496 38.0 35.0 40.0 29.0 41.0 15 36.38721572673206 38.0 35.0 40.0 30.0 41.0 16 36.5414762931827 38.0 35.0 40.0 31.0 41.0 17 36.46044311277849 38.0 35.0 40.0 31.0 41.0 18 36.394791444513196 38.0 35.0 40.0 31.0 41.0 19 36.36072540308051 38.0 35.0 40.0 31.0 41.0 20 36.20701393871838 38.0 34.0 40.0 30.0 41.0 21 36.051186610313664 37.0 34.0 40.0 30.0 41.0 22 35.998202110891306 37.0 34.0 40.0 30.0 41.0 23 35.873971965676915 37.0 34.0 40.0 30.0 41.0 24 35.84976279700277 37.0 34.0 40.0 30.0 41.0 25 35.690866380139035 37.0 34.0 40.0 29.0 41.0 26 35.57666995497573 37.0 34.0 40.0 29.0 41.0 27 35.395478872701815 37.0 34.0 40.0 29.0 41.0 28 35.39986048324486 37.0 34.0 40.0 29.0 41.0 29 35.32414602893782 36.0 34.0 40.0 29.0 41.0 30 35.311858468936684 36.0 34.0 40.0 29.0 41.0 31 35.2234845500252 37.0 34.0 40.0 28.0 41.0 32 35.03682661015958 36.0 34.0 40.0 27.0 41.0 33 34.8978298911146 36.0 33.0 40.0 27.0 41.0 34 34.85225231661198 36.0 34.0 40.0 26.0 41.0 35 34.649854617517825 36.0 33.0 40.0 25.0 41.0 36 34.43316870776458 36.0 33.0 40.0 24.0 41.0 37 34.52615781572232 36.0 33.0 40.0 24.0 41.0 38 34.538920236968366 36.0 33.0 40.0 25.0 41.0 39 34.47213604564551 36.0 33.0 40.0 24.0 41.0 40 34.434665431186964 36.0 33.0 40.0 24.0 41.0 41 34.4835845440369 36.0 33.0 40.0 24.0 41.0 42 34.24364023867731 36.0 33.0 40.0 23.0 41.0 43 34.29093305682121 36.0 33.0 40.0 24.0 41.0 44 34.08546311753411 35.0 33.0 40.0 23.0 41.0 45 33.92322796386432 35.0 33.0 40.0 23.0 41.0 46 34.0076114374323 35.0 33.0 40.0 23.0 41.0 47 33.89600888929044 35.0 33.0 40.0 23.0 41.0 48 33.96188117893059 35.0 33.0 40.0 23.0 41.0 49 33.88981293058376 36.0 33.0 40.0 24.0 41.0 50 33.40117335552154 35.0 32.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 3.0 12 8.0 13 7.0 14 23.0 15 83.0 16 257.0 17 659.0 18 1478.0 19 3012.0 20 5335.0 21 8672.0 22 13239.0 23 18935.0 24 26829.0 25 36924.0 26 48456.0 27 58615.0 28 67639.0 29 78790.0 30 93677.0 31 113372.0 32 139336.0 33 175514.0 34 274495.0 35 361162.0 36 211931.0 37 257209.0 38 359135.0 39 500776.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.710921213305504 24.407412738117877 27.80119983008652 13.080466218490102 2 30.30906953460446 26.085956188797265 29.372059038279907 14.23291523831836 3 28.05186773503443 26.951807536916434 30.861498453374125 14.134826274675014 4 25.867786162557334 28.306037566567248 30.47814255012395 15.348033720751472 5 22.957860266825794 32.64383900803027 30.302135719966337 14.0961650051776 6 20.87922170382036 41.359994200809574 27.43629907993883 10.32448501543124 7 88.86019643706985 3.7894697767977057 5.7457160056605145 1.6046177804719266 8 89.80182947648649 3.009590726338095 5.601856861552383 1.586722935623033 9 85.5883464287878 5.068268307809541 6.961514877409806 2.381870385992854 10 46.00144769645021 27.82448764187618 14.194884315606233 11.97918034606739 11 41.668864125598695 23.66412882047058 21.67626019454603 12.990746859384691 12 37.70934079383773 23.436923823641575 23.90225982824451 14.951475554276186 13 22.33119050445603 35.901471194377585 25.409979300111956 16.35735900105443 14 17.253081782942886 38.42590501164215 27.608348733055486 16.712664472359467 15 15.991582769260509 26.667416078955835 41.81149759540211 15.529503556381544 16 18.625451792303537 22.78349934216309 41.21067205122898 17.38037681430439 17 19.27852608112353 22.775479930283645 28.539826185375883 29.40616780321694 18 22.268856211244618 24.916242670905397 34.045625200704166 18.769275917145816 19 28.287757509794016 25.860642232324118 27.157300588918993 18.69429966896288 20 30.33620946563752 25.99714733060393 26.563618974979086 17.10302422877946 21 23.6339772325745 28.933862964710034 29.353989097101767 18.078170705613694 22 23.10774272465997 24.88136348211969 27.503571089634963 24.507322703585377 23 19.839779854887166 30.408384172552527 27.18146388235488 22.570372090205424 24 19.99410975948418 25.30516663742558 36.94980793683645 17.75091566625379 25 18.763147545622225 26.62626844158314 34.95059306877678 19.659990944017853 26 17.947093593540487 34.26060847375184 27.9060124927729 19.88628543993478 27 18.353352096655975 35.07207490200734 28.884976069584685 17.689596931752003 28 16.862546930193645 30.81184113440009 35.551663747810856 16.773948187595405 29 17.221739540007935 27.673344490471436 34.983511178674945 20.121404790845684 30 19.574859108738675 31.70224098787948 30.69354605436181 18.029353849020037 31 27.5473101526805 28.422896856705716 26.242037056686733 17.78775593392705 32 28.78156417753227 26.780423249850905 27.84210233259828 16.595910240018547 33 26.89076895654144 27.42754426347655 26.360087001864073 19.321599778117932 34 19.64909995233878 28.180283382903106 29.082554767505343 23.088061897252775 35 19.9031297068082 27.59973399365661 31.35369423488332 21.143442064651868 36 27.962253433726563 27.455489637624137 26.83193658991494 17.750320338734355 37 20.277835851393643 33.885972367698095 28.014852371031925 17.821339409876344 38 20.02314073087309 34.833558682309075 25.111755232140965 20.031545354676876 39 20.50413034731057 32.72196699013962 26.697462609054373 20.076440053495432 40 23.880127652227873 26.882819583193694 26.9589164478838 22.27813631669463 41 18.71198439821668 26.2199749192018 27.747340199210598 27.320700483370924 42 21.10022829059407 26.551362231931897 26.275410417040934 26.072999060433098 43 21.170406899355683 26.439265561948904 27.609819542221153 24.78050799647426 44 18.5857049255648 30.080498786407343 30.133973205358927 21.19982308266893 45 18.217722480022385 36.2991849966259 25.249906235915688 20.233186287436034 46 21.00872294893035 32.92868571644691 26.479397640611985 19.58319369401076 47 20.513830683950776 29.622832001025362 27.437839927636187 22.425497387387672 48 21.939570054465467 26.996597177937442 31.244188990573164 19.81964377702393 49 21.236033003556905 26.758396131631816 31.86322455298783 20.14234631182345 50 19.715566518920383 33.13666513632475 27.312751110023182 19.835017234731687 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2244.0 1 3768.5 2 5293.0 3 10833.0 4 16373.0 5 13077.5 6 9782.0 7 10169.0 8 10556.0 9 11281.0 10 12006.0 11 12265.0 12 12524.0 13 12813.0 14 13102.0 15 12637.0 16 12172.0 17 12249.0 18 12326.0 19 12351.5 20 12377.0 21 12637.5 22 12898.0 23 15755.0 24 18612.0 25 22361.0 26 26110.0 27 33512.5 28 40915.0 29 44919.0 30 48923.0 31 57854.5 32 66786.0 33 78437.5 34 90089.0 35 99539.0 36 108989.0 37 117988.0 38 126987.0 39 141537.5 40 156088.0 41 196523.5 42 236959.0 43 266618.0 44 296277.0 45 296656.0 46 297035.0 47 263921.5 48 230808.0 49 216724.0 50 202640.0 51 184065.5 52 165491.0 53 149687.0 54 133883.0 55 119337.0 56 104791.0 57 96465.0 58 88139.0 59 83873.5 60 79608.0 61 72944.5 62 66281.0 63 58255.0 64 50229.0 65 41056.5 66 31884.0 67 26333.5 68 20783.0 69 17931.0 70 15079.0 71 12131.5 72 9184.0 73 7402.0 74 5620.0 75 4227.5 76 2835.0 77 2105.5 78 1376.0 79 1084.0 80 792.0 81 602.5 82 413.0 83 297.0 84 181.0 85 133.5 86 86.0 87 52.0 88 18.0 89 15.0 90 12.0 91 8.5 92 5.0 93 5.0 94 5.0 95 5.0 96 5.0 97 2.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2855571.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.786541453191106 #Duplication Level Percentage of deduplicated Percentage of total 1 82.77749782497565 13.895478986303903 2 7.048988109385333 2.366562622024962 3 2.019867243811753 1.0171975565456657 4 0.9604994914912232 0.6449385811874558 5 0.5465669909855985 0.4587484725562838 6 0.3549625061786329 0.35751556945777346 7 0.26168242443986933 0.3074920005801991 8 0.22347363355711913 0.30010795307214555 9 0.18486755289174098 0.27929581559704886 >10 2.558505987268367 10.855837749731348 >50 1.3999601836010405 17.343785853113793 >100 1.6485373542208053 50.20243862806998 >500 0.013321940915339302 1.3965473139016427 >1k 0.0010572968980428017 0.30140261907680777 >5k 2.1145937960856032E-4 0.27265027878093984 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7681 0.26898298098699 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 3432 0.12018612039413484 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.016143881556438276 0.0 2 0.0 0.0 0.0 0.07045876288840305 0.0 3 0.0 0.0 0.0 0.09808896364334839 0.0 4 0.0 0.0 0.0 0.15947773667683277 0.0 5 0.0 0.0 0.0 0.26572618926302305 0.0 6 0.0 0.0 0.0 0.4047526746839774 0.0 7 0.0 0.0 0.0 0.477347612789176 0.0 8 0.0 0.0 0.0 0.6862025143132494 0.0 9 0.0 0.0 0.0 0.758447259759957 0.0 10 0.0 0.0 0.0 0.8899446030233533 0.0 11 0.0 0.0 0.0 1.0451850085324441 0.0 12 0.0 0.0 0.0 1.167647381206771 0.0 13 0.0 0.0 0.0 1.2202112992462804 0.0 14 0.0 0.0 0.0 1.2411178009581971 0.0 15 0.0 0.0 0.0 1.2749814310342835 0.0 16 0.0 0.0 0.0 1.3469460223541982 0.0 17 0.0 0.0 0.0 1.4263346980341234 0.0 18 0.0 0.0 0.0 1.5359800194076771 0.0 19 0.0 0.0 0.0 1.5946372897049312 0.0 20 0.0 0.0 0.0 1.6567614673212467 0.0 21 0.0 0.0 0.0 1.7407726860932542 0.0 22 0.0 0.0 0.0 1.8300367947426277 0.0 23 0.0 0.0 0.0 1.9344292262388152 0.0 24 0.0 0.0 0.0 2.017529944098746 0.0 25 0.0 0.0 0.0 2.0855023391118626 0.0 26 0.0 0.0 0.0 2.1572568148366824 0.0 27 0.0 0.0 0.0 2.2274704428641416 0.0 28 0.0 0.0 0.0 2.3060186561636886 0.0 29 7.003853169821377E-5 0.0 0.0 2.391990953823246 0.0 30 7.003853169821377E-5 0.0 0.0 2.498589599067927 0.0 31 7.003853169821377E-5 0.0 0.0 2.601441182866754 0.0 32 7.003853169821377E-5 0.0 0.0 2.692106062150092 0.0 33 7.003853169821377E-5 0.0 0.0 2.788479081766834 0.0 34 7.003853169821377E-5 0.0 0.0 2.88901939401962 0.0 35 7.003853169821377E-5 0.0 0.0 3.0112016125671537 0.0 36 7.003853169821377E-5 0.0 0.0 3.1132477532514513 0.0 37 7.003853169821377E-5 0.0 0.0 3.225239365436895 0.0 38 7.003853169821377E-5 0.0 0.0 3.339507229902531 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGTATG 20 7.858447E-4 44.000004 27 TACCGTT 20 7.858447E-4 44.000004 40 ACTATCG 35 1.447097E-7 44.0 15 CGTACCA 30 2.5290428E-6 44.0 23 CGACTAT 25 4.4445063E-5 44.0 43 GCGATAT 215 0.0 41.95349 9 ATCGCAA 75 0.0 41.066666 35 TACGGGA 1020 0.0 40.11765 4 ACGGGAT 1000 0.0 39.82 5 ATCGACG 95 0.0 39.368423 1 TATAGCG 120 0.0 38.5 1 TGGGCGA 1240 0.0 38.499996 6 GGGCGAT 4265 0.0 38.429073 7 CGTTTTT 7165 0.0 38.411724 1 CGTAAGG 310 0.0 38.32258 2 TAGGGAC 1980 0.0 38.22222 5 CCGGATA 75 0.0 38.13333 20 CGGTCTA 285 0.0 37.824562 31 CCAACGG 140 0.0 37.714287 2 ACGGTCT 280 0.0 37.714287 30 >>END_MODULE