##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547148_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 5110745 Sequences flagged as poor quality 0 Sequence length 50 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.97647701069022 31.0 31.0 33.0 30.0 34.0 2 31.348786331542662 31.0 31.0 34.0 30.0 34.0 3 31.52129131858467 31.0 31.0 34.0 30.0 34.0 4 35.296303963512166 37.0 35.0 37.0 33.0 37.0 5 35.08082833324691 37.0 35.0 37.0 32.0 37.0 6 35.154548700825416 37.0 35.0 37.0 32.0 37.0 7 35.656977407403424 37.0 35.0 37.0 35.0 37.0 8 35.69607053374801 37.0 35.0 37.0 35.0 37.0 9 37.485043961301145 39.0 37.0 39.0 35.0 39.0 10 36.69381567657944 39.0 37.0 39.0 32.0 39.0 11 36.32988908662044 38.0 35.0 39.0 32.0 39.0 12 35.8636826920537 37.0 35.0 39.0 31.0 39.0 13 35.72611253349561 37.0 35.0 39.0 30.0 39.0 14 36.67720733474278 38.0 35.0 40.0 31.0 41.0 15 36.85384929203081 38.0 35.0 41.0 31.0 41.0 16 36.89621356573259 38.0 35.0 41.0 31.0 41.0 17 36.78431911590189 38.0 35.0 40.0 31.0 41.0 18 36.7031415185066 38.0 35.0 40.0 31.0 41.0 19 36.70618588875008 38.0 35.0 40.0 31.0 41.0 20 36.57085669506109 38.0 35.0 40.0 31.0 41.0 21 36.45371741301904 38.0 35.0 40.0 30.0 41.0 22 36.404008417559474 38.0 35.0 40.0 30.0 41.0 23 36.2011739971374 38.0 34.0 40.0 30.0 41.0 24 36.19740644465728 38.0 34.0 40.0 30.0 41.0 25 36.0511113350402 38.0 34.0 40.0 30.0 41.0 26 35.928604733752124 38.0 34.0 40.0 30.0 41.0 27 35.74583862039683 38.0 34.0 40.0 29.0 41.0 28 35.69478696354445 38.0 34.0 40.0 29.0 41.0 29 35.56618927377515 38.0 34.0 40.0 29.0 41.0 30 35.56451261019675 38.0 34.0 40.0 29.0 41.0 31 35.52544472479061 38.0 34.0 40.0 28.0 41.0 32 35.3633564186826 38.0 34.0 40.0 27.0 41.0 33 35.20559350936116 38.0 34.0 40.0 27.0 41.0 34 35.1135673957515 38.0 34.0 40.0 26.0 41.0 35 34.93881576952088 38.0 33.0 40.0 25.0 41.0 36 34.77135955716828 37.0 33.0 40.0 24.0 41.0 37 34.88511987978269 38.0 33.0 40.0 25.0 41.0 38 34.84687203137703 38.0 33.0 40.0 25.0 41.0 39 34.770818344487935 38.0 33.0 40.0 24.0 41.0 40 34.77305617869802 38.0 33.0 40.0 24.0 41.0 41 34.796434375027516 37.0 33.0 40.0 24.0 41.0 42 34.57017205906379 37.0 33.0 40.0 24.0 41.0 43 34.633142917519855 37.0 33.0 40.0 24.0 41.0 44 34.45094110545527 37.0 33.0 40.0 23.0 41.0 45 34.194734427172556 37.0 33.0 40.0 23.0 41.0 46 34.30463953885393 37.0 33.0 40.0 23.0 41.0 47 34.1795025969795 37.0 33.0 40.0 23.0 41.0 48 34.25687976997483 37.0 33.0 40.0 23.0 41.0 49 34.179406720546616 36.0 33.0 40.0 24.0 41.0 50 33.69588210720746 36.0 32.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 2.0 10 0.0 11 2.0 12 6.0 13 22.0 14 56.0 15 128.0 16 455.0 17 1188.0 18 2596.0 19 5289.0 20 9501.0 21 15006.0 22 23168.0 23 32438.0 24 45894.0 25 63236.0 26 82433.0 27 100756.0 28 115271.0 29 134250.0 30 159987.0 31 193201.0 32 234248.0 33 291761.0 34 417137.0 35 511951.0 36 427642.0 37 524614.0 38 724402.0 39 994104.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.95385604251435 23.3528966911869 29.050383065482627 13.642864200816124 2 31.24746000827668 25.585369647673676 29.674284277536838 13.492886066512808 3 29.35055456689778 25.705039089213024 31.0978732063525 13.8465331375367 4 25.881021260109826 27.48530791499087 31.404501692023373 15.229169132875931 5 23.21238880045864 31.939687853727783 30.234222212221507 14.61370113359207 6 20.915287301557797 41.555350540870265 27.37150845913854 10.1578536984334 7 88.2592263945863 3.7116702163774558 6.481990394746755 1.5471129942894823 8 89.06916701968109 3.1098401505064333 6.077411414578501 1.7435814152339826 9 83.94079532436074 5.353368246703758 7.727366558104542 2.9784698708309647 10 39.87330614225519 32.03129876368318 15.977944507111976 12.117450586949651 11 31.903685274847405 25.044978765326775 26.647954456737715 16.403381503088102 12 30.114650603776944 23.719438164103277 28.593972111698 17.571939120421778 13 22.93227308347413 28.616551989974067 30.0643448264392 18.386830100112604 14 19.00000880497853 32.57495727139585 30.06864948260968 18.356384441015937 15 18.387847564298358 26.93898834710008 37.60614157035814 17.067022518243427 16 21.86442485391073 25.104324320622535 35.879778779806074 17.15147204566066 17 21.572099566697222 25.059223263927276 29.564222045905247 23.80445512347026 18 22.451893021467516 26.790555975694346 32.41302393290998 18.34452706992816 19 26.05858832714213 27.344839157500523 28.246253726217997 18.35031878913935 20 28.28186497271924 26.682333006244686 27.907672951790786 17.128129069245286 21 24.694677586144486 27.68068060527379 30.000146749642177 17.624495058939548 22 24.047550797388638 24.986161508742853 29.355583187969657 21.610704505898845 23 21.832961730628313 28.226530574309617 29.73877585361821 20.20173184144386 24 20.758030385002577 26.326494473897643 33.75006970608003 19.165405435019746 25 20.697843465091683 28.007658374659663 31.80414988421453 19.49034827603412 26 19.907841224713813 31.624547888810735 28.98919824800494 19.478412638470516 27 20.11767364640576 31.034457794313745 30.129110335185967 18.718758224094532 28 18.776225383970438 29.281738768026973 33.240907147588075 18.701128700414518 29 20.09965279034661 27.345621822258792 33.09133991228285 19.46338547511175 30 20.953990073854204 29.293615705733707 30.73749521840749 19.0148990020046 31 24.47198989579797 27.917162761984798 28.637918737874813 18.97292860434242 32 25.590672201410946 27.724431565261032 28.85549954067362 17.8293966926544 33 25.15885648765493 27.863511092805453 28.128364847003716 18.8492675725359 34 21.217885063723585 27.957274330846086 30.011573655112905 20.81326695031742 35 20.76417430335499 27.669547199087415 30.835113080382605 20.731165417174992 36 24.017966069526068 28.754320554048384 28.76459302900066 18.463120347424887 37 21.623559774553417 31.232198045490435 28.659481151965128 18.484761027991027 38 21.382009863532616 31.497188766021395 26.963113988273722 20.157687382172266 39 21.16393989525989 30.324815657991156 27.96116808801848 20.55007635873048 40 23.134533223629823 27.26518345172768 28.650030475009025 20.95025284963347 41 19.73136988834309 27.92847226774179 29.120764193869974 23.21939365004515 42 21.458711009842986 28.099230151377146 27.78804264348935 22.65401619529051 43 21.081623129308934 27.76051241061724 28.47261994092838 22.68524451914545 44 20.789552208141863 28.88066221265197 29.89065194996033 20.439133629245834 45 20.505053568511048 31.3916464233688 27.107730868982898 20.99556913913725 46 20.872847305040654 30.68699377488018 28.371108321780873 20.06905059829829 47 20.92763383811949 28.55086685013633 28.84062891026651 21.68087040147767 48 21.031884783920933 27.726055594634442 30.459512262889266 20.782547358555355 49 21.346065984509107 27.618771822894704 30.390187731925582 20.644974460670607 50 20.461185208810065 30.841707030971023 28.466221656529527 20.230886103689382 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 3769.0 1 5813.5 2 7858.0 3 23822.5 4 39787.0 5 29585.0 6 19383.0 7 19858.0 8 20333.0 9 21237.5 10 22142.0 11 22395.0 12 22648.0 13 22398.0 14 22148.0 15 21580.5 16 21013.0 17 21685.5 18 22358.0 19 22331.0 20 22304.0 21 24381.0 22 26458.0 23 30807.0 24 35156.0 25 43551.0 26 51946.0 27 65813.5 28 79681.0 29 93791.5 30 107902.0 31 124629.0 32 141356.0 33 167589.0 34 193822.0 35 206890.0 36 219958.0 37 237793.5 38 255629.0 39 276561.0 40 297493.0 41 332188.0 42 366883.0 43 397991.5 44 429100.0 45 432471.5 46 435843.0 47 413754.5 48 391666.0 49 377490.0 50 363314.0 51 328358.0 52 293402.0 53 270308.0 54 247214.0 55 227729.0 56 208244.0 57 196054.0 58 183864.0 59 175337.0 60 166810.0 61 152601.5 62 138393.0 63 116450.0 64 94507.0 65 78766.0 66 63025.0 67 50489.0 68 37953.0 69 30407.0 70 22861.0 71 19025.5 72 15190.0 73 11763.5 74 8337.0 75 6892.5 76 5448.0 77 4064.5 78 2681.0 79 2055.5 80 1430.0 81 1061.5 82 693.0 83 591.5 84 490.0 85 342.5 86 195.0 87 116.5 88 38.0 89 27.0 90 16.0 91 9.5 92 3.0 93 2.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 5110745.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.28930250829511 #Duplication Level Percentage of deduplicated Percentage of total 1 81.06295696059169 14.015219851085762 2 7.273030012252912 2.514912320674997 3 2.264876842206692 1.1747442260683096 4 1.0831764841832805 0.7490946361966507 5 0.6860779304791146 0.5930904442159235 6 0.47999278429329845 0.49792442696674055 7 0.38814180886790484 0.4697490804743847 8 0.2778781930801751 0.3843456112497266 9 0.25425864751413146 0.3956359204999615 >10 3.2156476073145304 13.825106514229876 >50 1.4966227482813144 18.86431799837099 >100 1.5080092901156603 44.87783203576519 >500 0.007833172539811636 0.876073350456623 >1k 0.0013823245658489776 0.37247257889057234 >5k 0.0 0.0 >10k+ 1.1519371382074814E-4 0.3894810048542419 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 19556 0.3826448003177619 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.01577069487912232 0.0 2 0.0 0.0 0.0 0.06591993926521476 0.0 3 0.0 0.0 0.0 0.09521116784343574 0.0 4 0.0 0.0 0.0 0.15766781555330975 0.0 5 0.0 0.0 0.0 0.2890185286098211 0.0 6 0.0 0.0 0.0 0.45848501539403747 0.0 7 0.0 0.0 0.0 0.5578247398373427 0.0 8 0.0 0.0 0.0 0.782429958841617 0.0 9 1.9566618956727443E-5 0.0 0.0 0.8723385729477796 0.0 10 1.9566618956727443E-5 0.0 0.0 1.0435660554381014 0.0 11 1.9566618956727443E-5 0.0 0.0 1.1911766288476533 0.0 12 1.9566618956727443E-5 0.0 0.0 1.3292191255873655 0.0 13 1.9566618956727443E-5 0.0 0.0 1.3835556264301976 0.0 14 1.9566618956727443E-5 0.0 0.0 1.4072703686057513 0.0 15 1.9566618956727443E-5 0.0 0.0 1.4396139897412217 0.0 16 1.9566618956727443E-5 0.0 0.0 1.5069818588092343 0.0 17 3.913323791345489E-5 0.0 0.0 1.5835460387869087 0.0 18 3.913323791345489E-5 0.0 0.0 1.6898319129598522 0.0 19 3.913323791345489E-5 0.0 0.0 1.7551452870374085 0.0 20 3.913323791345489E-5 0.0 0.0 1.8187367986467726 0.0 21 3.913323791345489E-5 0.0 0.0 1.9096433103197283 0.0 22 3.913323791345489E-5 0.0 0.0 2.008161236766851 0.0 23 3.913323791345489E-5 0.0 0.0 2.116051573694246 0.0 24 3.913323791345489E-5 0.0 0.0 2.1981726734556313 0.0 25 3.913323791345489E-5 0.0 0.0 2.2755195181915746 0.0 26 3.913323791345489E-5 0.0 0.0 2.350244435987317 0.0 27 3.913323791345489E-5 0.0 0.0 2.4300958079497215 0.0 28 3.913323791345489E-5 0.0 0.0 2.5166976634521974 0.0 29 3.913323791345489E-5 0.0 0.0 2.612867595624513 0.0 30 5.8699856870182334E-5 0.0 0.0 2.7298172771288725 0.0 31 5.8699856870182334E-5 0.0 0.0 2.836905382679042 0.0 32 5.8699856870182334E-5 0.0 0.0 2.942858624329721 0.0 33 5.8699856870182334E-5 0.0 0.0 3.0530969555319234 0.0 34 5.8699856870182334E-5 0.0 0.0 3.1725707308817013 0.0 35 5.8699856870182334E-5 0.0 0.0 3.2995385212919057 0.0 36 5.8699856870182334E-5 0.0 0.0 3.4189927300227265 0.0 37 7.826647582690977E-5 0.0 0.0 3.5441408248699555 0.0 38 7.826647582690977E-5 0.0 0.0 3.685705313021878 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 16145 0.0 39.83029 1 TATCGCG 225 0.0 38.13333 1 CGACGGT 770 0.0 37.142853 28 AGGGCGA 3930 0.0 37.114506 6 CGTAAGG 730 0.0 37.068493 2 GGGCGAT 8015 0.0 36.945724 7 CTCACGA 770 0.0 36.85714 24 TGGGCGA 2470 0.0 36.696354 6 TGTAGCG 420 0.0 36.666664 1 TCGATAG 265 0.0 36.5283 1 GACCGAT 2585 0.0 36.51064 9 CGGTCTA 750 0.0 36.08 31 TACGGGA 1855 0.0 35.81671 4 CGACCCG 510 0.0 35.80392 32 GCGCGAC 560 0.0 35.75 9 CACGACG 770 0.0 35.714283 26 TAAGGGA 6435 0.0 35.65812 4 TATAGCG 235 0.0 35.57447 1 TAGGGAC 5400 0.0 35.566666 5 GGACCGA 2820 0.0 35.418438 8 >>END_MODULE