##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547146_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3483166 Sequences flagged as poor quality 0 Sequence length 50 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.06514791428258 31.0 31.0 33.0 30.0 34.0 2 31.446828833308548 31.0 31.0 34.0 30.0 34.0 3 31.605891881121945 31.0 31.0 34.0 30.0 34.0 4 35.38010735061148 37.0 35.0 37.0 33.0 37.0 5 35.19798970247183 37.0 35.0 37.0 32.0 37.0 6 35.25546098003942 37.0 35.0 37.0 32.0 37.0 7 35.71357494876787 37.0 35.0 37.0 35.0 37.0 8 35.74388961077365 37.0 35.0 37.0 35.0 37.0 9 37.53969807927615 39.0 37.0 39.0 35.0 39.0 10 36.80282076708374 39.0 37.0 39.0 32.0 39.0 11 36.48546724445519 38.0 35.0 39.0 32.0 39.0 12 36.0358771301741 38.0 35.0 39.0 31.0 39.0 13 35.91349651437801 38.0 35.0 39.0 31.0 39.0 14 36.870026579267254 39.0 35.0 41.0 31.0 41.0 15 37.02772850906331 39.0 35.0 41.0 31.0 41.0 16 37.06704647438566 39.0 35.0 41.0 32.0 41.0 17 36.95409033046372 38.0 35.0 41.0 31.0 41.0 18 36.86678183009366 38.0 35.0 40.0 31.0 41.0 19 36.844042173126404 38.0 35.0 40.0 31.0 41.0 20 36.71497310205715 38.0 35.0 40.0 31.0 41.0 21 36.609875038973165 38.0 35.0 40.0 31.0 41.0 22 36.558931730500355 38.0 35.0 40.0 30.0 41.0 23 36.365676513838274 38.0 35.0 40.0 30.0 41.0 24 36.34892422583362 38.0 35.0 40.0 30.0 41.0 25 36.21293013310304 38.0 35.0 40.0 30.0 41.0 26 36.09508303652482 38.0 34.0 40.0 30.0 41.0 27 35.90893342436163 38.0 34.0 40.0 29.0 41.0 28 35.856592536789805 38.0 34.0 40.0 29.0 41.0 29 35.73604674597765 38.0 34.0 40.0 29.0 41.0 30 35.71862954564899 38.0 34.0 40.0 29.0 41.0 31 35.662764565340844 38.0 34.0 40.0 29.0 41.0 32 35.50004191588916 38.0 34.0 40.0 27.0 41.0 33 35.32828122461002 38.0 34.0 40.0 27.0 41.0 34 35.24959792326866 38.0 34.0 40.0 26.0 41.0 35 35.05409819687032 38.0 34.0 40.0 25.0 41.0 36 34.88655866530622 38.0 33.0 40.0 25.0 41.0 37 34.99072280792819 38.0 34.0 40.0 25.0 41.0 38 34.943807444147076 38.0 34.0 40.0 25.0 41.0 39 34.8710067220454 38.0 34.0 40.0 24.0 41.0 40 34.872840111553685 38.0 34.0 40.0 24.0 41.0 41 34.8935924960223 38.0 34.0 40.0 25.0 41.0 42 34.65979772425431 37.0 33.0 40.0 24.0 41.0 43 34.71525014885883 37.0 33.0 40.0 24.0 41.0 44 34.54197129852554 37.0 33.0 40.0 24.0 41.0 45 34.35882785948186 37.0 33.0 40.0 23.0 41.0 46 34.42803960534755 37.0 33.0 40.0 23.0 41.0 47 34.29979995211253 37.0 33.0 40.0 23.0 41.0 48 34.33429098699287 37.0 33.0 40.0 23.0 41.0 49 34.2564477260056 37.0 33.0 40.0 24.0 41.0 50 33.77771716880562 36.0 32.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 2.0 11 6.0 12 9.0 13 11.0 14 40.0 15 78.0 16 295.0 17 694.0 18 1688.0 19 3334.0 20 5791.0 21 9458.0 22 14480.0 23 21276.0 24 30128.0 25 41489.0 26 54600.0 27 65791.0 28 74283.0 29 86624.0 30 103131.0 31 125633.0 32 153584.0 33 193109.0 34 279569.0 35 346627.0 36 292770.0 37 365412.0 38 511535.0 39 701717.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.12154344639331 23.450906445457953 28.213326611479328 14.214223496669408 2 31.75418570346633 25.491291543383234 29.200417091806706 13.554105661343732 3 28.980588349794413 25.37074029776359 31.961985159478473 13.68668619296353 4 26.07308982689886 27.705283067186574 31.260410787197625 14.961216318716938 5 23.476228236035837 31.92627052514867 30.123083424677432 14.474417814138057 6 21.581802302847468 40.78812207055306 27.450715814290795 10.179359812308688 7 88.12675020369399 3.7918089462288043 6.636146540245283 1.4452943098319173 8 88.72623354729576 3.161462876015671 6.586651339614592 1.5256522370739722 9 83.52903651448138 5.761511222835777 7.880043615492342 2.8294086471905158 10 37.76050294473477 34.10750449447428 15.95531192024727 12.17668064054369 11 31.966980614762548 26.451739595528895 26.73688247990478 14.844397309803782 12 29.669099893602546 25.12251784726883 28.48612440521066 16.722257853917956 13 23.14354239792189 29.725743763001823 29.504364707280672 17.626349131795614 14 19.420464026118765 32.454209762038325 30.282105417887063 17.843220793955844 15 19.00710445611837 27.247509880378946 36.961804289545775 16.783581373956913 16 22.606932888067924 26.037059387924664 34.96781376483349 16.388193959173925 17 22.495511267622618 25.53470032723103 29.535686786102065 22.434101619044284 18 23.079376636083378 26.271903205302305 32.23871615650819 18.41000400210613 19 26.364405256597017 26.897741881954524 28.875798626881405 17.862054234567058 20 28.14729473128757 26.966616003945838 28.244160628577564 16.64192863618903 21 25.263251880616654 27.624810301892015 30.036036180876824 17.075901636614503 22 24.28451586860919 25.2243791998429 30.057970248905736 20.43313468264217 23 21.457576239547585 28.732021385142136 30.0604966860609 19.749905689249378 24 20.65419793371892 27.151505268482758 34.018131780110394 18.176165017687932 25 20.843049111067344 28.22544202601886 32.330471760461606 18.601037102452196 26 20.468389964761943 31.62634224151246 29.260965454991233 18.64430233873436 27 19.68809410748727 31.026686640831937 30.718576145954575 18.56664310572623 28 18.69543398161328 29.533791958235696 33.57732591556073 18.193448144590295 29 19.786137094815466 28.0004168621306 33.39806371559667 18.81538232745726 30 21.050073410225064 29.25852514637545 31.339448076835847 18.351953366563638 31 24.627766807553815 28.037940195787396 28.909360047726697 18.424932948932092 32 24.870276064936327 28.19578509895882 29.326394435407327 17.607544400697524 33 24.157591111075384 28.36023319014942 28.705953147222957 18.776222551552237 34 21.33909207887307 28.62817907616232 30.049242556915175 19.983486288049434 35 20.48179730739218 29.109407935194593 30.73827087195959 19.670523885453637 36 24.232207135692068 29.4768035746789 28.387277551514916 17.90371173811412 37 21.69764518831431 31.799144801022976 28.371803123939543 18.13140688672317 38 21.035316720477866 32.020294180639105 27.405440912089745 19.538948186793277 39 21.48433350578181 30.744615674360627 28.146347317354387 19.62470350250318 40 22.90953115642493 28.220503989761035 28.588100595837236 20.281864257976796 41 19.744479591268405 28.5887034956129 28.66007534524625 23.006741567872446 42 21.404808154420433 28.400857151223914 27.9573238829272 22.237010811428455 43 21.017516822339218 28.39942167556757 28.43453341012171 22.1485280919715 44 20.396731019997326 29.876497416430915 30.134710777493805 19.59206078607795 45 19.892161326792923 31.971688974915352 27.826063988911237 20.310085709380488 46 20.842618468370443 31.19862791494864 28.350070022502514 19.6086835941784 47 20.983811853928295 29.635050411034097 28.750998373318986 20.63013936171862 48 21.07746228574808 28.17729617250513 31.063520946173682 19.681720595573108 49 21.302889382820112 28.513168766576154 30.65294619894659 19.530995651657143 50 20.22656973569448 31.273789420314735 28.75340997242164 19.746230871569143 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2618.0 1 4191.0 2 5764.0 3 17610.5 4 29457.0 5 22411.5 6 15366.0 7 15598.5 8 15831.0 9 16449.0 10 17067.0 11 16913.5 12 16760.0 13 17075.5 14 17391.0 15 16999.0 16 16607.0 17 17141.5 18 17676.0 19 19141.5 20 20607.0 21 21598.5 22 22590.0 23 26703.5 24 30817.0 25 36996.5 26 43176.0 27 53276.0 28 63376.0 29 72099.0 30 80822.0 31 92953.0 32 105084.0 33 118746.5 34 132409.0 35 145692.0 36 158975.0 37 168765.0 38 178555.0 39 195196.0 40 211837.0 41 234512.5 42 257188.0 43 268644.5 44 280101.0 45 273714.5 46 267328.0 47 256072.0 48 244816.0 49 236391.0 50 227966.0 51 215273.0 52 202580.0 53 183618.0 54 164656.0 55 150272.0 56 135888.0 57 128765.0 58 121642.0 59 115822.0 60 110002.0 61 99014.0 62 88026.0 63 76431.0 64 64836.0 65 53582.5 66 42329.0 67 34312.0 68 26295.0 69 22433.5 70 18572.0 71 15422.5 72 12273.0 73 9930.5 74 7588.0 75 6184.0 76 4780.0 77 3259.5 78 1739.0 79 1307.5 80 876.0 81 653.5 82 431.0 83 372.5 84 314.0 85 190.0 86 66.0 87 53.5 88 41.0 89 30.0 90 19.0 91 16.0 92 13.0 93 8.0 94 3.0 95 7.0 96 11.0 97 6.5 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 3483166.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.604253957496486 #Duplication Level Percentage of deduplicated Percentage of total 1 80.72833523641609 14.21162115067781 2 5.840039779519913 2.0561908680110066 3 1.8897974388954848 0.998054221276277 4 1.0013291489369778 0.7051061053172153 5 0.720423164949893 0.6341256176320648 6 0.5283364280067323 0.5580581192176245 7 0.4161193454007819 0.5127829443143792 8 0.33464569247973064 0.47129502049563604 9 0.31563393489713865 0.5000849952779827 >10 4.9377602058355 22.01476836455386 >50 2.110665910022633 26.36117475377489 >100 1.1732691258470214 30.08129382681142 >500 0.0029819362845529404 0.33523739334597674 >1k 4.969893807588233E-4 0.15897164255145013 >5k 0.0 0.0 >10k+ 1.656631269196078E-4 0.4012349767424052 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13758 0.39498548159921176 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.007493182926108029 0.0 2 0.0 0.0 0.0 0.0312646597951404 0.0 3 0.0 0.0 0.0 0.04630844467361016 0.0 4 0.0 0.0 0.0 0.0687018649125537 0.0 5 0.0 0.0 0.0 0.11745061820194616 0.0 6 0.0 0.0 0.0 0.20197142484739458 0.0 7 0.0 0.0 0.0 0.2467295558121548 0.0 8 2.8709513126850688E-5 0.0 0.0 0.3580650477180818 0.0 9 2.8709513126850688E-5 0.0 0.0 0.41290021779036656 0.0 10 2.8709513126850688E-5 0.0 0.0 0.5010958421160518 0.0 11 2.8709513126850688E-5 0.0 0.0 0.5904398469668112 0.0 12 2.8709513126850688E-5 0.0 0.0 0.6607494446144686 0.0 13 2.8709513126850688E-5 0.0 0.0 0.6956027935504653 0.0 14 2.8709513126850688E-5 0.0 0.0 0.7155271956604997 0.0 15 2.8709513126850688E-5 0.0 0.0 0.736427721216847 0.0 16 2.8709513126850688E-5 0.0 0.0 0.7748697592937001 0.0 17 2.8709513126850688E-5 0.0 0.0 0.8183072526546251 0.0 18 2.8709513126850688E-5 0.0 0.0 0.8740324176338423 0.0 19 2.8709513126850688E-5 0.0 0.0 0.9103499517393084 0.0 20 2.8709513126850688E-5 0.0 0.0 0.9458636194772228 0.0 21 2.8709513126850688E-5 2.8709513126850688E-5 0.0 0.9976268716449346 0.0 22 2.8709513126850688E-5 2.8709513126850688E-5 0.0 1.0526917178222341 0.0 23 2.8709513126850688E-5 2.8709513126850688E-5 0.0 1.1107136438515994 0.0 24 2.8709513126850688E-5 2.8709513126850688E-5 0.0 1.1603236825347973 0.0 25 2.8709513126850688E-5 2.8709513126850688E-5 0.0 1.2063163225640121 0.0 26 2.8709513126850688E-5 2.8709513126850688E-5 0.0 1.2512467106075336 0.0 27 2.8709513126850688E-5 2.8709513126850688E-5 0.0 1.2976412838205242 0.0 28 2.8709513126850688E-5 2.8709513126850688E-5 0.0 1.3486006696206843 0.0 29 2.8709513126850688E-5 2.8709513126850688E-5 0.0 1.4069384002944447 0.0 30 2.8709513126850688E-5 2.8709513126850688E-5 0.0 1.4761857459564087 0.0 31 2.8709513126850688E-5 2.8709513126850688E-5 0.0 1.5394328033748608 0.0 32 2.8709513126850688E-5 2.8709513126850688E-5 0.0 1.6046321076859387 0.0 33 2.8709513126850688E-5 2.8709513126850688E-5 0.0 1.6725875252571942 0.0 34 2.8709513126850688E-5 2.8709513126850688E-5 0.0 1.7410310045516062 0.0 35 2.8709513126850688E-5 2.8709513126850688E-5 0.0 1.8186902375597374 0.0 36 2.8709513126850688E-5 2.8709513126850688E-5 0.0 1.8915262723625574 0.0 37 2.8709513126850688E-5 2.8709513126850688E-5 0.0 1.9701616288170016 0.0 38 2.8709513126850688E-5 2.8709513126850688E-5 0.0 2.0582137055770526 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTCGGT 20 7.858685E-4 44.000004 16 CGCAATA 20 7.858685E-4 44.000004 40 CGTTTTT 12310 0.0 40.246952 1 TAACGCG 40 4.12776E-7 38.500004 1 GCGATCG 115 0.0 38.260868 9 CGTAAGG 665 0.0 38.04511 2 TCGAACG 35 7.2944695E-6 37.714283 1 TACGGGA 1250 0.0 37.312 4 CGCATCG 65 1.0913936E-11 37.23077 21 GACCGAT 1660 0.0 36.710842 9 GCGATAC 250 0.0 36.08 9 TAAGGGA 4230 0.0 36.042553 4 GGGCGAT 5630 0.0 35.950264 7 ATAGGGA 4715 0.0 35.88123 4 ACGGGAT 1555 0.0 35.794212 5 AGGGCGA 2805 0.0 35.764706 6 CGGGATT 1520 0.0 35.605263 6 GTAGGGC 1545 0.0 35.598705 4 TAGCACG 130 0.0 35.538464 1 TAGGGAC 2990 0.0 35.538464 5 >>END_MODULE