##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547144_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1776145 Sequences flagged as poor quality 0 Sequence length 50 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.103938023078072 31.0 31.0 33.0 30.0 34.0 2 31.477017360632157 31.0 31.0 34.0 30.0 34.0 3 31.636671555531784 31.0 31.0 34.0 30.0 34.0 4 35.402077533084295 37.0 35.0 37.0 33.0 37.0 5 35.20059848717306 37.0 35.0 37.0 32.0 37.0 6 35.2744826576659 37.0 35.0 37.0 32.0 37.0 7 35.717392442621524 37.0 35.0 37.0 35.0 37.0 8 35.75860923516942 37.0 35.0 37.0 35.0 37.0 9 37.55508362211418 39.0 37.0 39.0 35.0 39.0 10 36.87660748418626 39.0 37.0 39.0 32.0 39.0 11 36.5092596606696 38.0 35.0 39.0 32.0 39.0 12 35.84493157934741 37.0 35.0 39.0 31.0 39.0 13 35.5850547111863 37.0 35.0 39.0 30.0 39.0 14 36.521330184191044 38.0 35.0 40.0 31.0 41.0 15 36.77366206024846 38.0 35.0 40.0 31.0 41.0 16 36.87207407052915 38.0 35.0 40.0 32.0 41.0 17 36.78034507317815 38.0 35.0 40.0 31.0 41.0 18 36.71829214394095 38.0 35.0 40.0 31.0 41.0 19 36.69055848480839 38.0 35.0 40.0 31.0 41.0 20 36.54120806578292 38.0 35.0 40.0 31.0 41.0 21 36.41182110694791 38.0 35.0 40.0 31.0 41.0 22 36.339270723955536 38.0 35.0 40.0 30.0 41.0 23 36.20230724405947 38.0 34.0 40.0 30.0 41.0 24 36.15662516292307 38.0 34.0 40.0 30.0 41.0 25 36.00730120570111 38.0 34.0 40.0 30.0 41.0 26 35.90197253039589 38.0 34.0 40.0 30.0 41.0 27 35.71615887216415 37.0 34.0 40.0 29.0 41.0 28 35.670851760413704 37.0 34.0 40.0 29.0 41.0 29 35.593128376343145 37.0 34.0 40.0 29.0 41.0 30 35.597900509248966 37.0 34.0 40.0 29.0 41.0 31 35.51719144551824 37.0 34.0 40.0 29.0 41.0 32 35.363273831809906 37.0 34.0 40.0 28.0 41.0 33 35.16941634832742 37.0 34.0 40.0 27.0 41.0 34 35.076657592707804 37.0 34.0 40.0 27.0 41.0 35 34.86986760652987 37.0 34.0 40.0 26.0 41.0 36 34.6794270738031 37.0 33.0 40.0 25.0 41.0 37 34.78262698146829 37.0 33.0 40.0 25.0 41.0 38 34.76983129192718 37.0 33.0 40.0 25.0 41.0 39 34.71013627828809 37.0 33.0 40.0 25.0 41.0 40 34.65069687441059 37.0 33.0 40.0 24.0 41.0 41 34.687401084933946 37.0 34.0 40.0 24.0 41.0 42 34.476305707022796 37.0 33.0 40.0 24.0 41.0 43 34.52067877341096 37.0 33.0 40.0 24.0 41.0 44 34.325940168173204 36.0 33.0 40.0 23.0 41.0 45 34.08959966669388 36.0 33.0 40.0 23.0 41.0 46 34.195429427214556 36.0 33.0 40.0 23.0 41.0 47 34.0757539502687 36.0 33.0 40.0 23.0 41.0 48 34.14694633602549 36.0 33.0 40.0 23.0 41.0 49 34.08782334775596 36.0 33.0 40.0 24.0 41.0 50 33.60483744288895 35.0 32.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 0.0 10 1.0 11 3.0 12 6.0 13 19.0 14 12.0 15 59.0 16 140.0 17 373.0 18 845.0 19 1572.0 20 3009.0 21 4860.0 22 7382.0 23 10912.0 24 15179.0 25 21324.0 26 27873.0 27 33962.0 28 39051.0 29 44843.0 30 53658.0 31 65900.0 32 81638.0 33 103863.0 34 159910.0 35 208105.0 36 142765.0 37 174923.0 38 242007.0 39 331949.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.54450227881169 24.17584149942713 29.24885074135276 13.030805480408414 2 31.014979069839455 25.77272688885198 29.787545498819075 13.424748542489493 3 29.476985268657685 25.667442691897342 31.27227788271791 13.583294156727069 4 26.423574651844305 28.45218155049278 30.764999479209187 14.35924431845373 5 23.43451688910534 31.89429917039431 29.927680454016986 14.743503486483366 6 21.81651835857996 40.58170926360179 27.166081598067727 10.435690779750527 7 87.61368018939895 4.203654543970227 6.505718846152764 1.676946420478058 8 88.19127942819985 3.4807405926880968 6.458763220345186 1.8692167587668798 9 83.04023601676664 6.177367275757328 7.987298334313922 2.795098373162101 10 44.371095828324826 30.302537236543188 14.582536898732931 10.743830036399055 11 37.13187830948487 23.876260102638017 24.631772743779365 14.360088844097751 12 34.38964724163849 23.684946893412416 26.592310875519736 15.333094989429355 13 22.412978670097317 33.34018337466817 26.985015299989584 17.261822655244927 14 17.615904106928205 35.712343305304465 29.551641335589157 17.120111252178173 15 17.0494526066284 26.303595708683698 40.52473193348516 16.122219751202746 16 19.918869236464364 24.038972043386096 38.75246671865191 17.289692001497624 17 20.08287611653328 23.560745322031703 29.55068420652593 26.805694354909086 18 22.222678891644545 25.6819685329745 33.44681881265325 18.648533762727705 19 27.959992005157236 26.16385486545299 27.778193784854277 18.097959344535496 20 29.435997624067856 25.633380157588487 27.259317229167664 17.671304989175994 21 24.624228314692775 27.645997370710162 29.959547221651384 17.770227092945678 22 23.74744179106999 25.24906468784925 28.67547413077198 22.328019390308786 23 20.71536952219554 29.477886096011307 28.23722162323459 21.569522758558563 24 20.68620523662201 26.04545237016122 35.54388859017704 17.72445380303973 25 19.370265378108208 27.749874024924765 33.38832133637738 19.491539260589647 26 19.267739964924036 33.06194032581799 27.986679015508305 19.683640693749666 27 18.802913050454777 33.341365710569804 29.936407219005208 17.919314019970216 28 17.41389357287834 29.883596215399084 35.30021479102213 17.40229542070045 29 18.20932412612709 27.418031748534045 34.51959158739855 19.853052537940314 30 19.760942941032404 30.877715501831215 31.243282502273185 18.1180590548632 31 26.100853252409014 28.329500125271306 27.706127596564468 17.863519025755217 32 27.504173364224204 27.2406813632896 28.38715307590315 16.86799219658305 33 26.339516199409395 27.70685951878929 27.076392974672675 18.877231307128643 34 21.297585501183743 28.17664098370347 29.190465868496098 21.335307646616688 35 21.07063330978045 27.35401670471724 31.416297655878324 20.15905232962399 36 26.39086335856588 27.929194970005266 27.256727350526 18.423214320902854 37 20.8652446731545 32.4361468235983 28.46862164969639 18.22998685355081 38 21.052841969546403 32.971238271650115 25.887863884986867 20.088055873816607 39 21.533714871252066 31.71295136376816 27.463242021343977 19.290091743635795 40 23.88318521291899 27.24006204448398 27.80251612340209 21.07423661919494 41 18.780899082000623 26.584372334465932 29.07656750997244 25.558161073561 42 21.464688975280737 27.25712146249321 26.98405817092636 24.294131391299697 43 21.571493318394612 27.47697963848672 27.218667394835443 23.73285964828322 44 19.857725579837233 29.724937997742302 29.413308035098485 21.00402838732198 45 19.245050375954666 33.71121164094148 26.77805021549479 20.265687767609066 46 21.75757046862728 31.71238834667215 27.042161535235014 19.487879649465555 47 20.831069535426444 28.647435879390475 28.784417938850716 21.737076646332365 48 21.711403066754123 27.101165726897296 31.31698144014143 19.87044976620715 49 21.159984122917894 26.971559191394846 31.760301101542947 20.108155584144313 50 19.8962922509142 32.6514445611141 28.21053461288352 19.24172857508818 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1885.0 1 2725.5 2 3566.0 3 8003.5 4 12441.0 5 9739.0 6 7037.0 7 7380.0 8 7723.0 9 8161.5 10 8600.0 11 8763.5 12 8927.0 13 8896.0 14 8865.0 15 8572.5 16 8280.0 17 8100.0 18 7920.0 19 8815.5 20 9711.0 21 9419.0 22 9127.0 23 11707.5 24 14288.0 25 16870.5 26 19453.0 27 22918.5 28 26384.0 29 31125.5 30 35867.0 31 40433.5 32 45000.0 33 53055.0 34 61110.0 35 68621.5 36 76133.0 37 77677.0 38 79221.0 39 91319.5 40 103418.0 41 121209.0 42 139000.0 43 152945.0 44 166890.0 45 164818.0 46 162746.0 47 146208.5 48 129671.0 49 125795.0 50 121919.0 51 110103.0 52 98287.0 53 88234.0 54 78181.0 55 71783.0 56 65385.0 57 61867.0 58 58349.0 59 55946.5 60 53544.0 61 50080.0 62 46616.0 63 40748.0 64 34880.0 65 29410.5 66 23941.0 67 19765.0 68 15589.0 69 13301.0 70 11013.0 71 8748.5 72 6484.0 73 5173.5 74 3863.0 75 3209.0 76 2555.0 77 1904.0 78 1253.0 79 917.0 80 581.0 81 421.5 82 262.0 83 179.0 84 96.0 85 70.0 86 44.0 87 28.0 88 12.0 89 10.5 90 9.0 91 10.5 92 12.0 93 8.0 94 4.0 95 2.5 96 1.0 97 1.5 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1776145.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.450057136722965 #Duplication Level Percentage of deduplicated Percentage of total 1 81.59920183310788 15.871091379649377 2 5.548023089636406 2.1581873217857277 3 1.7755318680166026 1.0360258884298614 4 0.9618729125628526 0.7483393243045446 5 0.6289442704479971 0.6116500998014042 6 0.5286456935649048 0.6169313366951963 7 0.398133846880263 0.5420608248919099 8 0.33625478611498855 0.523213984194647 9 0.2985614575079337 0.5226333666617337 >10 5.061487734760958 25.135516686829444 >50 1.9334141314559339 26.24492882004727 >100 0.9281770983992488 25.387310422341216 >500 8.756387720592572E-4 0.08975455125828673 >1k 5.837591813728381E-4 0.1816096201614543 >5k 2.9187959068641904E-4 0.33074637294799397 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5826 0.3280137601378266 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 2052 0.1155311081020975 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.012780488079520534 0.0 2 0.0 0.0 0.0 0.056470614730216286 0.0 3 0.0 0.0 0.0 0.08439626269251665 0.0 4 0.0 0.0 0.0 0.1414861962283485 0.0 5 0.0 0.0 0.0 0.22261695976398324 0.0 6 0.0 0.0 0.0 0.3592612089666103 0.0 7 0.0 0.0 0.0 0.4235577613314228 0.0 8 0.0 0.0 0.0 0.5808084362481667 0.0 9 0.0 0.0 0.0 0.6488772031562738 0.0 10 0.0 0.0 0.0 0.767223396738442 0.0 11 0.0 0.0 0.0 0.9031357237162506 0.0 12 0.0 0.0 0.0 1.0117980232469759 0.0 13 0.0 0.0 0.0 1.063877104628282 0.0 14 0.0 0.0 0.0 1.086397788468847 0.0 15 0.0 0.0 0.0 1.1144923415599515 0.0 16 0.0 0.0 0.0 1.1790141007631696 0.0 17 0.0 0.0 0.0 1.2510239873433757 0.0 18 0.0 0.0 0.0 1.3483133415346158 0.0 19 0.0 0.0 0.0 1.4035453186536009 0.0 20 0.0 0.0 0.0 1.4578201667093622 5.630170960141205E-5 21 0.0 0.0 0.0 1.531744311416016 5.630170960141205E-5 22 0.0 0.0 0.0 1.6101162911811817 5.630170960141205E-5 23 0.0 0.0 0.0 1.7023384915082946 5.630170960141205E-5 24 0.0 0.0 0.0 1.7692812242243736 5.630170960141205E-5 25 0.0 0.0 0.0 1.827553493661835 5.630170960141205E-5 26 0.0 0.0 0.0 1.8844182203592612 5.630170960141205E-5 27 0.0 0.0 0.0 1.9463501009208144 5.630170960141205E-5 28 0.0 0.0 0.0 2.0082819814823676 5.630170960141205E-5 29 0.0 0.0 0.0 2.0801229629337694 5.630170960141205E-5 30 0.0 0.0 0.0 2.162999079467048 5.630170960141205E-5 31 0.0 0.0 0.0 2.250323031058838 5.630170960141205E-5 32 0.0 0.0 0.0 2.3249790979903104 5.630170960141205E-5 33 0.0 0.0 0.0 2.4089249470060157 5.630170960141205E-5 34 0.0 0.0 0.0 2.4944472438905607 5.630170960141205E-5 35 0.0 0.0 0.0 2.5962407348499137 5.630170960141205E-5 36 0.0 0.0 0.0 2.6875058061138026 5.630170960141205E-5 37 0.0 0.0 0.0 2.7794464978929083 5.630170960141205E-5 38 0.0 0.0 0.0 2.882140816205884 5.630170960141205E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACTATCG 30 2.5285008E-6 44.0 1 TCGTTAG 25 4.4438246E-5 44.0 1 CGACTCG 20 7.8576436E-4 44.0 17 CGTTTTT 5030 0.0 40.063618 1 TACGCGG 50 1.3496901E-9 39.6 2 ACGGGAT 825 0.0 39.466667 5 TACGGGA 665 0.0 39.36842 4 TTACGAG 45 2.3521352E-8 39.11111 1 ATTACGC 40 4.126232E-7 38.5 27 ATAGGGC 730 0.0 38.27397 4 TACGGGT 115 0.0 38.26087 4 AGGGCGA 1575 0.0 38.13333 6 CGTTAGG 185 0.0 38.054054 2 CGTAAGG 220 0.0 38.0 2 CGGGATC 360 0.0 37.88889 6 AATACGG 180 0.0 37.88889 2 GGCGATA 465 0.0 37.849464 8 CGGTAGT 345 0.0 37.623188 12 GTTAGCG 100 0.0 37.399998 1 GCGATAA 100 0.0 37.399998 9 >>END_MODULE