##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547137_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1101681 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.46472163902255 31.0 31.0 33.0 30.0 34.0 2 31.816506774647106 31.0 31.0 34.0 30.0 34.0 3 31.928487465972456 33.0 31.0 34.0 30.0 34.0 4 35.65510705912147 37.0 35.0 37.0 33.0 37.0 5 35.571679097669836 37.0 35.0 37.0 33.0 37.0 6 35.62868289459472 37.0 35.0 37.0 33.0 37.0 7 35.97142730064329 37.0 35.0 37.0 35.0 37.0 8 34.61926728336061 37.0 35.0 37.0 33.0 37.0 9 36.967343541369964 39.0 37.0 39.0 33.0 39.0 10 36.95998206377345 39.0 37.0 39.0 32.0 39.0 11 36.80453960810797 39.0 35.0 39.0 33.0 39.0 12 35.83341275741344 37.0 35.0 39.0 32.0 39.0 13 35.35434849107863 37.0 35.0 39.0 30.0 39.0 14 36.32799603514992 38.0 35.0 41.0 31.0 41.0 15 36.737937751490676 38.0 35.0 41.0 32.0 41.0 16 36.92291507251191 38.0 35.0 41.0 32.0 41.0 17 36.84797958755756 38.0 35.0 41.0 32.0 41.0 18 36.817745790296826 38.0 35.0 40.0 32.0 41.0 19 36.70952117718287 37.0 35.0 40.0 32.0 41.0 20 36.52605881375825 37.0 35.0 40.0 32.0 41.0 21 36.3744042059362 37.0 35.0 40.0 32.0 41.0 22 36.272662413166785 36.0 35.0 40.0 31.0 41.0 23 36.23628436906872 36.0 35.0 40.0 31.0 41.0 24 36.065442718899575 36.0 35.0 40.0 31.0 41.0 25 35.958245626456296 35.0 35.0 40.0 31.0 41.0 26 35.81620541699458 35.0 35.0 40.0 31.0 41.0 27 35.687143556074766 35.0 35.0 40.0 31.0 41.0 28 35.73249788278095 36.0 35.0 40.0 31.0 41.0 29 35.72707616814668 36.0 35.0 40.0 31.0 41.0 30 35.70569429807721 36.0 35.0 40.0 31.0 41.0 31 35.517021714997355 36.0 35.0 40.0 30.0 41.0 32 35.30509829978006 35.0 34.0 40.0 30.0 41.0 33 35.15735317210699 35.0 34.0 40.0 29.0 41.0 34 35.02145357866751 35.0 34.0 40.0 29.0 41.0 35 34.890872221632215 35.0 34.0 40.0 28.0 41.0 36 34.66470330340634 35.0 34.0 40.0 26.0 41.0 37 34.51603050247758 35.0 34.0 40.0 25.0 41.0 38 34.409755637067356 35.0 34.0 40.0 25.0 41.0 39 34.30732943565334 35.0 34.0 40.0 24.0 41.0 40 34.07154884217845 35.0 33.0 40.0 23.0 41.0 41 33.991685433442164 35.0 34.0 40.0 23.0 41.0 42 33.89293543230754 35.0 33.0 40.0 23.0 41.0 43 33.76813433289673 35.0 33.0 40.0 23.0 41.0 44 33.63128255819969 35.0 33.0 40.0 23.0 41.0 45 33.50905570668824 35.0 33.0 39.0 23.0 41.0 46 33.47253333769031 35.0 33.0 39.0 23.0 41.0 47 33.40398536418437 35.0 33.0 39.0 22.0 41.0 48 33.3435513547025 35.0 33.0 39.0 22.0 41.0 49 33.3355444997236 35.0 33.0 39.0 22.0 41.0 50 33.16870128467315 35.0 33.0 39.0 21.0 41.0 51 32.77802376550018 35.0 33.0 38.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 0.0 12 1.0 13 4.0 14 14.0 15 58.0 16 117.0 17 361.0 18 772.0 19 1379.0 20 2391.0 21 3758.0 22 5580.0 23 8029.0 24 11730.0 25 15601.0 26 19202.0 27 21135.0 28 23219.0 29 26140.0 30 29945.0 31 34921.0 32 43024.0 33 56859.0 34 109291.0 35 209913.0 36 71378.0 37 86194.0 38 122721.0 39 197736.0 40 206.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.64667267566564 25.228809428500625 26.069706203519893 15.054811692313837 2 28.03316023422388 29.257108001317988 29.66838858072346 13.041343183734675 3 28.129104522997128 27.089965244022547 31.6582567912127 13.122673441767626 4 24.682734838850813 30.922290572316307 29.690718093531608 14.704256495301271 5 23.487016659087338 33.417477473061616 29.451538149428007 13.643967718423028 6 20.7074461663585 41.43867417156146 26.85005913690079 11.003820525179249 7 85.28276334074927 5.8981683445570905 7.121117637501237 1.6979506771923996 8 82.85928503804641 7.809338637954181 5.635025020854494 3.6963513031449216 9 81.5655348508325 6.651925557398195 8.78766176415859 2.994877827610715 10 56.14755995610344 20.636645272088742 11.839815699825994 11.375979071981817 11 50.30930006054384 20.06016260605384 17.24047160657214 12.390065726830182 12 43.661640710877286 20.62039737455761 20.779245534778216 14.93871637978689 13 20.180433355935158 45.35786675090158 21.807129286971456 12.654570606191811 14 13.870893661595327 46.80520041645449 25.19168434419764 14.132221577752544 15 12.006742423623535 23.77666493295246 50.60775306100405 13.608839582419957 16 13.394439951310769 17.62325028751517 49.715571022827845 19.266738738346216 17 13.944054585674074 19.708518164514047 26.848243729355413 39.49918352045646 18 19.03990356555119 24.11578306242914 34.032809860567625 22.811503511452045 19 27.99040738653022 26.556780047944912 23.333705491880135 22.11910707364473 20 29.848477009224993 24.40987908478044 22.98405799864026 22.757585907354308 21 20.969954097420214 30.89151941442214 26.484345286884313 21.654181201273325 22 22.753410469999935 25.991552908691357 23.38952927390052 27.865507347408187 23 19.220173534807262 33.01273236081951 21.614060694520465 26.15303340985276 24 20.428054945124767 25.698455360490012 37.10157477527524 16.771914919109978 25 17.296113847837987 26.347735869094592 33.99650170966005 22.359648573407366 26 16.81966013755343 36.304429322099594 25.096193907310738 21.77971663303624 27 18.78974040579805 34.56953510135874 25.710255509534974 20.930468983308234 28 14.800926947092671 30.517273148942387 37.98531516836544 16.69648473559951 29 14.168438958282842 26.170733633420202 37.41373410270305 22.247093305593907 30 18.187842034127847 32.01589207765224 30.798025925835155 18.998239962384755 31 28.070376088904137 28.262446207205173 22.6632754853719 21.003902218518792 32 29.950593683652528 27.845719405163567 24.94751202934425 17.256174881839662 33 27.690411289656442 29.072934905839347 22.27532289292454 20.96133091157967 34 19.639169596280592 27.477736295715367 27.922601914710338 24.960492193293703 35 18.96293028562715 26.310610784791606 29.83631377867096 24.89014515091029 36 32.67424962398371 22.878582820253776 25.175164135534693 19.272003420227815 37 21.085504787683547 30.01676528868157 28.301659010185343 20.596070913449537 38 21.834269629774862 31.436958611431077 24.060957754558714 22.667814004235346 39 21.132069991222505 30.924832142879836 25.519819258024786 22.42327860787288 40 24.80463945552297 24.427760849102416 24.66939159339228 26.098208101982333 41 17.744519511546446 22.274687500283658 26.834174320878727 33.146618667291165 42 23.094616318153804 26.66388909312224 23.060214345168884 27.18128024355508 43 23.12366283887986 26.15639191381171 25.572556847218024 25.14738840009041 44 21.511762479338394 30.230983379036218 26.104017406127543 22.153236735497845 45 17.613537857147396 35.475968088766166 21.895358093676844 25.01513596040959 46 23.42810668423981 30.455458522022255 25.955153987406515 20.161280806331416 47 23.87896314813453 24.857740126225288 27.09840688910855 24.16488983653163 48 24.615201678162734 21.082963217120017 30.35561110702644 23.9462239976908 49 21.529916554792177 19.496206252082047 32.97687806179829 25.99699913132749 50 19.431668513843846 30.58544170227135 27.434348055380823 22.548541728503988 51 18.37074434432472 32.85343034871256 23.87224614021663 24.90357916674609 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2175.0 1 2351.5 2 2528.0 3 5137.0 4 7746.0 5 6069.0 6 4392.0 7 5110.5 8 5829.0 9 6688.5 10 7548.0 11 7922.0 12 8296.0 13 8524.0 14 8752.0 15 8716.5 16 8681.0 17 8342.0 18 8003.0 19 7646.5 20 7290.0 21 7103.5 22 6917.0 23 6736.5 24 6556.0 25 5958.0 26 5421.0 27 5482.0 28 6489.5 29 7497.0 30 8121.0 31 8745.0 32 9545.5 33 10346.0 34 13118.0 35 15890.0 36 16961.5 37 18033.0 38 25175.0 39 32317.0 40 49763.5 41 67210.0 42 84585.5 43 101961.0 44 105905.5 45 109850.0 46 109349.0 47 108848.0 48 107330.0 49 105812.0 50 96977.5 51 88143.0 52 77039.5 53 65936.0 54 59528.5 55 53121.0 56 48210.5 57 43300.0 58 40914.5 59 38529.0 60 35729.0 61 32929.0 62 29826.0 63 26723.0 64 24295.5 65 21868.0 66 18278.0 67 14688.0 68 13432.5 69 12177.0 70 10430.0 71 8683.0 72 7246.0 73 5809.0 74 4492.0 75 2513.0 76 1851.0 77 1521.5 78 1192.0 79 996.5 80 801.0 81 572.5 82 344.0 83 240.0 84 136.0 85 133.5 86 131.0 87 99.0 88 67.0 89 38.5 90 10.0 91 6.5 92 3.0 93 1.5 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1101681.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.746171954134038 #Duplication Level Percentage of deduplicated Percentage of total 1 84.0380246841618 19.11543360151705 2 6.42752761246043 2.924032966259391 3 1.9942249777406396 1.3608295277675315 4 0.9851562971262674 0.8963413814452817 5 0.5952428458842896 0.676974806347608 6 0.4486645041088029 0.6123239976105065 7 0.3127071165429438 0.4979022890917063 8 0.2407898377163168 0.4381637642802697 9 0.1907109300834546 0.39041492482899837 >10 2.339545626945 12.998828071424217 >50 1.2778850325305504 21.714615737907554 >100 1.143349164613432 36.22031782178791 >500 0.0028799727068348413 0.46894623423276066 >1k 0.0032913973792398185 1.6848748754992264 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4194 0.3806909622658465 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3345 0.30362691196453423 No Hit GAGCTGTCTCTTATACACATCTGACGCAATCGCTGTCGTATGCCGTCTTCT 1973 0.17908995435157726 No Hit GAGAGCTGTCTCTTATACACATCTGACGCAATCGCTGTCGTATGCCGTCTT 1844 0.16738057568388673 No Hit AAGAGCTGTCTCTTATACACATCTGACGCAATCGCTGTCGTATGCCGTCTT 1831 0.16620056077939077 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1706 0.1548542636207759 No Hit AAGCTGTCTCTTATACACATCTGACGCAATCGCTGTCGTATGCCGTCTTCT 1634 0.14831879645741372 No Hit TAGAGCTGTCTCTTATACACATCTGACGCAATCGCTGTCGTATGCCGTCTT 1477 0.13406784722619344 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.09276732556883527 0.0 2 0.0 0.0 0.0 0.2821143325518004 0.0 3 0.0 0.0 0.0 0.41109903865093433 0.0 4 0.0 0.0 0.0 0.9185054475841918 0.0 5 0.0 0.0 0.0 1.330875271516891 0.0 6 0.0 0.0 0.0 2.4527971345607305 0.0 7 0.0 0.0 0.0 2.809615487604851 0.0 8 0.0 0.0 0.0 3.786395517395689 0.0 9 0.0 0.0 0.0 4.241881270531125 0.0 10 0.0 0.0 0.0 4.9429916645562555 0.0 11 0.0 0.0 0.0 5.514209648709563 0.0 12 0.0 0.0 0.0 6.045397896487277 0.0 13 0.0 0.0 0.0 6.326786066020926 0.0 14 0.0 0.0 0.0 6.442064445152454 0.0 15 0.0 0.0 0.0 6.542547252789147 0.0 16 0.0 0.0 0.0 6.733165045053877 0.0 17 0.0 0.0 0.0 6.917428910909782 0.0 18 0.0 0.0 0.0 7.226502045510451 0.0 19 0.0 0.0 0.0 7.341780424641979 0.0 20 0.0 0.0 0.0 7.470946671495651 0.0 21 0.0 0.0 0.0 7.626527098134578 0.0 22 0.0 0.0 0.0 7.767130412524134 0.0 23 0.0 0.0 0.0 7.938232573676046 0.0 24 0.0 0.0 0.0 8.070031161470517 0.0 25 0.0 0.0 0.0 8.16715546514826 0.0 26 0.0 0.0 0.0 8.261375116753397 0.0 27 0.0 0.0 0.0 8.349150071572442 0.0 28 0.0 0.0 0.0 8.438558893182329 0.0 29 0.0 0.0 0.0 8.527876944414944 0.0 30 0.0 0.0 0.0 8.682821978412989 0.0 31 0.0 0.0 0.0 8.79692034264002 0.0 32 0.0 0.0 0.0 8.88269834915915 0.0 33 0.0 0.0 0.0 8.979459571327816 0.0 34 0.0 0.0 0.0 9.072589978405727 0.0 35 0.0 0.0 0.0 9.207111677518265 0.0 36 0.0 0.0 0.0 9.308683729682185 0.0 37 0.0 0.0 0.0 9.4099834707143 0.0 38 0.0 0.0 0.0 9.51409709344175 0.0 39 0.0 0.0 0.0 9.61657684937836 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGAATT 30 2.1654196E-6 45.000004 6 AGGTACA 35 1.2118653E-7 45.000004 17 GTACCCG 35 1.2118653E-7 45.000004 25 TACCCCG 30 2.1654196E-6 45.000004 25 GCCCACG 30 2.1654196E-6 45.000004 20 CACGGTA 30 2.1654196E-6 45.000004 23 CTATCGA 30 2.1654196E-6 45.000004 30 CGCATCA 30 2.1654196E-6 45.000004 36 GGCGTAG 45 3.8562575E-10 45.000004 1 ACATTCG 30 2.1654196E-6 45.000004 14 TCGATTG 30 2.1654196E-6 45.000004 1 CGTTCGA 30 2.1654196E-6 45.000004 14 TGCATAA 30 2.1654196E-6 45.000004 22 TAACCGG 45 3.8562575E-10 45.000004 2 GTACTAA 35 1.2118653E-7 45.000004 9 TTGCGAT 30 2.1654196E-6 45.000004 11 ACTCGAT 30 2.1654196E-6 45.000004 19 ACGTAAG 30 2.1654196E-6 45.000004 1 CGACTCC 30 2.1654196E-6 45.000004 28 TTCGAAT 30 2.1654196E-6 45.000004 16 >>END_MODULE