##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547136_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1251194 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.438175055187283 31.0 31.0 33.0 30.0 34.0 2 31.81948442847392 31.0 31.0 34.0 30.0 34.0 3 31.854469410818787 31.0 31.0 34.0 30.0 34.0 4 35.662919579217935 37.0 35.0 37.0 33.0 37.0 5 35.62143680356523 37.0 35.0 37.0 33.0 37.0 6 35.668013913110194 37.0 35.0 37.0 33.0 37.0 7 36.041274174908125 37.0 35.0 37.0 35.0 37.0 8 34.728808641985175 37.0 35.0 37.0 33.0 37.0 9 37.03161300325929 39.0 37.0 39.0 34.0 39.0 10 36.75438660991021 39.0 37.0 39.0 32.0 39.0 11 36.837799733694375 39.0 37.0 39.0 32.0 39.0 12 36.752209489495634 39.0 35.0 39.0 32.0 39.0 13 36.775780574395334 39.0 35.0 39.0 33.0 39.0 14 37.90922191123039 40.0 37.0 41.0 33.0 41.0 15 38.005616235371974 40.0 37.0 41.0 33.0 41.0 16 37.998780364995355 40.0 37.0 41.0 33.0 41.0 17 37.85809954331622 40.0 36.0 41.0 33.0 41.0 18 37.74882312415181 39.0 36.0 41.0 33.0 41.0 19 37.637784388352244 39.0 36.0 41.0 33.0 41.0 20 37.45301927598758 39.0 35.0 41.0 32.0 41.0 21 37.36742903178884 39.0 35.0 41.0 32.0 41.0 22 37.26709367212439 39.0 35.0 41.0 32.0 41.0 23 37.16518061947228 39.0 35.0 41.0 32.0 41.0 24 37.02019031421187 39.0 35.0 41.0 32.0 41.0 25 36.92283370924093 39.0 35.0 41.0 31.0 41.0 26 36.83710839406199 39.0 35.0 41.0 31.0 41.0 27 36.7464597816166 38.0 35.0 41.0 31.0 41.0 28 36.760499171191675 39.0 35.0 41.0 31.0 41.0 29 36.701057549828406 39.0 35.0 41.0 31.0 41.0 30 36.60752768955094 38.0 35.0 41.0 31.0 41.0 31 36.47655919066108 39.0 35.0 41.0 30.0 41.0 32 36.27054157868404 39.0 35.0 41.0 30.0 41.0 33 35.99259027776668 39.0 35.0 41.0 29.0 41.0 34 35.67963880900963 39.0 35.0 41.0 26.0 41.0 35 35.46554251379083 39.0 35.0 41.0 25.0 41.0 36 35.31882745601401 39.0 35.0 41.0 24.0 41.0 37 35.282033801312984 39.0 35.0 41.0 24.0 41.0 38 35.15115241920917 38.0 35.0 41.0 23.0 41.0 39 35.06208229898801 38.0 34.0 41.0 23.0 41.0 40 34.93791929948513 38.0 34.0 40.0 23.0 41.0 41 34.82548429739912 38.0 34.0 40.0 23.0 41.0 42 34.75603543495254 38.0 34.0 40.0 23.0 41.0 43 34.66397537072588 38.0 34.0 40.0 22.0 41.0 44 34.541886390120155 38.0 34.0 40.0 22.0 41.0 45 34.413935009279136 38.0 34.0 40.0 22.0 41.0 46 34.32993284814345 37.0 34.0 40.0 22.0 41.0 47 34.263404396120826 37.0 33.0 40.0 22.0 41.0 48 34.1821436164176 37.0 33.0 40.0 21.0 41.0 49 34.095758131832476 37.0 33.0 40.0 20.0 41.0 50 34.00707963753023 37.0 33.0 40.0 20.0 41.0 51 33.679080941884315 36.0 33.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 0.0 9 1.0 10 1.0 11 1.0 12 4.0 13 3.0 14 10.0 15 36.0 16 99.0 17 276.0 18 638.0 19 1193.0 20 2060.0 21 3227.0 22 4795.0 23 7181.0 24 10934.0 25 16972.0 26 24151.0 27 27917.0 28 27844.0 29 27420.0 30 29797.0 31 33920.0 32 40873.0 33 50693.0 34 77624.0 35 105651.0 36 100064.0 37 130341.0 38 194319.0 39 332958.0 40 190.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.4876078369941 23.602574820531427 25.87608316536045 18.03373417711402 2 36.714849975303586 23.769455416186457 25.78409103624218 13.731603572267769 3 28.965452200058508 24.444490622557332 33.47762217529816 13.112435002086006 4 24.919476915650172 26.844438192638393 33.17766869086648 15.058416200844954 5 22.538870870544457 30.31272528480795 32.347341819094396 14.801062025553192 6 20.97636337770162 39.31708432105653 29.94955218775026 9.757000113491593 7 84.75935786137082 3.0343016350781733 10.769233228420214 1.437107275130795 8 82.33623243078212 5.4767685906422185 10.2322261775552 1.9547728010204652 9 79.68580411990467 4.143721916825049 13.263011171728763 2.907462791541519 10 31.729771722051098 26.689226450894104 28.842209921083384 12.738791905971416 11 29.22552377968564 27.032818252005686 27.566468509279936 16.175189459028736 12 25.22982047548182 24.42874566214352 31.767575611775634 18.57385825059903 13 22.66906650767187 26.18850474027209 33.09742533931588 18.04500341274015 14 21.16849984894429 26.91716872043824 33.70852162014843 18.205809810469038 15 21.618150342792564 24.170672173939455 35.890277606829954 18.320899876438027 16 23.641018099511346 23.480931014694765 34.94717845513965 17.930872430654237 17 22.56348735687671 23.530243911016196 32.46498944208492 21.441279290022173 18 24.28440353774075 22.90356251708368 33.10581732329279 19.706216621882778 19 25.609617693179477 25.631836469804043 29.794580216976748 18.963965620039737 20 27.926844278345325 24.487249779011087 29.394322543106828 18.19158339953676 21 26.045041776095474 25.545518920327304 30.32679184842638 18.08264745515084 22 24.50763031152643 22.30013890731573 31.43661174845787 21.755619032699965 23 22.931695644320545 26.480226088040702 30.790828600520783 19.79724966711797 24 21.669141635909376 25.31437970450626 34.2474468387796 18.76903182080477 25 22.788552374771616 25.68762318233623 31.986966050029014 19.536858392863138 26 21.682249115644737 26.7991214791631 30.83462676451453 20.684002640677623 27 21.3321834983224 25.209120248338785 31.528923572203833 21.929772681134978 28 20.285343439946164 27.10059351307631 32.534123405323236 20.079939641654292 29 21.137729241028968 25.195613150318813 32.12003893880565 21.546618669846563 30 22.458787366307703 24.50739054055566 33.07648534120208 19.95733675193455 31 24.09386553963654 25.561503651711888 30.165266137785185 20.179364670866388 32 23.389498351174957 25.008192174834598 30.332866046352525 21.26944342763792 33 22.86368061227915 25.406132062653754 29.74638625185223 21.983801073214863 34 20.763686526629762 26.934991695932048 31.304577867221226 20.99674391021696 35 21.34329288663469 27.444345161501733 30.76533295396238 20.447028997901203 36 23.098336469004806 28.768600233057384 27.80216337354559 20.33089992439222 37 22.344336689594098 28.374097062485916 28.453940795751897 20.82762545216809 38 22.081867400259274 28.145115785401785 29.323909801357743 20.449107012981198 39 22.68329291860415 27.182195566794597 27.75372963745031 22.380781877150945 40 23.781204193754128 26.31997915591027 29.27187950070093 20.62693714963467 41 20.9703691034324 27.146789386777748 28.92868731787397 22.954154191915883 42 22.802539014733128 27.317746088935845 27.627450259512116 22.25226463681891 43 22.20526952654824 26.03688956308934 29.185561951224194 22.57227895913823 44 22.51257598741682 26.859943382081436 29.085497532756712 21.541983097745035 45 22.000505117511754 26.706250189818686 28.321747067201407 22.971497625468153 46 22.613040024168914 26.495251735542208 28.540418192542482 22.351290047746392 47 21.68424720706781 27.451937908909407 29.703067629800017 21.160747254222766 48 22.57835315706437 26.68690866484334 29.54457901812189 21.190159159970396 49 22.251865018534296 26.87808605220294 29.13041462794738 21.739634301315384 50 21.183525496445796 27.311432120038937 30.0110934035809 21.493948979934366 51 21.664346216494003 26.823178499896898 29.294737666580883 22.217737617028217 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 765.0 1 1271.0 2 1777.0 3 12492.5 4 23208.0 5 16700.5 6 10193.0 7 10103.5 8 10014.0 9 10331.5 10 10649.0 11 10599.5 12 10550.0 13 10399.5 14 10249.0 15 9869.5 16 9490.0 17 9022.5 18 8555.0 19 8471.5 20 8388.0 21 8320.0 22 8252.0 23 8466.5 24 8681.0 25 9228.0 26 11319.5 27 12864.0 28 14566.5 29 16269.0 30 18593.0 31 20917.0 32 24803.5 33 28690.0 34 32807.5 35 36925.0 36 40432.5 37 43940.0 38 48032.5 39 52125.0 40 56081.5 41 60038.0 42 64517.5 43 68997.0 44 71788.5 45 74580.0 46 79582.0 47 84584.0 48 87692.5 49 90801.0 50 91166.0 51 91531.0 52 87397.0 53 83263.0 54 77455.0 55 71647.0 56 66032.0 57 60417.0 58 55862.0 59 51307.0 60 48281.5 61 45256.0 62 40090.5 63 34925.0 64 30965.0 65 27005.0 66 23198.0 67 19391.0 68 16865.0 69 14339.0 70 12440.0 71 10541.0 72 9050.5 73 7560.0 74 6677.0 75 4823.0 76 3852.0 77 2809.5 78 1767.0 79 1224.0 80 681.0 81 546.0 82 411.0 83 281.0 84 151.0 85 100.5 86 50.0 87 34.5 88 19.0 89 13.0 90 7.0 91 4.0 92 1.0 93 1.5 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1251194.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.84253695120757 #Duplication Level Percentage of deduplicated Percentage of total 1 70.66237364999091 23.913939913098538 2 7.025385986634671 4.755137696983593 3 3.7208843260824174 3.7777249588983985 4 2.6836822414838917 3.6329046169087262 5 2.1427239649850325 3.6257607480621985 6 1.7956323306700221 3.6461252100889916 7 1.550612951181457 3.673367326816564 8 1.3216784372730976 3.5783161080823267 9 1.229026785466623 3.7434045961060245 >10 7.800019223441478 41.8508812980529 >50 0.043155632508350805 0.9953663454970504 >100 0.02410142752138786 1.668174369412757 >500 4.820285071323575E-4 0.11125512078758641 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 2.4101425356617875E-4 1.0276416912043995 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12599 1.0069581535717083 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.5984731384581448E-4 0.0 0.0 0.03180961545531708 0.0 2 1.5984731384581448E-4 0.0 0.0 0.1027818228028587 0.0 3 1.5984731384581448E-4 0.0 0.0 0.18262555606884304 0.0 4 1.5984731384581448E-4 0.0 0.0 0.2937194391916841 0.0 5 1.5984731384581448E-4 0.0 0.0 0.5052773590666195 0.0 6 1.5984731384581448E-4 0.0 0.0 0.985698460830215 0.0 7 1.5984731384581448E-4 0.0 0.0 1.2265883627958574 0.0 8 1.5984731384581448E-4 0.0 0.0 1.761996940522413 0.0 9 1.5984731384581448E-4 0.0 0.0 2.0580341657648615 0.0 10 1.5984731384581448E-4 0.0 0.0 2.464206190247076 0.0 11 1.5984731384581448E-4 0.0 0.0 2.7404223485726433 0.0 12 1.5984731384581448E-4 0.0 0.0 2.960771870709099 0.0 13 1.5984731384581448E-4 0.0 0.0 3.0964023165072723 0.0 14 1.5984731384581448E-4 0.0 0.0 3.1781642175394063 0.0 15 1.5984731384581448E-4 0.0 0.0 3.249056501230025 0.0 16 1.5984731384581448E-4 0.0 0.0 3.36190870480517 0.0 17 1.5984731384581448E-4 0.0 0.0 3.4777980073433854 0.0 18 1.5984731384581448E-4 0.0 0.0 3.641321809407654 0.0 19 1.5984731384581448E-4 0.0 0.0 3.7231636340967107 0.0 20 1.5984731384581448E-4 0.0 0.0 3.818432633148816 0.0 21 1.5984731384581448E-4 0.0 0.0 3.928247737760891 0.0 22 1.5984731384581448E-4 0.0 0.0 4.053967650100624 0.0 23 2.3977097076872172E-4 0.0 0.0 4.1992688583864695 0.0 24 2.3977097076872172E-4 0.0 0.0 4.316436939435452 0.0 25 2.3977097076872172E-4 0.0 0.0 4.422016090230612 0.0 26 2.3977097076872172E-4 0.0 0.0 4.516885470998103 0.0 27 2.3977097076872172E-4 0.0 0.0 4.621665385224034 0.0 28 2.3977097076872172E-4 0.0 0.0 4.734917207083794 0.0 29 2.3977097076872172E-4 0.0 0.0 4.854802692468154 0.0 30 2.3977097076872172E-4 0.0 0.0 5.013131456832434 0.0 31 2.3977097076872172E-4 0.0 0.0 5.13949075842755 0.0 32 2.3977097076872172E-4 0.0 0.0 5.278238226845717 0.0 33 2.3977097076872172E-4 0.0 0.0 5.416426229665424 0.0 34 2.3977097076872172E-4 0.0 0.0 5.547900645303606 0.0 35 2.3977097076872172E-4 0.0 0.0 5.700554830026359 0.0 36 2.3977097076872172E-4 0.0 0.0 5.83474664999992 0.0 37 2.3977097076872172E-4 0.0 0.0 5.974213431330393 0.0 38 2.3977097076872172E-4 0.0 0.0 6.151324255071556 0.0 39 2.3977097076872172E-4 0.0 0.0 6.380385455812608 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGTTAG 30 2.165656E-6 45.000004 1 CGCATCG 30 2.165656E-6 45.000004 21 CGGTAAT 20 7.0335256E-4 45.000004 6 CGTTTTT 9840 0.0 42.80488 1 TACGGGT 200 0.0 40.500004 4 ATACGTC 40 3.4585537E-7 39.375004 35 AGGGCGA 1475 0.0 39.203392 6 AGGGTAC 800 0.0 38.812504 6 TCGTAAG 70 0.0 38.571426 1 GGGCGAT 3140 0.0 38.192673 7 TAGGGTA 950 0.0 37.89474 5 TACTCGC 30 1.13997965E-4 37.500004 45 CGTTAGG 170 0.0 37.058823 2 CACGACC 1595 0.0 36.959248 27 TACGCGG 110 0.0 36.81818 2 CGAGGGA 715 0.0 36.81818 4 CGTAAGG 220 0.0 36.81818 2 ATAGGGT 845 0.0 36.74556 4 GCGAGAC 1630 0.0 36.717793 21 GGCGATT 705 0.0 36.702126 8 >>END_MODULE