SRR1547133_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547133_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	794340
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6106	0.7686884709318428	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCGTTAG	25	3.889713E-5	45.000004	1
CGCATCG	20	7.0319686E-4	45.0	21
CGTTAGT	20	7.0319686E-4	45.0	28
GCGATAT	85	0.0	42.35294	9
TACGTAG	60	3.6379788E-12	41.249996	1
CGTTTTT	4020	0.0	40.80224	1
CGTTAGG	105	0.0	40.714287	2
CTACGAA	40	3.4564255E-7	39.375	11
ACACGAC	375	0.0	39.0	26
GGTACCT	470	0.0	38.776596	8
GGGCGAT	1890	0.0	38.57143	7
TTAACGG	70	0.0	38.571426	2
TAGGGAC	475	0.0	38.36842	5
CACGACC	390	0.0	38.076923	27
GCGATTC	65	9.094947E-12	38.07692	9
GTTGATC	470	0.0	37.81915	16
AACGGGA	245	0.0	37.65306	4
TAGACGG	60	1.546141E-10	37.499996	2
TAGTTCG	30	1.1396045E-4	37.499996	1
CGAATAT	30	1.1396045E-4	37.499996	14