##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547133_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 794340 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.426744215323414 31.0 31.0 33.0 30.0 34.0 2 31.800786816728355 31.0 31.0 34.0 30.0 34.0 3 31.895514515195003 31.0 31.0 34.0 30.0 34.0 4 35.66857768713649 37.0 35.0 37.0 33.0 37.0 5 35.603610544603065 37.0 35.0 37.0 33.0 37.0 6 35.64279401767505 37.0 35.0 37.0 33.0 37.0 7 35.99445829241886 37.0 35.0 37.0 35.0 37.0 8 34.66384923332578 37.0 35.0 37.0 33.0 37.0 9 36.98013696905607 39.0 37.0 39.0 33.0 39.0 10 36.87705138857416 39.0 37.0 39.0 32.0 39.0 11 36.783784021955334 39.0 37.0 39.0 32.0 39.0 12 36.502717979706425 39.0 35.0 39.0 32.0 39.0 13 36.43500390261097 39.0 35.0 39.0 32.0 39.0 14 37.48261197975678 40.0 36.0 41.0 32.0 41.0 15 37.63289145705869 40.0 36.0 41.0 32.0 41.0 16 37.68965808092253 40.0 36.0 41.0 33.0 41.0 17 37.58404461565576 40.0 36.0 41.0 32.0 41.0 18 37.50860840446157 39.0 36.0 41.0 32.0 41.0 19 37.44008359140922 39.0 36.0 41.0 32.0 41.0 20 37.285692524611626 39.0 35.0 41.0 32.0 41.0 21 37.17956794319813 39.0 35.0 41.0 32.0 41.0 22 37.09285318629302 39.0 35.0 41.0 32.0 41.0 23 36.99273862577738 39.0 35.0 41.0 31.0 41.0 24 36.838360148047435 39.0 35.0 41.0 31.0 41.0 25 36.71880932598132 38.0 35.0 41.0 31.0 41.0 26 36.59939068912556 38.0 35.0 41.0 31.0 41.0 27 36.47854319309112 38.0 35.0 41.0 31.0 41.0 28 36.4991603091875 38.0 35.0 41.0 31.0 41.0 29 36.441230455472464 38.0 35.0 41.0 30.0 41.0 30 36.3787546894277 38.0 35.0 40.0 30.0 41.0 31 36.26585970743007 38.0 35.0 40.0 30.0 41.0 32 36.16783996777199 38.0 35.0 41.0 30.0 41.0 33 36.00943298839288 38.0 35.0 41.0 30.0 41.0 34 35.82061711609638 38.0 35.0 41.0 29.0 41.0 35 35.671040108769546 38.0 35.0 41.0 28.0 41.0 36 35.514824886068936 38.0 35.0 40.0 27.0 41.0 37 35.469826522647736 38.0 35.0 40.0 27.0 41.0 38 35.349185487322806 38.0 34.0 40.0 27.0 41.0 39 35.25249641211572 38.0 34.0 40.0 26.0 41.0 40 35.081932170103485 38.0 34.0 40.0 25.0 41.0 41 34.958983558677645 37.0 34.0 40.0 25.0 41.0 42 34.87912984364378 37.0 34.0 40.0 25.0 41.0 43 34.78377772742151 37.0 34.0 40.0 24.0 41.0 44 34.65613213485409 37.0 34.0 40.0 24.0 41.0 45 34.53656368809326 37.0 34.0 40.0 24.0 41.0 46 34.45362313367072 36.0 34.0 40.0 23.0 41.0 47 34.36875141627011 36.0 33.0 40.0 23.0 41.0 48 34.28169675453836 36.0 33.0 40.0 23.0 41.0 49 34.18295062567666 36.0 33.0 40.0 24.0 41.0 50 34.09050784298915 35.0 33.0 40.0 24.0 41.0 51 33.73283606516102 35.0 33.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 1.0 12 3.0 13 5.0 14 9.0 15 24.0 16 78.0 17 210.0 18 414.0 19 794.0 20 1345.0 21 2016.0 22 3079.0 23 4540.0 24 6462.0 25 9177.0 26 12280.0 27 14209.0 28 15367.0 29 16869.0 30 19454.0 31 23334.0 32 28434.0 33 36978.0 34 58814.0 35 80050.0 36 66642.0 37 86546.0 38 121310.0 39 185763.0 40 131.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.04600045320644 23.450159881159202 27.333131908250873 15.17070775738349 2 34.22942316892011 24.64473651081401 27.250799405796005 13.875040914469874 3 29.2155751945011 25.28766019588589 31.408590779766847 14.088173829846163 4 25.850139738650956 28.13618853387718 30.39655563108996 15.617116096381903 5 23.362665860966338 31.615051489286706 29.83810458997407 15.184178059772893 6 21.976357730946447 40.441750383966564 27.10161895410026 10.48027293098673 7 86.37308960898355 3.5465921393861572 8.105471208802276 1.9748470428280083 8 83.85376539013521 5.964448472946094 7.760027192386132 2.4217589445325682 9 81.4035551527054 4.904197195155727 10.386484376967042 3.3057632751718407 10 43.68217639801596 26.73338872523101 16.357479165093032 13.226955711659993 11 34.33794093209457 25.46088576680011 23.88851121685928 16.31266208424604 12 29.54314273484906 21.803509832061838 29.00030213762369 19.653045295465418 13 25.271294407936146 25.405745650477122 30.24246544300929 19.080494498577437 14 22.51793942140645 26.526298562328478 31.274013646549335 19.681748369715738 15 21.10859329758038 22.6512576478586 36.35609436765113 19.884054686909888 16 24.779691316061133 21.16725835284639 33.611299947125914 20.441750383966564 17 24.509781705566887 21.770904146838884 29.470126142457893 24.24918800513634 18 25.473348943777225 22.424024976710225 30.476873882720245 21.625752196792305 19 28.169801344512425 24.336556134652668 27.01110355767052 20.482538963164387 20 29.508648689478058 24.10479139914898 26.23725356900068 20.149306342372284 21 27.691039101644133 25.254425057280255 27.805851398645416 19.248684442430193 22 26.891381524284313 22.802326459702392 27.447692423899085 22.85859959211421 23 25.063071228944782 25.569277639298033 27.010599994964373 22.357051136792812 24 24.091950550142258 24.329002694060478 30.64128710627691 20.937759649520356 25 24.640204446458693 24.451997885036633 28.698038623259563 22.209759045245107 26 22.834680363572275 26.152655034368156 27.319409824508394 23.693254777551175 27 22.850794370168945 24.606843417176524 29.018052723015337 23.524309489639197 28 22.152982350127147 25.35740363068711 30.585769317924317 21.903844701261423 29 23.11503890021905 24.23987209507264 30.216406072966233 22.428682931742074 30 24.000050356270613 24.2542236321978 29.72442530906161 22.021300702469976 31 26.293526701412496 24.578769796308887 27.279124808016718 21.848578694261903 32 27.199939572475262 24.636175944809526 26.340609814437144 21.823274668278067 33 26.177203716292773 24.565047712566408 26.36163355741874 22.896115013722085 34 23.158597074300676 27.084246040738226 27.998715915099325 21.758440969861773 35 24.365133318226455 26.030289296774683 28.09124556235365 21.513331822645217 36 26.21169776166377 26.87526751768764 25.77813027167208 21.134904448976506 37 24.48296699146461 27.356044011380515 25.9713724601556 22.18961653699927 38 24.75778633834378 27.477906186267848 25.37024447969383 22.39406299569454 39 24.894881285092026 25.755973512601653 25.72047234181836 23.62867286048795 40 26.03721328398419 24.34499080998061 26.709595387365614 22.908200518669588 41 23.376262054032278 23.742352141400406 27.321927638039128 25.559458166528188 42 24.479693833874663 24.688672356925245 26.250723871390086 24.580909937810006 43 23.523050582873832 24.299292494397864 27.770350227862124 24.40730669486618 44 23.62011229448347 25.34556990709268 27.57610091396631 23.458216884457535 45 22.75927184832691 25.896845179645993 26.655210615101844 24.688672356925245 46 23.752045723493715 25.844096986177206 26.778079915401463 23.625777374927612 47 23.475086235113427 25.613717048115415 27.942820454717122 22.968376262054033 48 24.001435153712517 24.938439459173654 28.114913009542512 22.945212377571316 49 23.789687035778133 24.606843417176524 28.20605785935494 23.397411687690408 50 22.72314122416094 26.12709922703125 28.300601757433846 22.84915779137397 51 22.696074728705593 26.328272528136566 27.281264949517837 23.694387793640004 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 752.0 1 1080.0 2 1408.0 3 5881.0 4 10354.0 5 7106.5 6 3859.0 7 3897.0 8 3935.0 9 4075.5 10 4216.0 11 4309.5 12 4403.0 13 4406.5 14 4410.0 15 4304.0 16 4198.0 17 4127.5 18 4057.0 19 3903.5 20 3750.0 21 3766.0 22 3782.0 23 3939.0 24 4096.0 25 4368.5 26 5078.5 27 5516.0 28 6636.5 29 7757.0 30 8996.0 31 10235.0 32 11798.0 33 13361.0 34 15390.5 35 17420.0 36 18952.5 37 20485.0 38 22703.5 39 24922.0 40 29331.5 41 33741.0 42 36744.5 43 39748.0 44 42204.0 45 44660.0 46 48327.5 47 51995.0 48 54025.0 49 56055.0 50 54757.5 51 53460.0 52 52166.0 53 50872.0 54 48543.0 55 46214.0 56 45549.0 57 44884.0 58 43663.0 59 42442.0 60 41100.0 61 39758.0 62 37740.5 63 35723.0 64 32653.5 65 29584.0 66 25881.5 67 22179.0 68 19142.0 69 16105.0 70 13535.0 71 10965.0 72 9177.5 73 7390.0 74 6163.5 75 3901.5 76 2866.0 77 2300.0 78 1734.0 79 1260.0 80 786.0 81 599.5 82 413.0 83 284.0 84 155.0 85 102.0 86 49.0 87 45.5 88 42.0 89 25.5 90 9.0 91 7.0 92 5.0 93 7.0 94 9.0 95 5.5 96 2.0 97 1.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 794340.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.186972555923525 #Duplication Level Percentage of deduplicated Percentage of total 1 70.96612635962131 22.84184761537332 2 6.806448403822916 4.381579359543155 3 3.5333637160089233 3.411848428718256 4 2.5453448233623774 3.2770777589970748 5 1.9849801237465394 3.1945250383541777 6 1.5963845368846576 3.0829671166444297 7 1.3687242599557887 3.0838563134276598 8 1.2123615410200197 3.1217798118934823 9 1.0941094523324817 3.16944638238619 >10 8.832589597593298 47.42324694786825 >50 0.03702825108125955 0.7951560783316914 >100 0.02173397262148785 1.3265555537522191 >500 4.024809744719958E-4 0.09910302720902789 >1k 0.0 0.0 >5k 4.024809744719958E-4 0.7910105675010773 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6106 0.7686884709318428 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.027947730191102048 0.0 2 0.0 0.0 0.0 0.0936626633431528 0.0 3 0.0 0.0 0.0 0.1642873328801269 0.0 4 0.0 0.0 0.0 0.30931339225016996 0.0 5 0.0 0.0 0.0 0.5187954780068988 0.0 6 0.0 0.0 0.0 1.044011380517159 0.0 7 0.0 0.0 0.0 1.3064934410957525 0.0 8 0.0 0.0 0.0 1.8906261802250925 0.0 9 0.0 0.0 0.0 2.244253090616109 0.0 10 0.0 0.0 0.0 2.704131732003928 0.0 11 0.0 0.0 0.0 3.045799028123977 0.0 12 0.0 0.0 0.0 3.3085328700556436 0.0 13 0.0 0.0 0.0 3.470302389405041 0.0 14 0.0 0.0 0.0 3.5574187375682955 0.0 15 0.0 0.0 0.0 3.6348415036382407 0.0 16 0.0 0.0 0.0 3.742100360047335 0.0 17 0.0 0.0 0.0 3.8425611199234586 0.0 18 0.0 0.0 0.0 3.9948888385326184 0.0 19 0.0 0.0 0.0 4.085656016315432 0.0 20 0.0 0.0 0.0 4.182591837248533 0.0 21 0.0 0.0 0.0 4.293375632600649 0.0 22 0.0 0.0 0.0 4.418133293048317 0.0 23 0.0 0.0 0.0 4.546919455145152 0.0 24 0.0 0.0 0.0 4.654178311554246 0.0 25 0.0 0.0 0.0 4.757786338343783 0.0 26 0.0 0.0 0.0 4.857491754160687 0.0 27 0.0 0.0 0.0 4.9657577359820735 0.0 28 0.0 0.0 0.0 5.061560540826346 0.0 29 0.0 0.0 0.0 5.18140846488909 0.0 30 0.0 0.0 0.0 5.341541405443513 0.0 31 0.0 0.0 0.0 5.469572223481129 0.0 32 0.0 0.0 0.0 5.604401138051716 0.0 33 0.0 0.0 0.0 5.730291814588211 0.0 34 0.0 0.0 0.0 5.8692751214845025 0.0 35 0.0 0.0 0.0 6.035828486542287 0.0 36 0.0 0.0 0.0 6.16612533675756 0.0 37 0.0 0.0 0.0 6.301080142004683 0.0 38 0.0 0.0 0.0 6.477704761185387 0.0 39 0.0 0.0 0.0 6.770274693456202 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTTAG 25 3.889713E-5 45.000004 1 CGCATCG 20 7.0319686E-4 45.0 21 CGTTAGT 20 7.0319686E-4 45.0 28 GCGATAT 85 0.0 42.35294 9 TACGTAG 60 3.6379788E-12 41.249996 1 CGTTTTT 4020 0.0 40.80224 1 CGTTAGG 105 0.0 40.714287 2 CTACGAA 40 3.4564255E-7 39.375 11 ACACGAC 375 0.0 39.0 26 GGTACCT 470 0.0 38.776596 8 GGGCGAT 1890 0.0 38.57143 7 TTAACGG 70 0.0 38.571426 2 TAGGGAC 475 0.0 38.36842 5 CACGACC 390 0.0 38.076923 27 GCGATTC 65 9.094947E-12 38.07692 9 GTTGATC 470 0.0 37.81915 16 AACGGGA 245 0.0 37.65306 4 TAGACGG 60 1.546141E-10 37.499996 2 TAGTTCG 30 1.1396045E-4 37.499996 1 CGAATAT 30 1.1396045E-4 37.499996 14 >>END_MODULE