SRR1547132_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547132_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	909773
Sequences flagged as poor quality	0
Sequence length	51
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4632	0.5091379937632794	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACGTTAC	20	7.032511E-4	45.0	45
CCCCGAT	40	6.8121153E-9	45.0	40
GTATGCG	35	1.2115561E-7	45.0	1
TTACGTA	20	7.032511E-4	45.0	36
ATACGTC	20	7.032511E-4	45.0	42
CGTTTTT	2815	0.0	41.4032	1
CGTAAGG	120	0.0	41.249996	2
CATAGCG	55	6.002665E-11	40.909092	1
TCGATAC	50	1.0804797E-9	40.5	25
GTGTACG	50	1.0804797E-9	40.5	1
CTCGATA	50	1.0804797E-9	40.5	24
TAACGGG	195	0.0	40.384617	3
CGGTCTA	90	0.0	40.0	31
CATACGA	175	0.0	39.857143	18
AGGGCGA	1025	0.0	39.512196	6
TTGTACG	40	3.4571713E-7	39.375	1
CGTACAT	40	3.4571713E-7	39.375	35
CCGGTAT	40	3.4571713E-7	39.375	42
TGTACGG	160	0.0	39.375	2
TACGATC	35	6.2468553E-6	38.571426	11