##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547132_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 909773 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.376746726930783 31.0 31.0 33.0 30.0 34.0 2 31.73951414253885 31.0 31.0 34.0 30.0 34.0 3 31.869321248267426 31.0 31.0 34.0 30.0 34.0 4 35.6293976629335 37.0 35.0 37.0 33.0 37.0 5 35.55058349720205 37.0 35.0 37.0 33.0 37.0 6 35.59246757158104 37.0 35.0 37.0 33.0 37.0 7 35.959223894312096 37.0 35.0 37.0 35.0 37.0 8 34.63759421306194 37.0 35.0 37.0 33.0 37.0 9 36.94028070738525 39.0 37.0 39.0 33.0 39.0 10 36.828171422981335 39.0 37.0 39.0 32.0 39.0 11 36.726131683397945 39.0 35.0 39.0 32.0 39.0 12 36.32417756956955 38.0 35.0 39.0 32.0 39.0 13 36.175254706393794 39.0 35.0 39.0 32.0 39.0 14 37.16381668833874 39.0 35.0 41.0 32.0 41.0 15 37.37135197461345 39.0 35.0 41.0 32.0 41.0 16 37.443310584068776 39.0 35.0 41.0 32.0 41.0 17 37.34813519416382 39.0 35.0 41.0 32.0 41.0 18 37.30141255016361 39.0 35.0 41.0 32.0 41.0 19 37.24973812148745 39.0 35.0 41.0 32.0 41.0 20 37.12957408056735 39.0 35.0 41.0 32.0 41.0 21 37.02763436593524 39.0 35.0 41.0 32.0 41.0 22 36.94113146905877 39.0 35.0 41.0 31.0 41.0 23 36.8740949665466 38.0 35.0 41.0 31.0 41.0 24 36.727005527752524 38.0 35.0 41.0 31.0 41.0 25 36.62286856171814 38.0 35.0 41.0 31.0 41.0 26 36.4834568623162 38.0 35.0 40.0 31.0 41.0 27 36.38020693073987 38.0 35.0 40.0 30.0 41.0 28 36.41301401558411 38.0 35.0 40.0 31.0 41.0 29 36.377953621397864 38.0 35.0 40.0 30.0 41.0 30 36.297979825736746 38.0 35.0 40.0 30.0 41.0 31 36.21291794766387 38.0 35.0 40.0 30.0 41.0 32 36.14144627286147 38.0 35.0 40.0 30.0 41.0 33 36.02490181616733 38.0 35.0 41.0 30.0 41.0 34 35.867003087583385 38.0 35.0 41.0 29.0 41.0 35 35.76502929851732 38.0 35.0 41.0 29.0 41.0 36 35.63973320817391 38.0 35.0 40.0 29.0 41.0 37 35.6063644447571 38.0 35.0 40.0 29.0 41.0 38 35.49106425448986 38.0 34.0 40.0 28.0 41.0 39 35.39832133949897 38.0 34.0 40.0 27.0 41.0 40 35.24571294157993 37.0 34.0 40.0 27.0 41.0 41 35.12868814528459 37.0 34.0 40.0 27.0 41.0 42 35.060060036954276 37.0 34.0 40.0 27.0 41.0 43 34.96261265172741 37.0 34.0 40.0 26.0 41.0 44 34.83704946178882 37.0 34.0 40.0 26.0 41.0 45 34.70482526960022 36.0 34.0 40.0 26.0 41.0 46 34.64053340778414 36.0 34.0 40.0 26.0 41.0 47 34.54802022042861 36.0 34.0 40.0 26.0 41.0 48 34.470041427916634 36.0 34.0 40.0 25.0 41.0 49 34.38939713532936 36.0 34.0 40.0 25.0 41.0 50 34.27843538992694 35.0 33.0 40.0 25.0 41.0 51 33.91206158019638 35.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 1.0 12 0.0 13 5.0 14 19.0 15 33.0 16 94.0 17 198.0 18 409.0 19 886.0 20 1436.0 21 2304.0 22 3411.0 23 4848.0 24 6753.0 25 9587.0 26 12505.0 27 14904.0 28 16646.0 29 19051.0 30 23096.0 31 27827.0 32 34336.0 33 43785.0 34 72390.0 35 104982.0 36 73737.0 37 96049.0 38 134222.0 39 206125.0 40 132.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.009062700256 23.254152409447194 28.09810798957542 13.63867690072139 2 31.367604886053996 25.680581859430866 29.11704348227525 13.834769772239888 3 29.18563202029517 26.084748613115575 30.47936133519021 14.25025803139904 4 25.804568832005348 28.619226993986413 30.250073369950524 15.326130804057717 5 23.23722510999997 32.05711754470621 29.649813744747316 15.05584360054651 6 22.09782000564976 41.189395596483955 25.903934278111134 10.808850119755148 7 87.47390832658256 4.104430445836489 6.600657526657748 1.8210037009231974 8 84.89612243933377 6.098774089800423 6.113393121141208 2.8917103497246015 9 81.9335152834828 5.335506769271016 9.024998543592742 3.705979403653439 10 45.47431062473826 25.839192853601944 14.6882793839782 13.998217137681598 11 37.89022096720831 23.661396853940488 21.677055705104458 16.771326473746747 12 33.28830378566961 20.621737510345987 26.706991744094406 19.382966959889995 13 25.287956446278358 27.891902705400142 28.17351141438579 18.64662943393572 14 21.208147526910558 29.420086109392123 29.888774452528267 19.48299191116905 15 19.95244967700734 22.71522676535795 37.66510986806599 19.667213689568715 16 23.492013941939362 20.277365892370955 35.686924100847136 20.54369606484255 17 22.984524711109255 21.526688525599244 28.112287350800695 27.37649941249081 18 25.57440152653464 22.10254645939152 30.49804731509948 21.82500469897436 19 28.413351462397763 25.34577306646823 24.750679565122287 21.49019590601172 20 30.43660341645663 24.52633788868212 24.006208142031035 21.03085055283021 21 26.78822079793531 26.386692064943674 26.073537025170012 20.751550111951005 22 25.978678197748227 23.26745243044144 25.895250793329765 24.858618578480566 23 24.303644975175125 26.469130211602238 25.59297758891504 23.634247224307604 24 24.48116178431323 23.600282707884272 30.930023203590345 20.98853230421215 25 24.461046876528542 23.75185898020715 28.0340260702395 23.75306807302481 26 21.932943712332637 27.064883218121444 26.717214074280065 24.28495899526585 27 22.64696797992466 25.543294865862144 27.465532610882054 24.344204543331138 28 21.2916848488579 26.309859712257893 29.65234184791151 22.746113590972694 29 22.714347425126928 24.466432835443566 29.20299898985791 23.616220749571596 30 24.314636728062936 25.076035450601413 28.539866538136437 22.069461283199214 31 27.829579466526265 24.899288064165457 24.51545605332319 22.75567641598509 32 29.853490925758404 23.6101752854833 24.70693238862881 21.829401400129484 33 27.641070904500353 24.0816115668414 23.849685580908645 24.427631947749603 34 23.16874648950892 24.669340593752505 27.85442082805271 24.30749208868586 35 22.942646132606708 25.015580809718468 28.22770075612268 23.814072301552144 36 26.83735393334381 26.27127865962169 24.480392361611084 22.410975045423417 37 23.302735957211304 27.860356374612127 26.1398172950835 22.69709037309307 38 23.751529227620516 28.335529851952078 24.955126168835523 22.957814751591883 39 23.22656310969879 26.6774239288262 25.197933990127208 24.898078971347797 40 25.70113643733107 24.365088873817975 26.274356350430274 23.659418338420682 41 21.848966720269782 23.813632631436633 27.36078120586124 26.97661944243234 42 23.54730245896504 25.33599040639808 25.480971626988268 25.63573550764861 43 23.15225886017721 24.08688760822755 27.311648070452737 25.449205461142505 44 23.370884825115716 25.29872836410841 27.03993193906612 24.29045487170976 45 22.033408333727206 26.757443889849448 25.254321682441667 25.954826093981687 46 24.013132946350353 26.149160285038135 26.207306657814645 23.63040011079687 47 22.717315198406634 25.56483870152225 27.75780332016888 23.96004277990224 48 23.41012538292519 23.89980797407705 28.588889756016062 24.101176886981698 49 23.252723481571778 23.35296826790859 28.671327902674626 24.72298034784501 50 22.263245886611273 26.072437849881236 28.09667906170001 23.567637201807486 51 21.19385824815641 26.92221026563769 26.66302473254317 25.220906753662724 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 846.0 1 1207.5 2 1569.0 3 4841.0 4 8113.0 5 5620.5 6 3128.0 7 3183.0 8 3238.0 9 3560.0 10 3882.0 11 4018.0 12 4154.0 13 4186.0 14 4218.0 15 3987.5 16 3757.0 17 3834.0 18 3911.0 19 3696.0 20 3481.0 21 3602.0 22 3723.0 23 3624.0 24 3525.0 25 3828.0 26 4972.5 27 5814.0 28 5969.5 29 6125.0 30 7524.0 31 8923.0 32 10611.5 33 12300.0 34 15136.0 35 17972.0 36 19016.5 37 20061.0 38 23353.0 39 26645.0 40 32729.5 41 38814.0 42 44259.0 43 49704.0 44 53428.5 45 57153.0 46 61291.5 47 65430.0 48 69095.0 49 72760.0 50 69560.5 51 66361.0 52 64188.5 53 62016.0 54 59125.0 55 56234.0 56 55120.0 57 54006.0 58 52969.0 59 51932.0 60 49196.5 61 46461.0 62 43665.0 63 40869.0 64 35955.0 65 31041.0 66 26820.0 67 22599.0 68 18855.0 69 15111.0 70 13187.0 71 11263.0 72 9485.0 73 7707.0 74 6269.0 75 3926.0 76 3021.0 77 2247.0 78 1473.0 79 1145.5 80 818.0 81 588.5 82 359.0 83 271.5 84 184.0 85 123.5 86 63.0 87 44.0 88 25.0 89 19.0 90 13.0 91 10.5 92 8.0 93 4.0 94 0.0 95 0.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 909773.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.5919066725123 #Duplication Level Percentage of deduplicated Percentage of total 1 75.21113061904991 21.504296273940074 2 6.469275613954034 3.6993784918586696 3 2.8206810461149936 2.419459476703328 4 1.7642176601749766 2.0176938675888385 5 1.3394139986339753 1.9148200022399569 6 1.0891680518621745 1.86848347737152 7 0.8579890792823017 1.7172080576612028 8 0.7404706558664068 1.6937174309013026 9 0.6502297631609224 1.6732177833588184 >10 8.759215003637548 54.39229175156524 >50 0.26648419958295066 4.607176849870935 >100 0.028551877811830245 1.490410453486145 >500 0.0027758770094834942 0.4766592275736593 >1k 3.96553858497642E-4 0.5251868558803973 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4632 0.5091379937632794 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.1983505775616556E-4 0.0 0.0 0.05363975409250439 0.0 2 2.1983505775616556E-4 0.0 0.0 0.1831226031108859 0.0 3 2.1983505775616556E-4 0.0 0.0 0.28380705956320973 0.0 4 2.1983505775616556E-4 0.0 0.0 0.5355182006940192 0.0 5 2.1983505775616556E-4 0.0 0.0 0.8946187675387157 0.0 6 2.1983505775616556E-4 0.0 0.0 1.5852306014797097 0.0 7 2.1983505775616556E-4 0.0 0.0 1.910806322016591 0.0 8 2.1983505775616556E-4 0.0 0.0 2.7978407800627187 0.0 9 2.1983505775616556E-4 0.0 0.0 3.215967059914946 0.0 10 2.1983505775616556E-4 0.0 0.0 3.817655612993571 0.0 11 2.1983505775616556E-4 0.0 0.0 4.311734905300553 0.0 12 2.1983505775616556E-4 0.0 0.0 4.706998339146138 0.0 13 2.1983505775616556E-4 0.0 0.0 4.915072221312349 0.0 14 2.1983505775616556E-4 0.0 0.0 5.0192740386887715 0.0 15 2.1983505775616556E-4 0.0 0.0 5.1092964948399215 0.0 16 2.1983505775616556E-4 0.0 0.0 5.282966190467293 0.0 17 2.1983505775616556E-4 0.0 0.0 5.453887947872711 0.0 18 2.1983505775616556E-4 0.0 0.0 5.691639562836004 0.0 19 2.1983505775616556E-4 0.0 0.0 5.8145273601217005 0.0 20 2.1983505775616556E-4 0.0 0.0 5.9522540238059385 0.0 21 2.1983505775616556E-4 0.0 0.0 6.125703884375553 0.0 22 2.1983505775616556E-4 0.0 0.0 6.317509972267808 0.0 23 2.1983505775616556E-4 0.0 0.0 6.5250342667896275 0.0 24 2.1983505775616556E-4 0.0 0.0 6.687932044586947 0.0 25 2.1983505775616556E-4 0.0 0.0 6.830165326955186 0.0 26 2.1983505775616556E-4 0.0 0.0 6.965473805004105 0.0 27 2.1983505775616556E-4 0.0 0.0 7.109905437949906 0.0 28 2.1983505775616556E-4 0.0 0.0 7.249500699625071 0.0 29 2.1983505775616556E-4 0.0 0.0 7.413607570240049 0.0 30 2.1983505775616556E-4 0.0 0.0 7.644654215941779 0.0 31 2.1983505775616556E-4 0.0 0.0 7.816235478520466 0.0 32 2.1983505775616556E-4 0.0 0.0 7.99946799916023 0.0 33 2.1983505775616556E-4 0.0 0.0 8.172917859729845 0.0 34 2.1983505775616556E-4 0.0 0.0 8.356480132956243 0.0 35 2.1983505775616556E-4 0.0 0.0 8.58532842808041 0.0 36 2.1983505775616556E-4 0.0 0.0 8.762075814516368 0.0 37 2.1983505775616556E-4 0.0 0.0 8.946297592916036 0.0 38 2.1983505775616556E-4 0.0 0.0 9.168111166192006 0.0 39 2.1983505775616556E-4 0.0 0.0 9.556339878189394 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGTTAC 20 7.032511E-4 45.0 45 CCCCGAT 40 6.8121153E-9 45.0 40 GTATGCG 35 1.2115561E-7 45.0 1 TTACGTA 20 7.032511E-4 45.0 36 ATACGTC 20 7.032511E-4 45.0 42 CGTTTTT 2815 0.0 41.4032 1 CGTAAGG 120 0.0 41.249996 2 CATAGCG 55 6.002665E-11 40.909092 1 TCGATAC 50 1.0804797E-9 40.5 25 GTGTACG 50 1.0804797E-9 40.5 1 CTCGATA 50 1.0804797E-9 40.5 24 TAACGGG 195 0.0 40.384617 3 CGGTCTA 90 0.0 40.0 31 CATACGA 175 0.0 39.857143 18 AGGGCGA 1025 0.0 39.512196 6 TTGTACG 40 3.4571713E-7 39.375 1 CGTACAT 40 3.4571713E-7 39.375 35 CCGGTAT 40 3.4571713E-7 39.375 42 TGTACGG 160 0.0 39.375 2 TACGATC 35 6.2468553E-6 38.571426 11 >>END_MODULE