##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547131_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1198730 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.427570845811818 31.0 31.0 33.0 30.0 34.0 2 31.80184695469372 31.0 31.0 34.0 30.0 34.0 3 31.93566691415081 33.0 31.0 34.0 30.0 34.0 4 35.682052672411636 37.0 35.0 37.0 33.0 37.0 5 35.622539687836294 37.0 35.0 37.0 33.0 37.0 6 35.6678192753998 37.0 35.0 37.0 33.0 37.0 7 36.021156557356534 37.0 35.0 37.0 35.0 37.0 8 34.722226022540525 37.0 35.0 37.0 33.0 37.0 9 37.046853753555844 39.0 37.0 39.0 34.0 39.0 10 36.81314891593603 39.0 37.0 39.0 32.0 39.0 11 36.81185421237476 39.0 37.0 39.0 32.0 39.0 12 36.577932478539786 39.0 35.0 39.0 32.0 39.0 13 36.50413604397988 39.0 35.0 39.0 32.0 39.0 14 37.601316393182785 40.0 36.0 41.0 33.0 41.0 15 37.735275666747306 40.0 36.0 41.0 33.0 41.0 16 37.757834541556484 40.0 36.0 41.0 33.0 41.0 17 37.64156815963561 40.0 36.0 41.0 33.0 41.0 18 37.60556839321615 39.0 36.0 41.0 33.0 41.0 19 37.581406154847215 39.0 36.0 41.0 33.0 41.0 20 37.47564505768605 39.0 35.0 41.0 32.0 41.0 21 37.376770415356255 39.0 35.0 41.0 32.0 41.0 22 37.298289022548865 39.0 35.0 41.0 32.0 41.0 23 37.220052055091635 39.0 35.0 41.0 32.0 41.0 24 37.09607000742452 39.0 35.0 41.0 32.0 41.0 25 36.997517372552615 39.0 35.0 41.0 31.0 41.0 26 36.89768922109232 39.0 35.0 41.0 31.0 41.0 27 36.817552743320014 39.0 35.0 41.0 31.0 41.0 28 36.845121086483196 39.0 35.0 41.0 31.0 41.0 29 36.80386742635957 39.0 35.0 41.0 31.0 41.0 30 36.74919289581474 39.0 35.0 41.0 31.0 41.0 31 36.6542057010336 39.0 35.0 41.0 31.0 41.0 32 36.58491069715449 39.0 35.0 41.0 31.0 41.0 33 36.48382371343005 39.0 35.0 41.0 30.0 41.0 34 36.36534332168211 39.0 35.0 41.0 30.0 41.0 35 36.24906359230185 39.0 35.0 41.0 30.0 41.0 36 36.12658063116799 39.0 35.0 41.0 30.0 41.0 37 36.085105903748136 39.0 35.0 41.0 30.0 41.0 38 35.96389261968917 38.0 35.0 41.0 29.0 41.0 39 35.892268484145724 38.0 35.0 41.0 29.0 41.0 40 35.748708216195475 38.0 35.0 41.0 28.0 41.0 41 35.675766019036814 38.0 35.0 40.0 28.0 41.0 42 35.60949922000784 38.0 35.0 40.0 28.0 41.0 43 35.518327730181106 38.0 35.0 40.0 28.0 41.0 44 35.39806461838779 38.0 34.0 40.0 27.0 41.0 45 35.27937316993818 38.0 34.0 40.0 27.0 41.0 46 35.20293226998574 38.0 34.0 40.0 27.0 41.0 47 35.12476621090654 37.0 34.0 40.0 27.0 41.0 48 35.0481542966306 37.0 34.0 40.0 26.0 41.0 49 34.97625570395335 37.0 34.0 40.0 26.0 41.0 50 34.862834833532155 37.0 34.0 40.0 26.0 41.0 51 34.50766978385458 36.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 5.0 12 3.0 13 5.0 14 13.0 15 29.0 16 72.0 17 200.0 18 472.0 19 864.0 20 1564.0 21 2507.0 22 3808.0 23 5505.0 24 7954.0 25 11473.0 26 15236.0 27 17704.0 28 19888.0 29 22552.0 30 26700.0 31 32691.0 32 40202.0 33 51607.0 34 83238.0 35 124249.0 36 93164.0 37 123330.0 38 186732.0 39 326736.0 40 225.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.60393082679168 24.143718769030556 27.207461229801538 13.044889174376214 2 31.87014590441551 25.24688628798812 28.684941563154336 14.198026244442035 3 30.28471799320948 25.811483820376562 30.52588990014432 13.377908286269635 4 25.295521093156925 29.069181550474255 29.94360698405813 15.691690372310696 5 22.791871397228732 32.82165291600277 29.6670643097278 14.7194113770407 6 21.197600794173834 41.12076948103409 26.965872214760623 10.71575751003145 7 89.65004629899977 3.2468529193396343 5.741159393691657 1.3619413879689337 8 87.58944883334863 5.406305006131489 5.057185521343422 1.9470606391764618 9 85.2658229960041 4.071308801815254 7.703319346308176 2.9595488558724647 10 37.75061940553753 26.86401441525615 20.058228291608618 15.327137887597708 11 33.36481109173876 26.29157525047342 22.341561485905917 18.002052171881907 12 29.866024876327447 24.64800246927999 25.77853227999633 19.70744037439624 13 23.691990690147072 30.63475511583092 27.313239845503155 18.36001434851885 14 21.92854103926656 31.55756508971995 27.90202964804418 18.61186422296931 15 21.470222652307026 24.661767036780592 34.57492512909496 19.293085181817425 16 22.826741634896933 23.30791754606959 34.11377040701409 19.751570412019387 17 21.99861520108782 23.531320647685465 28.55997597457309 25.910088176653623 18 24.443702918922526 23.67105186322191 30.698572656060996 21.186672561794566 19 26.899468604272858 26.956445571563236 25.321632060597466 20.822453763566443 20 29.584310061481734 25.509163865090557 24.841206944015752 20.06531912941196 21 25.615276167277035 27.47924887172257 26.9615342904574 19.943940670542993 22 25.14736429387769 23.689988571237894 26.94676866350221 24.21587847138221 23 22.912248796643116 28.304288705546703 26.33829135835426 22.445171139455926 24 22.42172966389429 26.435143860585786 31.628139781268512 19.514986694251416 25 22.80880598633554 26.400023358053943 29.706439314941647 21.084731340668874 26 21.92195073119051 29.106888123263786 26.681988437763298 22.289172707782402 27 21.824847964095333 27.456558190751878 27.832873124056295 22.885720721096494 28 19.83165516838654 28.416907894188014 30.554837202706196 21.196599734719246 29 21.074971010986626 26.117974856723364 30.298649403952517 22.508404728337492 30 22.872456683323183 26.40044046616002 30.17326670726519 20.55383614325161 31 26.049902813811283 27.083079592568804 26.24243991557732 20.624577678042595 32 25.763516388177486 26.351889082612434 26.572372427485757 21.312222101724327 33 24.74218547963261 26.542590908711723 25.371351346842076 23.343872264813594 34 21.344673112377265 27.975190409850427 28.229042403210062 22.451094074562246 35 21.51602112235449 27.892853269710443 28.411318645566556 22.179806962368506 36 25.965730398004556 29.114312647551994 24.757535057936316 20.162421896507137 37 22.41088485313624 29.757993876853 25.80330850149742 22.027812768513343 38 23.041635731148798 30.09993910221651 25.765184820601807 21.093240346032886 39 22.96263545585745 28.979419886046067 24.717826366237603 23.340118291858882 40 24.884669608669174 26.415623201221294 26.61049610838137 22.089211081728163 41 21.060038540789 26.666638859459596 26.99048159301928 25.282841006732127 42 23.716099538678435 27.859234356360478 24.94164657595956 23.483019529001524 43 22.65572731140457 26.09828735411644 27.256012613349128 23.989972721129863 44 22.627530803433636 27.13755391122271 27.6458418492905 22.589073436053155 45 21.642738564981272 28.4231645157792 25.879305598425002 24.054791320814527 46 23.178363768321475 28.15087634413087 26.451577919965295 22.219181967582358 47 22.746740300150993 27.940570437045874 27.328589423806864 21.984099838996272 48 23.273380994886256 27.06756317102267 28.021155723140325 21.637900110950756 49 23.129728963152672 26.136828143118134 28.516513309919667 22.21692958380953 50 21.917279120402426 28.21244150058812 28.218114170830795 21.652165208178655 51 21.475561636064835 28.46037055884144 27.03044054958164 23.033627255512084 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1015.0 1 1265.5 2 1516.0 3 5055.0 4 8594.0 5 6291.5 6 3989.0 7 4131.0 8 4273.0 9 4605.5 10 4938.0 11 4983.5 12 5029.0 13 5163.5 14 5298.0 15 5121.0 16 4944.0 17 4828.5 18 4713.0 19 4682.0 20 4651.0 21 4786.5 22 4922.0 23 4874.5 24 4827.0 25 5826.0 26 7715.5 27 8606.0 28 10292.5 29 11979.0 30 14094.5 31 16210.0 32 19308.0 33 22406.0 34 25957.5 35 29509.0 36 33139.5 37 36770.0 38 42017.5 39 47265.0 40 54945.5 41 62626.0 42 71495.5 43 80365.0 44 83803.0 45 87241.0 46 91476.5 47 95712.0 48 98646.0 49 101580.0 50 100726.0 51 99872.0 52 95290.5 53 90709.0 54 81987.0 55 73265.0 56 68417.5 57 63570.0 58 57857.0 59 52144.0 60 47104.5 61 42065.0 62 37645.0 63 33225.0 64 29308.5 65 25392.0 66 21007.5 67 16623.0 68 13883.0 69 11143.0 70 9628.0 71 8113.0 72 7451.5 73 6790.0 74 5753.0 75 3871.5 76 3027.0 77 2158.0 78 1289.0 79 902.5 80 516.0 81 386.0 82 256.0 83 168.5 84 81.0 85 67.5 86 54.0 87 59.5 88 65.0 89 36.5 90 8.0 91 4.0 92 0.0 93 1.0 94 2.0 95 1.5 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1198730.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.323395549476185 #Duplication Level Percentage of deduplicated Percentage of total 1 75.47975433811524 19.11403675081383 2 6.181989670037234 3.1309793939425727 3 2.6305829679612613 1.9984587907019415 4 1.6566393994619228 1.6780693918168383 5 1.2677020454806107 1.6051260168292776 6 0.9790065248646646 1.4875061684799593 7 0.8428073299039697 1.4939920371009268 8 0.7092805913376612 1.4369114376007974 9 0.6382853139116182 1.4547196329844936 >10 8.80084361846366 51.817108815454674 >50 0.7627988865411259 11.933457514795032 >100 0.04724996375017558 2.005521208458343 >500 0.002379494577341697 0.37359267081711617 >1k 6.798555935261992E-4 0.47052017020422965 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4414 0.36822303604648254 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.03144995119835159 0.0 2 0.0 0.0 0.0 0.0934322157616811 0.0 3 0.0 0.0 0.0 0.1530786749309686 0.0 4 0.0 0.0 0.0 0.28321640402759585 0.0 5 0.0 0.0 0.0 0.4625728896415373 0.0 6 0.0 0.0 0.0 0.9212249630859326 0.0 7 0.0 0.0 0.0 1.12402292426151 0.0 8 0.0 0.0 0.0 1.6361482569052248 0.0 9 0.0 0.0 0.0 1.8929200070074161 0.0 10 0.0 0.0 0.0 2.2744905024484248 0.0 11 0.0 0.0 0.0 2.59157608468963 0.0 12 0.0 0.0 0.0 2.8580247428528525 0.0 13 0.0 0.0 0.0 3.0156916069506896 0.0 14 0.0 0.0 0.0 3.086266298499245 0.0 15 0.0 0.0 0.0 3.152753330608227 0.0 16 0.0 0.0 0.0 3.274715740825707 0.0 17 0.0 0.0 0.0 3.400682388861545 0.0 18 0.0 0.0 0.0 3.575867793414697 0.0 19 0.0 0.0 0.0 3.6657128794640994 0.0 20 0.0 0.0 0.0 3.7583108790136226 0.0 21 0.0 0.0 0.0 3.8808572405796133 0.0 22 0.0 0.0 0.0 4.024342429070766 0.0 23 0.0 0.0 0.0 4.175001876986477 0.0 24 0.0 0.0 0.0 4.305473292567968 0.0 25 0.0 0.0 0.0 4.420094600118459 0.0 26 0.0 0.0 0.0 4.528292442835334 0.0 27 0.0 0.0 0.0 4.6367405504158565 0.0 28 0.0 0.0 0.0 4.752362917420937 0.0 29 0.0 0.0 0.0 4.87349111142626 0.0 30 0.0 0.0 0.0 5.0384990781910854 0.0 31 0.0 0.0 0.0 5.165466785681513 0.0 32 0.0 0.0 0.0 5.3147914876577715 0.0 33 0.0 0.0 0.0 5.456357978860961 0.0 34 8.342162121578671E-5 0.0 0.0 5.599676324109683 0.0 35 8.342162121578671E-5 0.0 0.0 5.753922901737672 0.0 36 8.342162121578671E-5 0.0 0.0 5.892152528092231 0.0 37 8.342162121578671E-5 0.0 0.0 6.036805619280405 0.0 38 8.342162121578671E-5 0.0 0.0 6.2082370508788465 0.0 39 8.342162121578671E-5 0.0 0.0 6.435143860585787 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATATCGC 25 3.8909056E-5 45.0 10 ATATACG 25 3.8909056E-5 45.0 1 CGGTCTA 85 0.0 45.0 31 CATACGA 220 0.0 42.954544 18 CGTTAGG 135 0.0 41.666664 2 ATACGAA 230 0.0 41.086956 19 GCGTAAG 110 0.0 40.909092 1 CGTTTTT 3655 0.0 40.752396 1 CTTAACG 40 3.45839E-7 39.375 1 ATTGGGC 500 0.0 38.7 4 AGGGCGA 1375 0.0 38.618183 6 GTTAGCG 105 0.0 38.57143 1 GTAGGGT 790 0.0 38.449368 4 GCGTTAG 100 0.0 38.25 1 GGGCGAT 2695 0.0 38.15399 7 AGGGTAC 785 0.0 37.834393 6 GCGGGTC 250 0.0 37.800003 5 TAGGGTC 640 0.0 37.617188 5 ACGGGAT 260 0.0 37.211536 5 TTACGGG 230 0.0 37.173912 3 >>END_MODULE