##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547130_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1205928 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.5262254462953 31.0 31.0 33.0 30.0 34.0 2 31.89458491717582 31.0 31.0 34.0 30.0 34.0 3 31.985705614265527 33.0 31.0 34.0 30.0 34.0 4 35.75304744561864 37.0 35.0 37.0 35.0 37.0 5 35.690214507002075 37.0 35.0 37.0 33.0 37.0 6 35.74300206977531 37.0 35.0 37.0 33.0 37.0 7 36.069307620355445 37.0 35.0 37.0 35.0 37.0 8 34.74827104105718 37.0 35.0 37.0 33.0 37.0 9 37.06292995933422 39.0 37.0 39.0 34.0 39.0 10 37.00438998016465 39.0 37.0 39.0 32.0 39.0 11 36.918000908843645 39.0 37.0 39.0 33.0 39.0 12 36.62413095972562 39.0 35.0 39.0 33.0 39.0 13 36.56974960362476 39.0 35.0 39.0 33.0 39.0 14 37.652274430977634 40.0 36.0 41.0 33.0 41.0 15 37.79493220159081 40.0 36.0 41.0 33.0 41.0 16 37.81450385097618 40.0 36.0 41.0 33.0 41.0 17 37.69949698489462 40.0 36.0 41.0 33.0 41.0 18 37.62146662155618 39.0 36.0 41.0 33.0 41.0 19 37.55823979541067 39.0 36.0 41.0 33.0 41.0 20 37.433331840706906 39.0 35.0 41.0 32.0 41.0 21 37.35289503187587 39.0 35.0 41.0 32.0 41.0 22 37.27601316164812 39.0 35.0 41.0 32.0 41.0 23 37.188560179380524 39.0 35.0 41.0 32.0 41.0 24 37.05083470986659 39.0 35.0 41.0 32.0 41.0 25 36.94631686137149 39.0 35.0 41.0 32.0 41.0 26 36.82988039086911 38.0 35.0 41.0 31.0 41.0 27 36.72145600732382 38.0 35.0 41.0 31.0 41.0 28 36.74214215110687 38.0 35.0 41.0 31.0 41.0 29 36.69244764198194 38.0 35.0 41.0 31.0 41.0 30 36.61603760755202 38.0 35.0 41.0 31.0 41.0 31 36.503875853284775 38.0 35.0 41.0 31.0 41.0 32 36.423333731367045 38.0 35.0 41.0 30.0 41.0 33 36.274349712420644 38.0 35.0 41.0 30.0 41.0 34 36.06777684903245 38.0 35.0 41.0 30.0 41.0 35 35.904716533657066 38.0 35.0 41.0 29.0 41.0 36 35.78951894308781 38.0 35.0 41.0 29.0 41.0 37 35.76749855712779 38.0 35.0 41.0 29.0 41.0 38 35.660561824586544 38.0 35.0 40.0 29.0 41.0 39 35.55870997273469 38.0 35.0 40.0 28.0 41.0 40 35.404576392620456 38.0 35.0 40.0 27.0 41.0 41 35.303732063605786 38.0 34.0 40.0 27.0 41.0 42 35.230588393336916 38.0 34.0 40.0 27.0 41.0 43 35.145152944454395 37.0 34.0 40.0 27.0 41.0 44 35.02526353148778 37.0 34.0 40.0 26.0 41.0 45 34.90621911092536 37.0 34.0 40.0 26.0 41.0 46 34.82223897280766 37.0 34.0 40.0 26.0 41.0 47 34.74426665605243 37.0 34.0 40.0 25.0 41.0 48 34.65605906820308 36.0 34.0 40.0 25.0 41.0 49 34.57425733542964 36.0 34.0 40.0 26.0 41.0 50 34.49298299732654 36.0 34.0 40.0 25.0 41.0 51 34.13445164222076 35.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 1.0 10 0.0 11 0.0 12 4.0 13 4.0 14 19.0 15 35.0 16 87.0 17 220.0 18 466.0 19 857.0 20 1541.0 21 2387.0 22 3780.0 23 5464.0 24 8351.0 25 12231.0 26 16720.0 27 19609.0 28 21088.0 29 23274.0 30 27203.0 31 32750.0 32 40922.0 33 53732.0 34 89888.0 35 125576.0 36 101022.0 37 131464.0 38 185554.0 39 301480.0 40 198.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.12848859965106 23.146572598032385 27.54584021599963 15.179098586316927 2 33.75574661173801 24.763335787874567 27.972150907848565 13.50876669253886 3 29.09601568252831 25.4972104470582 31.66598669240618 13.740787178007311 4 26.35124153349122 28.266530008425043 30.072110441087695 15.310118016996038 5 23.204702104934956 31.706868071725676 29.918369919265498 15.170059904073874 6 22.000898892802887 40.021875269502 27.531826112338383 10.445399725356738 7 86.72764874851566 3.5030283731698737 7.981985657518526 1.7873372207959346 8 84.12915198917348 5.828540344033806 7.667290252817748 2.375017413974964 9 81.26828467371186 5.063154682534944 10.029039876344193 3.639520767409 10 43.07678402027319 27.395002023338044 15.974502623705561 13.55371133268321 11 33.95932427143246 25.235005738319373 24.215376042350787 16.590293947897386 12 29.645799749238762 22.25058212430593 29.065250993425813 19.038367133029503 13 24.43794322712467 26.543375723923816 30.496099269608134 18.522581779343376 14 21.127380739148606 27.648582668285336 31.882251676717015 19.34178491584904 15 20.73946371591007 23.133802349725688 36.84332729648868 19.28340663787556 16 24.04803603531886 21.780404800286586 34.30967686296363 19.86188230143093 17 23.761866380082395 21.945008325538506 29.736020724288682 24.55710457009042 18 25.374566309099716 22.34229572578131 31.43935624680744 20.84378171831154 19 27.805225519268152 24.523354628137003 27.125582953542832 20.545836899052016 20 29.160530313584225 24.41580260181371 26.488977783084895 19.93468930151717 21 27.05493196940448 25.135994852097305 27.9063924214381 19.902680757060125 22 26.05951599100444 22.714871866313743 27.985667469367986 23.239944673313833 23 24.35692678169841 25.07081683151896 28.022402664172326 22.549853722610305 24 24.012627619559375 23.62031564073477 31.68141049880258 20.68564624090327 25 24.23718497290054 24.734561267339345 28.76971096118508 22.25854279857504 26 22.311779807749716 26.458544788743605 28.189245129062428 23.040430274444248 27 22.08813461500189 25.446792843353833 29.308797871846416 23.156274669797867 28 21.755610616885917 26.04798959805229 30.640303567045464 21.556096218016332 29 22.81288766825217 24.322181755461354 30.608212098898107 22.256718477388368 30 24.009725290398766 24.8872237811876 30.46939784133049 20.633653087083143 31 26.36633364512641 24.760599306094562 27.694688240093935 21.178378808685096 32 27.652563005419893 24.14207150012273 27.174590854512044 21.03077463994534 33 26.684511844819923 24.42732899476586 26.556394743301425 22.331764417112794 34 23.91784584154278 25.38542931252944 29.15936938191998 21.537355464007803 35 23.552401138376418 26.245845523115808 29.019808811139637 21.181944527368135 36 26.675058544125353 26.45199381720965 26.670912359610195 20.202035279054805 37 24.395817992450628 27.530084714842012 26.980964037653987 21.09313325505337 38 24.622780132810583 27.35055492533551 26.856246807437923 21.170418134415986 39 24.38454037056939 26.88079221976768 26.1892086426387 22.545458767024236 40 25.738186691079402 24.49963845271028 27.688717734392103 22.07345712181822 41 22.01068388825867 24.724527500812652 28.41819743798966 24.846591172939014 42 23.70672212603074 25.531457931153433 26.734846524833987 24.026973417981836 43 22.92674189503851 24.399300787443362 28.549548563429987 24.12440875408814 44 23.05411268334428 25.60476247338149 28.285519533504488 23.05560530976974 45 22.76222129347689 26.26699106414313 26.943980071778746 24.026807570601232 46 23.981862930456877 25.855855407619693 27.337370058577292 22.824911603346138 47 23.182146861172477 25.59414824102268 28.740107203746824 22.48359769405802 48 23.164318267757277 24.862263750406328 29.40532104735938 22.568096934477015 49 23.28513808452909 24.77262324118853 28.9752787894468 22.96695988483558 50 22.730710291161664 26.43988695842538 28.599634472373143 22.229768278039817 51 22.17213631327907 26.424628999409585 28.119423381827108 23.283811305484242 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1029.0 1 1579.5 2 2130.0 3 9120.5 4 16111.0 5 10980.5 6 5850.0 7 5820.5 8 5791.0 9 6063.0 10 6335.0 11 6478.5 12 6622.0 13 6570.5 14 6519.0 15 6350.0 16 6181.0 17 5966.0 18 5751.0 19 5665.0 20 5579.0 21 5568.5 22 5558.0 23 5781.0 24 6004.0 25 6710.5 26 8451.5 27 9486.0 28 11140.5 29 12795.0 30 15084.0 31 17373.0 32 19570.0 33 21767.0 34 25084.5 35 28402.0 36 32607.5 37 36813.0 38 39125.5 39 41438.0 40 47873.5 41 54309.0 42 59558.5 43 64808.0 44 68895.0 45 72982.0 46 76964.0 47 80946.0 48 84059.5 49 87173.0 50 85538.0 51 83903.0 52 80501.5 53 77100.0 54 73278.5 55 69457.0 56 67594.0 57 65731.0 58 63701.0 59 61671.0 60 59230.5 61 56790.0 62 52321.5 63 47853.0 64 42978.0 65 38103.0 66 33365.0 67 28627.0 68 24339.5 69 20052.0 70 17559.0 71 15066.0 72 12800.0 73 10534.0 74 8784.0 75 5659.0 76 4284.0 77 3254.0 78 2224.0 79 1747.0 80 1270.0 81 992.5 82 715.0 83 452.0 84 189.0 85 136.0 86 83.0 87 65.5 88 48.0 89 28.0 90 8.0 91 8.5 92 9.0 93 6.5 94 4.0 95 4.0 96 4.0 97 2.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1205928.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.792725269604286 #Duplication Level Percentage of deduplicated Percentage of total 1 73.93191154603156 20.5476930625554 2 6.268299841599184 3.4842627081014035 3 2.8372843117660005 2.3656759016601216 4 1.9079592144211805 2.1210954508807154 5 1.407379023256947 1.9557449271792173 6 1.1458935732356856 1.9108503161486754 7 1.0114663776013886 1.9677985006482057 8 0.8770619563354796 1.9500753597482923 9 0.7967062768685156 1.9928374806218347 >10 9.597589119248017 56.04440384037436 >50 0.19022265906807378 3.219573039552019 >100 0.02607846248156245 1.3226166618684656 >500 0.0015340272045520906 0.23440611199387978 >1k 3.0680544091041815E-4 0.08637809801738822 >5k 3.0680544091041815E-4 0.7965885406499909 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9342 0.7746731148128246 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 8.292369030323536E-5 0.0 0.0 0.032589010289171494 0.0 2 8.292369030323536E-5 0.0 0.0 0.13483392043306067 0.0 3 8.292369030323536E-5 0.0 0.0 0.23326434082300104 0.0 4 8.292369030323536E-5 0.0 0.0 0.3869219389548961 0.0 5 8.292369030323536E-5 0.0 0.0 0.6626432092131537 0.0 6 8.292369030323536E-5 0.0 0.0 1.2065396939120743 0.0 7 8.292369030323536E-5 0.0 0.0 1.4427063638956887 0.0 8 8.292369030323536E-5 0.0 0.0 1.914625085411401 0.0 9 8.292369030323536E-5 0.0 0.0 2.201209359099382 0.0 10 8.292369030323536E-5 0.0 0.0 2.6324954723665095 0.0 11 8.292369030323536E-5 0.0 0.0 2.997774328152261 0.0 12 8.292369030323536E-5 0.0 0.0 3.2941435972960242 0.0 13 8.292369030323536E-5 0.0 0.0 3.4496255166145904 0.0 14 8.292369030323536E-5 0.0 0.0 3.533958909652981 0.0 15 8.292369030323536E-5 0.0 0.0 3.613482728653784 0.0 16 8.292369030323536E-5 0.0 0.0 3.7536237652662514 0.0 17 8.292369030323536E-5 0.0 0.0 3.901145010315707 0.0 18 8.292369030323536E-5 0.0 0.0 4.088469626710716 0.0 19 8.292369030323536E-5 0.0 0.0 4.1920413158994565 0.0 20 8.292369030323536E-5 0.0 0.0 4.30514922947307 0.0 21 8.292369030323536E-5 0.0 0.0 4.444461029182505 0.0 22 8.292369030323536E-5 0.0 0.0 4.598201551004704 0.0 23 8.292369030323536E-5 0.0 0.0 4.766453718629968 0.0 24 8.292369030323536E-5 0.0 0.0 4.903609502391519 0.0 25 8.292369030323536E-5 0.0 0.0 5.017214958106952 0.0 26 8.292369030323536E-5 0.0 0.0 5.129327787396926 0.0 27 8.292369030323536E-5 0.0 0.0 5.2562839572511795 0.0 28 8.292369030323536E-5 0.0 0.0 5.3740355974817735 0.0 29 8.292369030323536E-5 0.0 0.0 5.507791509940892 0.0 30 8.292369030323536E-5 0.0 0.0 5.688233460040732 0.0 31 8.292369030323536E-5 0.0 0.0 5.832354833787755 0.0 32 8.292369030323536E-5 0.0 0.0 5.984353958113585 0.0 33 8.292369030323536E-5 0.0 0.0 6.129885034595763 0.0 34 8.292369030323536E-5 0.0 0.0 6.280391532496136 0.0 35 8.292369030323536E-5 0.0 0.0 6.455277595345659 0.0 36 8.292369030323536E-5 0.0 0.0 6.607193795981186 0.0 37 8.292369030323536E-5 0.0 0.0 6.752724872463364 0.0 38 8.292369030323536E-5 0.0 0.0 6.935405762201392 0.0 39 8.292369030323536E-5 0.0 0.0 7.200678647481442 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAAGCGT 20 7.033425E-4 45.0 15 CGTTTTT 5165 0.0 40.68732 1 ACGGGAT 300 0.0 39.0 5 AGGGCGA 1485 0.0 38.636364 6 GTATGCG 35 6.2485433E-6 38.57143 1 AGTACGG 70 0.0 38.57143 2 GCGTTAG 100 0.0 38.25 1 GTTGATC 655 0.0 38.129772 16 TTGATCC 675 0.0 38.000004 17 AAGGGAT 1150 0.0 37.369564 5 TAGGGAT 1260 0.0 36.785713 5 GTAGCAT 655 0.0 36.755726 29 GGGCGAT 2955 0.0 36.47208 7 GCCAGTA 655 0.0 36.412212 25 AGGGATC 885 0.0 36.355934 6 CATATGC 665 0.0 36.203007 33 GACCGAT 885 0.0 36.101696 9 GCTAACG 25 0.0021071495 36.0 1 TAAGGGA 1045 0.0 35.956936 4 ATGGGAC 695 0.0 35.935253 5 >>END_MODULE