##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547126_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1294437 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.428322119964122 31.0 31.0 33.0 30.0 34.0 2 31.78623061609024 31.0 31.0 34.0 30.0 34.0 3 31.91026523500178 31.0 31.0 34.0 30.0 34.0 4 35.65009421084224 37.0 35.0 37.0 33.0 37.0 5 35.579488225382924 37.0 35.0 37.0 33.0 37.0 6 35.62139215736262 37.0 35.0 37.0 33.0 37.0 7 36.00221408998661 37.0 35.0 37.0 35.0 37.0 8 34.70048136757525 37.0 35.0 37.0 33.0 37.0 9 36.99037187595843 39.0 37.0 39.0 33.0 39.0 10 36.881962582960774 39.0 37.0 39.0 32.0 39.0 11 36.77695940397254 39.0 35.0 39.0 32.0 39.0 12 36.40699470117124 39.0 35.0 39.0 32.0 39.0 13 36.25610284625671 39.0 35.0 39.0 32.0 39.0 14 37.29808248682632 39.0 35.0 41.0 32.0 41.0 15 37.495627056395946 40.0 35.0 41.0 32.0 41.0 16 37.57428828131458 40.0 35.0 41.0 33.0 41.0 17 37.46313802834746 39.0 35.0 41.0 32.0 41.0 18 37.4263243402344 39.0 36.0 41.0 32.0 41.0 19 37.37211853493063 39.0 35.0 41.0 32.0 41.0 20 37.25850775279137 39.0 35.0 41.0 32.0 41.0 21 37.148222740851814 39.0 35.0 41.0 32.0 41.0 22 37.06358285494002 39.0 35.0 41.0 32.0 41.0 23 36.99300468079945 39.0 35.0 41.0 32.0 41.0 24 36.851317599852294 38.0 35.0 41.0 31.0 41.0 25 36.754935157137815 38.0 35.0 41.0 31.0 41.0 26 36.64412018506888 38.0 35.0 41.0 31.0 41.0 27 36.54881697602896 38.0 35.0 41.0 31.0 41.0 28 36.5751110328274 38.0 35.0 41.0 31.0 41.0 29 36.557794624226595 38.0 35.0 41.0 31.0 41.0 30 36.50172855071355 38.0 35.0 41.0 31.0 41.0 31 36.41407190925476 38.0 35.0 40.0 31.0 41.0 32 36.33011262811554 38.0 35.0 41.0 30.0 41.0 33 36.23179961635831 38.0 35.0 41.0 30.0 41.0 34 36.10709752579693 38.0 35.0 41.0 30.0 41.0 35 36.012305736007235 38.0 35.0 41.0 30.0 41.0 36 35.90677105181635 38.0 35.0 41.0 29.0 41.0 37 35.85558895488927 38.0 35.0 41.0 29.0 41.0 38 35.742944616076336 38.0 35.0 40.0 29.0 41.0 39 35.67328112530776 38.0 35.0 40.0 29.0 41.0 40 35.51453643553143 38.0 35.0 40.0 28.0 41.0 41 35.43185802012767 38.0 35.0 40.0 28.0 41.0 42 35.36142122019071 38.0 34.0 40.0 27.0 41.0 43 35.26856695227346 37.0 34.0 40.0 27.0 41.0 44 35.16277346831093 37.0 34.0 40.0 27.0 41.0 45 35.04752490851235 37.0 34.0 40.0 27.0 41.0 46 34.97960039770186 37.0 34.0 40.0 27.0 41.0 47 34.89548892684619 37.0 34.0 40.0 26.0 41.0 48 34.83691519942647 36.0 34.0 40.0 26.0 41.0 49 34.77632669647113 36.0 34.0 40.0 26.0 41.0 50 34.65576771986586 36.0 34.0 40.0 26.0 41.0 51 34.28462489870113 36.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 2.0 12 2.0 13 8.0 14 24.0 15 45.0 16 108.0 17 249.0 18 564.0 19 1060.0 20 1855.0 21 2917.0 22 4238.0 23 6374.0 24 9049.0 25 12812.0 26 16643.0 27 20177.0 28 22678.0 29 25958.0 30 30431.0 31 36466.0 32 45838.0 33 59216.0 34 98525.0 35 151925.0 36 100683.0 37 130530.0 38 189641.0 39 326178.0 40 240.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.49368335423045 23.752488533625044 28.127517986584127 13.626310125560378 2 30.73560165539149 25.752972141556523 29.40019483373853 14.111231369313455 3 29.90234364437976 25.622799719105682 30.649772835603432 13.82508380091113 4 25.772362811013593 28.67810484403644 29.70071158349151 15.848820761458457 5 23.345207221363417 31.981780496076674 29.461688749626287 15.211323532933624 6 21.467556937881103 41.37350832833116 26.210545588545447 10.948389145242295 7 87.77553484642357 3.839893328141887 6.5649390429970715 1.8196327824374612 8 85.32427611386262 5.835278194303779 5.983527973937704 2.856917717895888 9 82.51880933564168 5.290639868915984 8.836969276990692 3.353581518451651 10 44.03675111264588 28.462335362787066 14.079093845432416 13.421819679134636 11 35.32640058959996 24.464767308103834 24.216319527331187 15.992512574965023 12 31.459082211030744 22.59816429845562 27.219787444271137 18.722966046242497 13 23.931176256550145 30.507162573381326 28.750182511779254 16.811478658289282 14 19.620576358679486 32.54125152479418 29.562891048386287 18.275281068140046 15 18.469110509047564 24.280826336082793 38.99988952726166 18.25017362760799 16 21.659377783546052 21.52935986842156 37.05804144968044 19.753220898351948 17 21.124550673381556 22.56587226724823 28.87672401206084 27.43285304730937 18 23.73734681564263 23.207232178931843 31.558353168211355 21.49706783721417 19 27.16207895787899 25.917754205110022 26.245155229648105 20.67501160736289 20 28.870234704354093 24.85173090695028 25.28929565517673 20.988738733518897 21 25.033895044718285 27.425977471286743 27.785207005053163 19.75492047894181 22 24.979585719505852 23.44447817854403 27.15867979669926 24.417256305250852 23 22.465519758783163 28.047096923218355 26.33507849358447 23.15230482441401 24 22.1174920061772 25.194428156797127 32.59030760091067 20.097772236115006 25 22.221861705127402 25.497571531098075 30.195830310783762 22.08473645299076 26 20.18738648539867 29.71948422364317 27.311564796123722 22.781564494834434 27 20.874635073008573 27.796331532550443 28.54221565051061 22.786817743930374 28 19.58635298589271 27.389513742267873 32.26066622014049 20.763467051698925 29 20.026930626983006 25.156960130156968 31.48055872939355 23.335550513466472 30 22.545322792843532 26.651973019930676 29.792952457323146 21.009751729902653 31 26.557646297193298 25.811144149927728 26.170528191020498 21.460681361858473 32 25.984655877420064 25.717589963822107 26.818454664074032 21.47929949468379 33 24.897465075550222 25.965265207963 26.73934691298225 22.397922803504535 34 20.857098491467717 26.73432542487583 29.168511097874983 23.240064985781466 35 20.52946570594011 26.48325101955522 30.217075068157044 22.770208206347625 36 25.87526469036345 25.928183449638727 26.423147669604624 21.773404190393197 37 22.859745201968114 27.985062231688374 27.89784284596315 21.25734972038037 38 22.40549366249574 29.048767919952844 26.113205972944222 22.432532444607194 39 22.823744994928298 27.297813644078467 26.184124835739397 23.694316525253836 40 23.97490182990752 25.059156992576696 27.092241646368265 23.87369953114752 41 20.423241919073696 24.55175493283953 28.171707081920555 26.853296066166216 42 22.92456102537242 26.055265725562542 26.196021899868438 24.824151349196597 43 22.337355931574884 25.45060130388733 27.83704421304397 24.374998551493814 44 22.054839285341814 27.144696883664484 27.740477134074503 23.059986696919204 45 20.641483517544692 28.690851698460413 26.4905901175569 24.177074666437996 46 23.395576609753892 26.97589762962585 26.959056331053578 22.66946942956668 47 22.42349376601565 26.304254281977418 28.26587929733158 23.006372654675353 48 22.9692136426879 24.766442862804446 29.30262345714778 22.96172003735987 49 23.005831879033124 23.998155182523366 29.736093761225924 23.259919177217586 50 21.054713361870835 26.88064386293037 28.98372033555901 23.08092243963978 51 20.77575038414384 28.367776879060163 26.975202346657273 23.881270390138727 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1111.0 1 1582.5 2 2054.0 3 6559.0 4 11064.0 5 7815.5 6 4567.0 7 4624.0 8 4681.0 9 5179.0 10 5677.0 11 5742.5 12 5808.0 13 5756.0 14 5704.0 15 5689.5 16 5675.0 17 5625.5 18 5576.0 19 5397.5 20 5219.0 21 5625.0 22 6031.0 23 6549.5 24 7068.0 25 7615.5 26 8513.5 27 8864.0 28 11249.0 29 13634.0 30 16002.0 31 18370.0 32 21002.0 33 23634.0 34 27146.0 35 30658.0 36 34654.0 37 38650.0 38 42772.0 39 46894.0 40 57165.5 41 67437.0 42 77526.0 43 87615.0 44 90999.5 45 94384.0 46 99852.5 47 105321.0 48 109103.5 49 112886.0 50 108319.0 51 103752.0 52 96112.5 53 88473.0 54 81990.5 55 75508.0 56 69909.5 57 64311.0 58 60123.5 59 55936.0 60 51833.5 61 47731.0 62 42823.0 63 37915.0 64 33669.0 65 29423.0 66 25054.5 67 20686.0 68 17560.0 69 14434.0 70 12554.5 71 10675.0 72 9072.5 73 7470.0 74 6070.0 75 4169.0 76 3668.0 77 2669.0 78 1670.0 79 1242.0 80 814.0 81 553.5 82 293.0 83 221.0 84 149.0 85 102.0 86 55.0 87 43.0 88 31.0 89 20.5 90 10.0 91 9.5 92 9.0 93 7.5 94 6.0 95 4.5 96 3.0 97 1.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1294437.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.316307436479875 #Duplication Level Percentage of deduplicated Percentage of total 1 78.1392541504513 19.781973809300613 2 6.537143857370456 3.3099268729937283 3 2.388784079645533 1.8142557647902482 4 1.4608574057334538 1.4793406081762615 5 0.9681020094841394 1.2254384050987213 6 0.7233802148841366 1.0987989548084207 7 0.6091360107529119 1.0794752163196137 8 0.504171348207513 1.0211005481508755 9 0.45177054690594537 1.0293445850595808 >10 6.828484910848644 42.755317841781824 >50 1.3108264693816423 21.479794900552214 >100 0.07462537149691159 2.7985446504101237 >500 0.002833874866949014 0.5155948044194262 >1k 3.148749852165571E-4 0.10386827924528637 >5k 3.148749852165571E-4 0.5072247588931368 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6363 0.491565058786175 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 1303 0.10066152311777243 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.8626831587786813E-4 0.0 0.0 0.05647242778134432 0.0 2 3.8626831587786813E-4 0.0 0.0 0.19297965061258293 0.0 3 3.8626831587786813E-4 0.0 0.0 0.28954672958204997 0.0 4 3.8626831587786813E-4 0.0 0.0 0.5541405259583896 0.0 5 3.8626831587786813E-4 0.0 0.0 0.9250353628643186 0.0 6 3.8626831587786813E-4 0.0 0.0 1.6204728387708325 0.0 7 3.8626831587786813E-4 0.0 0.0 1.9334274282950812 0.0 8 3.8626831587786813E-4 0.0 0.0 2.8053895245577807 0.0 9 3.8626831587786813E-4 0.0 0.0 3.1982244018055725 0.0 10 3.8626831587786813E-4 0.0 0.0 3.795395218152757 0.0 11 3.8626831587786813E-4 0.0 0.0 4.282943086453802 0.0 12 3.8626831587786813E-4 0.0 0.0 4.710542112130602 0.0 13 3.8626831587786813E-4 0.0 0.0 4.912792202324254 0.0 14 3.8626831587786813E-4 0.0 0.0 4.996921441522454 0.0 15 3.8626831587786813E-4 0.0 0.0 5.086767451795645 0.0 16 3.8626831587786813E-4 0.0 0.0 5.2748801216281676 0.0 17 3.8626831587786813E-4 0.0 0.0 5.476357675190063 0.0 18 3.8626831587786813E-4 0.0 0.0 5.748831345210312 0.0 19 3.8626831587786813E-4 0.0 0.0 5.892136890401001 0.0 20 3.8626831587786813E-4 0.0 0.0 6.0383008211291855 0.0 21 3.8626831587786813E-4 0.0 0.0 6.227726803235693 0.0 22 3.8626831587786813E-4 0.0 0.0 6.430672176397924 0.0 23 3.8626831587786813E-4 0.0 0.0 6.650227087142905 0.0 24 3.8626831587786813E-4 0.0 0.0 6.82605642453051 0.0 25 3.8626831587786813E-4 0.0 0.0 6.972761130900924 0.0 26 3.8626831587786813E-4 0.0 0.0 7.113903573522697 0.0 27 3.8626831587786813E-4 0.0 0.0 7.264161948399188 0.0 28 3.8626831587786813E-4 0.0 0.0 7.415424620896961 0.0 29 3.8626831587786813E-4 0.0 0.0 7.586618738494033 0.0 30 3.8626831587786813E-4 0.0 0.0 7.811349644671776 0.0 31 3.8626831587786813E-4 0.0 0.0 7.987951518691138 0.0 32 3.8626831587786813E-4 0.0 0.0 8.16663924161624 0.0 33 3.8626831587786813E-4 0.0 0.0 8.34779908176296 0.0 34 3.8626831587786813E-4 0.0 0.0 8.529267936562382 0.0 35 3.8626831587786813E-4 0.0 0.0 8.734067397640828 0.0 36 3.8626831587786813E-4 0.0 0.0 8.907656378796341 0.0 37 3.8626831587786813E-4 0.0 0.0 9.101176805051153 0.0 38 3.8626831587786813E-4 0.0 0.0 9.320422701143432 0.0 39 3.8626831587786813E-4 0.0 0.0 9.617308528727161 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGCAAC 20 7.033616E-4 45.000004 34 TCTAACG 20 7.033616E-4 45.000004 1 CCGGTAT 25 3.8910795E-5 45.0 42 CGTTAGG 195 0.0 41.538464 2 TCACGAC 110 0.0 40.909092 25 CGTTTTT 3520 0.0 40.205967 1 GTATGCG 90 0.0 40.0 1 ATAGTCG 45 1.9286745E-8 40.0 10 AGGGCGA 1420 0.0 39.454227 6 ATACGAC 35 6.2489E-6 38.571426 37 TACGGGA 370 0.0 38.31081 4 GGGCGAT 2720 0.0 37.72059 7 TTAGGGA 1345 0.0 37.63941 4 CTCACGA 120 0.0 37.499996 24 CGGTCTA 120 0.0 37.499996 31 TAGGGCG 565 0.0 37.433628 5 GACACGA 750 0.0 37.2 25 CACGACC 745 0.0 37.14765 27 ATGACGG 85 0.0 37.058823 2 CGTATGG 195 0.0 36.92308 2 >>END_MODULE