##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547125_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 721534 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.529961166071175 31.0 31.0 33.0 30.0 34.0 2 31.908102736669374 31.0 31.0 34.0 30.0 34.0 3 32.02144736076193 33.0 31.0 34.0 30.0 34.0 4 35.75784924896124 37.0 35.0 37.0 35.0 37.0 5 35.69161397799688 37.0 35.0 37.0 33.0 37.0 6 35.7351060379691 37.0 35.0 37.0 33.0 37.0 7 36.05706730382768 37.0 35.0 37.0 35.0 37.0 8 34.72501365147034 37.0 35.0 37.0 33.0 37.0 9 37.06110176374225 39.0 37.0 39.0 34.0 39.0 10 37.00238658192129 39.0 37.0 39.0 32.0 39.0 11 36.921449301072435 39.0 37.0 39.0 33.0 39.0 12 36.50947010120105 39.0 35.0 39.0 32.0 39.0 13 36.35216358480682 39.0 35.0 39.0 32.0 39.0 14 37.427428229300354 40.0 35.0 41.0 32.0 41.0 15 37.61389206884222 40.0 35.0 41.0 33.0 41.0 16 37.69079211790435 40.0 35.0 41.0 33.0 41.0 17 37.60426535686468 39.0 35.0 41.0 33.0 41.0 18 37.53989832772953 39.0 36.0 41.0 33.0 41.0 19 37.49012243359287 39.0 35.0 41.0 33.0 41.0 20 37.3671330803538 39.0 35.0 41.0 33.0 41.0 21 37.24275640510357 39.0 35.0 41.0 32.0 41.0 22 37.16635945083669 39.0 35.0 41.0 32.0 41.0 23 37.10992413385925 39.0 35.0 41.0 32.0 41.0 24 36.95644002916009 39.0 35.0 41.0 32.0 41.0 25 36.85929283997705 38.0 35.0 41.0 32.0 41.0 26 36.75081978118841 38.0 35.0 41.0 31.0 41.0 27 36.64258510340469 38.0 35.0 41.0 31.0 41.0 28 36.687686235160086 38.0 35.0 41.0 31.0 41.0 29 36.65731483201069 38.0 35.0 41.0 31.0 41.0 30 36.601580798687245 38.0 35.0 41.0 31.0 41.0 31 36.4808366618898 38.0 35.0 41.0 31.0 41.0 32 36.404978836756136 38.0 35.0 41.0 31.0 41.0 33 36.27236277153953 38.0 35.0 41.0 30.0 41.0 34 36.11644496309252 38.0 35.0 41.0 30.0 41.0 35 36.01565553390415 38.0 35.0 41.0 30.0 41.0 36 35.88013454667417 38.0 35.0 41.0 30.0 41.0 37 35.835451967613444 38.0 35.0 41.0 29.0 41.0 38 35.75241637954691 38.0 35.0 41.0 29.0 41.0 39 35.67202654344771 38.0 35.0 40.0 29.0 41.0 40 35.52357061482896 38.0 35.0 40.0 28.0 41.0 41 35.430879210127316 38.0 35.0 40.0 28.0 41.0 42 35.37498856602738 38.0 35.0 40.0 28.0 41.0 43 35.29395842746149 37.0 34.0 40.0 27.0 41.0 44 35.163185657224744 37.0 34.0 40.0 27.0 41.0 45 35.0364071547564 37.0 34.0 40.0 27.0 41.0 46 34.97575443430247 37.0 34.0 40.0 27.0 41.0 47 34.904632352737366 37.0 34.0 40.0 27.0 41.0 48 34.847846393932926 36.0 34.0 40.0 26.0 41.0 49 34.783112091737884 36.0 34.0 40.0 26.0 41.0 50 34.67849886491835 36.0 34.0 40.0 26.0 41.0 51 34.31917553434766 35.0 34.0 40.0 25.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 2.0 11 0.0 12 3.0 13 7.0 14 6.0 15 19.0 16 43.0 17 113.0 18 299.0 19 509.0 20 938.0 21 1589.0 22 2243.0 23 3410.0 24 4900.0 25 6897.0 26 9166.0 27 10817.0 28 12067.0 29 13574.0 30 15967.0 31 19689.0 32 24284.0 33 31963.0 34 55585.0 35 88454.0 36 55750.0 37 72886.0 38 105694.0 39 184522.0 40 137.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.03470938306442 24.194701843572165 28.20740256176424 13.563186211599177 2 32.244218567662784 26.168413408099966 27.802847821447084 13.784520202790166 3 29.90531284735023 25.84285702406262 30.429889651769702 13.82194047681745 4 26.55605972830109 28.187860863105552 29.59458597931629 15.661493429277067 5 23.47152039959309 31.862254585369502 29.36410481002974 15.302120205007663 6 21.458032469710368 40.432190305654345 27.365584989757934 10.744192234877358 7 87.09790529621611 4.1518487001305555 6.966546275019611 1.7836997286337166 8 84.81568436137452 6.233108904084908 6.372395479630898 2.578811254909678 9 82.4823223853623 5.37424431835506 8.77865769319256 3.364775603090083 10 45.44900171024512 26.15649435785424 15.503773903932455 12.89073002796819 11 38.03798573594592 24.333988419118157 21.87007126483298 15.757954580102949 12 33.09629206662471 22.635800946317154 26.89797015802443 17.369936829033698 13 23.524463157661316 31.76995124276888 28.027785246433297 16.67780035313651 14 19.749034695523704 33.15366982013322 29.422591312398303 17.674704171944775 15 18.48381365257909 23.64628693866124 40.016548076736505 17.853351332023163 16 21.358938040341826 21.435857492509015 37.927388037154174 19.27781642999498 17 21.640144469976466 22.19424171279524 28.183564461272788 27.982049355955507 18 24.049317149295806 22.947913750426174 31.99558163579263 21.007187464485387 19 28.309130269675443 25.138247123489677 25.76413585499782 20.788486751837056 20 30.11029279285522 23.89353793445631 25.363184548475886 20.63298472421258 21 25.224036566537407 27.038088295215474 28.046218196231916 19.691656942015207 22 25.414325589646502 23.888687158193516 26.668320550382933 24.028666701777045 23 22.98685855413605 27.823636862573352 26.27693220277908 22.91257238051152 24 22.442601457450376 24.352282775309273 33.15547153703083 20.049644230209527 25 21.852608470286917 25.481266302073085 30.58012512230886 22.08600010533114 26 21.106697674676454 29.72126053657901 27.029911272372477 22.142130516372063 27 20.553847774325256 29.141523476371177 27.813103748402707 22.491525000900857 28 19.54599506052383 27.23198075211979 32.42771650400397 20.794307683352415 29 20.552184651035155 25.365956420626055 31.793234968830298 22.28862395950849 30 22.067705749140025 27.08008215829053 30.30598696665715 20.546225125912294 31 27.032405957307624 26.3839264677756 25.671278137967164 20.91238943694961 32 28.390900498105427 25.972857827905543 26.093295672830386 19.542946001158644 33 27.20273750093551 26.69479192941705 25.079344840298585 21.02312572934886 34 22.697336508050903 27.01050816732129 27.80409516391466 22.488060160713147 35 22.475032361607354 27.138014286229062 28.903419658671663 21.48353369349192 36 28.367062397613974 26.600132495488776 25.16457990891628 19.86822519798097 37 23.361892856053906 29.433401613783968 26.39501395637628 20.80969157378585 38 23.7785052402243 29.893532390712014 25.107756529837815 21.220205839225873 39 22.85464025257299 28.170120881344467 26.57851189271746 22.39672697336508 40 25.60669351686823 25.099718100602324 26.426197518065674 22.86739086446377 41 20.29925131733224 25.229025936407712 27.90499131018081 26.566731436079245 42 23.774624619214062 26.251430978997526 25.994894211499386 23.979050190289023 43 22.86004540326582 25.28432478580358 27.707911200303798 24.147718610626804 44 22.833435430624196 27.725928369279895 27.61366754719805 21.826968652897854 45 21.05888288008604 29.681622764831594 25.286680877131225 23.972813477951142 46 22.914789878231655 28.612373082903925 26.81952617617465 21.65331086268977 47 22.43497880903741 26.570612057089477 28.253415639457046 22.740993494416063 48 23.661532235487172 25.000900858448805 29.015126106323475 22.322440799740555 49 23.0090335313374 24.718724273561605 29.869417103005542 22.40282509209545 50 21.122774533147435 29.07513713837463 27.78898846069624 22.013099867781698 51 20.91044912644449 29.29189754051784 26.822575235539837 22.975078097497832 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 619.0 1 936.5 2 1254.0 3 3759.5 4 6265.0 5 4475.5 6 2686.0 7 2800.5 8 2915.0 9 3163.5 10 3412.0 11 3481.5 12 3551.0 13 3529.0 14 3507.0 15 3602.0 16 3697.0 17 3507.0 18 3317.0 19 3068.0 20 2819.0 21 3066.0 22 3313.0 23 3391.0 24 3469.0 25 3664.0 26 4868.5 27 5878.0 28 6485.0 29 7092.0 30 8580.5 31 10069.0 32 11306.0 33 12543.0 34 15777.5 35 19012.0 36 20671.0 37 22330.0 38 23959.5 39 25589.0 40 31692.0 41 37795.0 42 44253.5 43 50712.0 44 52431.5 45 54151.0 46 56358.0 47 58565.0 48 57653.5 49 56742.0 50 55052.5 51 53363.0 52 50048.5 53 46734.0 54 43615.5 55 40497.0 56 37816.0 57 35135.0 58 33614.5 59 32094.0 60 30201.5 61 28309.0 62 25464.5 63 22620.0 64 19901.5 65 17183.0 66 15069.5 67 12956.0 68 11055.5 69 9155.0 70 8019.0 71 6883.0 72 5721.0 73 4559.0 74 3927.0 75 2564.5 76 1834.0 77 1298.0 78 762.0 79 690.5 80 619.0 81 435.5 82 252.0 83 153.0 84 54.0 85 42.5 86 31.0 87 28.0 88 25.0 89 16.5 90 8.0 91 5.0 92 2.0 93 2.5 94 3.0 95 1.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 721534.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.14665097762608 #Duplication Level Percentage of deduplicated Percentage of total 1 75.5064023285867 20.497459505903564 2 6.802727537422395 3.693425403085831 3 2.7535401152699976 2.242481773863807 4 1.631637090730584 1.7717393049684949 5 1.1448154119766596 1.5538952211368795 6 0.9176152705653042 1.4946108889065743 7 0.7121979204676746 1.353365186174894 8 0.6571752632167263 1.4272086001339213 9 0.5898238960041015 1.4410569098778268 >10 8.807255247145482 55.3827655550458 >50 0.4514971493705347 7.397314275095969 >100 0.023763007861591235 1.047984408761498 >500 0.0010331742548517929 0.2154026564776744 >1k 5.165871274258964E-4 0.48129031056730376 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3432 0.4756532609689911 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 938 0.13000080384292356 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.3859360750844728E-4 0.0 0.0 0.029936219221824614 0.0 2 1.3859360750844728E-4 0.0 0.0 0.1245956531500941 0.0 3 1.3859360750844728E-4 0.0 0.0 0.20331682221489217 0.0 4 1.3859360750844728E-4 0.0 0.0 0.40108990012944645 0.0 5 1.3859360750844728E-4 0.0 0.0 0.6651107224330385 0.0 6 1.3859360750844728E-4 0.0 0.0 1.1561478738354671 0.0 7 1.3859360750844728E-4 0.0 0.0 1.3651470339582057 0.0 8 1.3859360750844728E-4 0.0 0.0 1.8679646419988525 0.0 9 1.3859360750844728E-4 0.0 0.0 2.149586852456017 0.0 10 1.3859360750844728E-4 0.0 0.0 2.599461702428437 0.0 11 1.3859360750844728E-4 0.0 0.0 2.978653812571549 0.0 12 1.3859360750844728E-4 0.0 0.0 3.3025470733187903 0.0 13 1.3859360750844728E-4 0.0 0.0 3.459850817840878 0.0 14 1.3859360750844728E-4 0.0 0.0 3.529009027987593 0.0 15 1.3859360750844728E-4 0.0 0.0 3.6017706719295277 0.0 16 1.3859360750844728E-4 0.0 0.0 3.742443183550602 0.0 17 1.3859360750844728E-4 0.0 0.0 3.8901839691546067 0.0 18 1.3859360750844728E-4 0.0 0.0 4.104726873577683 0.0 19 1.3859360750844728E-4 0.0 0.0 4.207979111171476 0.0 20 1.3859360750844728E-4 0.0 0.0 4.326753832806216 0.0 21 1.3859360750844728E-4 0.0 0.0 4.464100097847087 0.0 22 1.3859360750844728E-4 0.0 0.0 4.600476207635399 0.0 23 1.3859360750844728E-4 0.0 0.0 4.766927130253044 0.0 24 1.3859360750844728E-4 0.0 0.0 4.891245596188122 0.0 25 1.3859360750844728E-4 0.0 0.0 4.997408299539592 0.0 26 1.3859360750844728E-4 0.0 0.0 5.102462254030995 0.0 27 1.3859360750844728E-4 0.0 0.0 5.212782765607719 0.0 28 1.3859360750844728E-4 0.0 0.0 5.320885779464308 0.0 29 1.3859360750844728E-4 0.0 0.0 5.439106126669014 0.0 30 1.3859360750844728E-4 0.0 0.0 5.611793761624539 0.0 31 1.3859360750844728E-4 0.0 0.0 5.750387369132986 0.0 32 1.3859360750844728E-4 0.0 0.0 5.883575825948604 0.0 33 1.3859360750844728E-4 0.0 0.0 6.011913506501426 0.0 34 1.3859360750844728E-4 0.0 0.0 6.1421914975593666 0.0 35 1.3859360750844728E-4 0.0 0.0 6.304484611951758 0.0 36 1.3859360750844728E-4 0.0 0.0 6.438643224019935 0.0 37 1.3859360750844728E-4 0.0 0.0 6.574049178555688 0.0 38 1.3859360750844728E-4 0.0 0.0 6.733016046367878 0.0 39 1.3859360750844728E-4 0.0 0.0 6.9759706403301855 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGTACG 35 1.2110831E-7 45.000004 1 TTAGCCG 20 7.031539E-4 45.0 35 GCCGACC 20 7.031539E-4 45.0 14 CCGAATT 20 7.031539E-4 45.0 33 TTCGAAT 20 7.031539E-4 45.0 13 CCCGAAT 20 7.031539E-4 45.0 32 TACGTAG 30 2.1643737E-6 44.999996 1 GCGATTC 125 0.0 39.6 9 TAATACG 40 3.4558434E-7 39.375 1 ATTAGCG 40 3.4558434E-7 39.375 1 CGTTAGG 80 0.0 39.375 2 TTACGGG 155 0.0 39.19355 3 TTTACGG 75 0.0 39.0 2 TACGAAT 75 0.0 39.0 12 CGAATAT 75 0.0 39.0 14 CGGAATT 35 6.2450563E-6 38.57143 18 CTATGCG 35 6.2450563E-6 38.57143 1 GCGATGA 140 0.0 38.57143 9 ATTGGGA 385 0.0 38.57143 4 CGTTTTT 2425 0.0 38.412373 1 >>END_MODULE