##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547124_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1295719 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.45584575050609 31.0 31.0 33.0 30.0 34.0 2 31.82031443546016 31.0 31.0 34.0 30.0 34.0 3 31.93234412708311 33.0 31.0 34.0 30.0 34.0 4 35.67683116478187 37.0 35.0 37.0 33.0 37.0 5 35.6136708653651 37.0 35.0 37.0 33.0 37.0 6 35.6654984607002 37.0 35.0 37.0 33.0 37.0 7 36.03713922540304 37.0 35.0 37.0 35.0 37.0 8 34.723299573441466 37.0 35.0 37.0 33.0 37.0 9 37.02741643828639 39.0 37.0 39.0 34.0 39.0 10 36.900920647146485 39.0 37.0 39.0 32.0 39.0 11 36.823689395617414 39.0 37.0 39.0 32.0 39.0 12 36.5703474287249 39.0 35.0 39.0 32.0 39.0 13 36.51345700726778 39.0 35.0 39.0 32.0 39.0 14 37.610092929099594 40.0 36.0 41.0 33.0 41.0 15 37.75558512300893 40.0 36.0 41.0 33.0 41.0 16 37.782715233781396 40.0 36.0 41.0 33.0 41.0 17 37.67083063534609 40.0 36.0 41.0 33.0 41.0 18 37.60908190741974 39.0 36.0 41.0 33.0 41.0 19 37.560747353399925 39.0 36.0 41.0 32.0 41.0 20 37.458584770308995 39.0 35.0 41.0 32.0 41.0 21 37.360509493184864 39.0 35.0 41.0 32.0 41.0 22 37.28434020030578 39.0 35.0 41.0 32.0 41.0 23 37.203476988451975 39.0 35.0 41.0 32.0 41.0 24 37.063817849394816 39.0 35.0 41.0 32.0 41.0 25 36.974786971557876 39.0 35.0 41.0 31.0 41.0 26 36.86227337871869 39.0 35.0 41.0 31.0 41.0 27 36.75152714438856 39.0 35.0 41.0 31.0 41.0 28 36.771837103569524 39.0 35.0 41.0 31.0 41.0 29 36.744034007373514 39.0 35.0 41.0 31.0 41.0 30 36.670351364763505 38.0 35.0 41.0 31.0 41.0 31 36.57259714490565 38.0 35.0 41.0 31.0 41.0 32 36.51635732747609 39.0 35.0 41.0 30.0 41.0 33 36.37068531062676 39.0 35.0 41.0 30.0 41.0 34 36.24570296491755 39.0 35.0 41.0 30.0 41.0 35 36.11156662825813 39.0 35.0 41.0 30.0 41.0 36 36.01889993123509 38.0 35.0 41.0 30.0 41.0 37 35.99475889448252 38.0 35.0 41.0 29.0 41.0 38 35.89224361146206 38.0 35.0 41.0 29.0 41.0 39 35.81845600782268 38.0 35.0 41.0 29.0 41.0 40 35.70263305546959 38.0 35.0 40.0 28.0 41.0 41 35.62611029088869 38.0 35.0 40.0 28.0 41.0 42 35.56654027609381 38.0 35.0 40.0 28.0 41.0 43 35.48062735824666 38.0 35.0 40.0 28.0 41.0 44 35.35961886797986 38.0 34.0 40.0 27.0 41.0 45 35.2302026905525 38.0 34.0 40.0 27.0 41.0 46 35.154729536265194 37.0 34.0 40.0 27.0 41.0 47 35.07763951906239 37.0 34.0 40.0 26.0 41.0 48 34.99263806427165 37.0 34.0 40.0 26.0 41.0 49 34.923136112073685 37.0 34.0 40.0 26.0 41.0 50 34.81935280720588 37.0 34.0 40.0 26.0 41.0 51 34.46459533278435 36.0 34.0 40.0 25.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 4.0 12 1.0 13 6.0 14 15.0 15 50.0 16 97.0 17 191.0 18 470.0 19 905.0 20 1646.0 21 2540.0 22 3944.0 23 5625.0 24 8555.0 25 12380.0 26 16314.0 27 19725.0 28 22242.0 29 24811.0 30 29449.0 31 35788.0 32 44456.0 33 56906.0 34 91820.0 35 131519.0 36 104871.0 37 137256.0 38 198363.0 39 345533.0 40 235.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.7633244553796 23.82044254965776 27.569017665095597 13.847215329867046 2 32.421072778897276 25.255475917232058 28.380381857486075 13.943069446384596 3 29.753596265857023 25.683809529689693 30.889799408668082 13.672794795785197 4 25.54597100142855 28.245707595551195 30.759678603153922 15.448642799866331 5 23.188592588362138 32.56979329623167 29.153311790596568 15.088302324809625 6 21.86361394715984 40.852067462158075 26.57165635450279 10.712662236179295 7 88.16695595264096 3.457462613421583 6.660240376192678 1.7153410577447732 8 85.56600620967973 5.729328658451408 6.297738938766815 2.406926193102054 9 82.62100038665791 5.203906093836704 8.704819486323808 3.4702740331815773 10 41.25647613410006 30.866569063199663 15.19851140563656 12.678443397063715 11 32.228438419132544 25.985418134641847 24.938354689558462 16.84778875666715 12 28.80701757093938 23.169915699314434 28.927722754702216 19.09534397504397 13 23.573166712844372 28.073988264430795 30.30742005018063 18.045424972544204 14 20.772868191328524 29.68197579876501 30.83701018507871 18.70814582482776 15 20.204535088240583 24.458003625786144 36.70062721932765 18.636834066645623 16 23.257743384175118 22.825628087571456 34.592762782671244 19.323865745582182 17 23.055770579886534 23.204799806130804 29.106002150157558 24.633427463825104 18 23.987685601584914 23.5738613078916 31.305784664730545 21.13266842579294 19 26.991654826393685 25.733511664180277 27.002305283784523 20.272528225641516 20 28.12384475337631 25.459841215572204 26.374391361089867 20.04192266996162 21 25.854062493488172 26.579528431704713 28.41248758411353 19.153921490693584 22 25.516180591625194 23.622791670107485 27.853801634459323 23.007226103808 23 23.089265496608448 27.350760465810875 27.41798183093711 22.14199220664357 24 22.55620238647423 25.3666883020161 32.0783287117037 19.998780599805976 25 23.109948993570363 26.28849310691593 29.109397948166233 21.492159951347475 26 21.637407493445725 28.136887704818715 27.627363649062797 22.598341152672763 27 21.468235010831823 27.002536815466932 28.835650322330693 22.693577851370552 28 20.46076348344047 27.475247333719732 31.281165129167665 20.78282405367213 29 22.17872856691922 25.016303689303005 30.6586536123959 22.14631413138188 30 23.677819033293485 26.48259383400259 29.523145064632068 20.316442068071858 31 25.850126454887207 26.381954729381913 26.794621364663172 20.973297451067708 32 26.516628991316786 25.685893314831382 27.064818838035098 20.732658855816734 33 25.016149334848066 25.83075497079228 27.100551894353636 22.05254380000602 34 22.35145120199673 27.38657069935688 29.043179886997105 21.218798211649283 35 21.804959254282757 27.176339931729025 29.360609823580575 21.65809099040764 36 25.42071236124499 27.53475097609898 26.655239291852634 20.38929737080339 37 22.761339457089075 28.62341294678862 27.188842642579143 21.42640495354317 38 22.8298728350823 29.17839438952427 26.64057561863336 21.35115715676007 39 22.656532782185028 27.300132204590653 26.614566892976022 23.428768120248293 40 23.690244566916128 26.071933806635545 27.485743436655635 22.752078189792694 41 21.22026457897121 25.952309104057285 27.76296403772732 25.064462279244186 42 23.264612157419933 26.985712179878508 26.246740226854744 23.502935435846815 43 22.283380887368327 26.258625519885097 27.963624829148912 23.494368763597663 44 22.479488222369202 26.692978956085383 28.046358816996587 22.781174004548827 45 21.552126657091545 27.686249873622288 27.355468276686533 23.40615519259963 46 23.265692638604513 27.343351451973767 27.463593572371785 21.92736233704993 47 22.339488731738903 26.70741109762225 28.246710899508304 22.706389271130544 48 22.408176464187065 26.204369928973797 29.18040099743849 22.207052609400648 49 22.87710529829384 25.49040339765026 28.964073228840515 22.66841807521538 50 21.710648682314606 27.115832985392668 28.877866265756698 22.295652066536032 51 21.42717672581787 27.508279187076827 27.734254109108537 23.330289977996774 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1041.0 1 1553.5 2 2066.0 3 7574.0 4 13082.0 5 9020.5 6 4959.0 7 4968.0 8 4977.0 9 5265.0 10 5553.0 11 5796.5 12 6040.0 13 6051.5 14 6063.0 15 6075.0 16 6087.0 17 5887.0 18 5687.0 19 5743.0 20 5799.0 21 5776.5 22 5754.0 23 6241.0 24 6728.0 25 8103.0 26 10739.5 27 12001.0 28 14288.0 29 16575.0 30 18884.5 31 21194.0 32 24183.5 33 27173.0 34 31706.5 35 36240.0 36 38971.5 37 41703.0 38 46792.0 39 51881.0 40 58813.0 41 65745.0 42 73416.5 43 81088.0 44 85564.0 45 90040.0 46 93595.0 47 97150.0 48 99974.0 49 102798.0 50 100626.0 51 98454.0 52 91803.5 53 85153.0 54 79327.0 55 73501.0 56 68191.0 57 62881.0 58 59515.0 59 56149.0 60 52589.5 61 49030.0 62 45409.0 63 41788.0 64 37191.5 65 32595.0 66 28004.0 67 23413.0 68 19578.5 69 15744.0 70 13028.0 71 10312.0 72 9264.5 73 8217.0 74 6588.5 75 4254.5 76 3549.0 77 2684.0 78 1819.0 79 1273.0 80 727.0 81 496.5 82 266.0 83 192.0 84 118.0 85 106.5 86 95.0 87 64.0 88 33.0 89 20.5 90 8.0 91 5.5 92 3.0 93 2.0 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1295719.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.877693228789333 #Duplication Level Percentage of deduplicated Percentage of total 1 75.33432338644035 20.24812833579154 2 6.3776419335474825 3.4283260682590426 3 2.734344022045555 2.2047857941954323 4 1.70413148731615 1.8321249335041596 5 1.240459828126123 1.667034936150534 6 1.0194467307979629 1.64402258960879 7 0.8713312544068442 1.6393561909622352 8 0.7400988799406031 1.5913720523211297 9 0.6802179237787781 1.6454419815645005 >10 8.763634364159161 53.65836961824937 >50 0.5021370784956394 8.10427245085399 >100 0.030458811260766494 1.479235861259391 >500 0.0014785830704875593 0.25497762839872407 >1k 0.0 0.0 >5k 2.9571661409751184E-4 0.6025515588811493 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7581 0.5850805614488944 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.043142070155643315 0.0 2 0.0 0.0 0.0 0.15057277079366746 0.0 3 0.0 0.0 0.0 0.241873430890494 0.0 4 0.0 0.0 0.0 0.4242432194017376 0.0 5 0.0 0.0 0.0 0.7299422174097934 0.0 6 0.0 0.0 0.0 1.3365552253227744 0.0 7 0.0 0.0 0.0 1.6203358907293943 0.0 8 0.0 0.0 0.0 2.297180175639934 0.0 9 0.0 0.0 0.0 2.6478734972629097 0.0 10 0.0 0.0 0.0 3.134938979825101 0.0 11 0.0 0.0 0.0 3.5324017012948024 0.0 12 0.0 0.0 0.0 3.8623343487283894 0.0 13 0.0 0.0 0.0 4.042234465960598 0.0 14 0.0 0.0 0.0 4.1309882775509195 0.0 15 0.0 0.0 0.0 4.215728873312809 0.0 16 0.0 0.0 0.0 4.372861708441413 0.0 17 0.0 0.0 0.0 4.53369905048857 0.0 18 0.0 0.0 0.0 4.757513010151121 0.0 19 0.0 0.0 0.0 4.878218193913958 0.0 20 7.717722746984493E-5 0.0 0.0 5.001470226183301 0.0 21 7.717722746984493E-5 0.0 0.0 5.155052908848292 0.0 22 7.717722746984493E-5 0.0 0.0 5.328933202337852 0.0 23 7.717722746984493E-5 0.0 0.0 5.514698788857769 0.0 24 7.717722746984493E-5 0.0 0.0 5.676539434862034 0.0 25 7.717722746984493E-5 0.0 0.0 5.815458444307755 0.0 26 7.717722746984493E-5 0.0 0.0 5.9485119844657675 0.0 27 7.717722746984493E-5 0.0 0.0 6.087662525593898 0.0 28 7.717722746984493E-5 0.0 0.0 6.23128934591528 0.0 29 7.717722746984493E-5 0.0 0.0 6.381553407799068 0.0 30 7.717722746984493E-5 0.0 0.0 6.580516300216328 0.0 31 7.717722746984493E-5 0.0 0.0 6.745366858091916 0.0 32 7.717722746984493E-5 0.0 0.0 6.926115924826293 0.0 33 7.717722746984493E-5 0.0 0.0 7.096600420307181 0.0 34 7.717722746984493E-5 0.0 0.0 7.261759687092649 0.0 35 7.717722746984493E-5 0.0 0.0 7.454934287449671 0.0 36 7.717722746984493E-5 0.0 0.0 7.628197163119473 0.0 37 7.717722746984493E-5 0.0 0.0 7.804084064523249 0.0 38 7.717722746984493E-5 0.0 0.0 7.9977989054725604 0.0 39 7.717722746984493E-5 0.0 0.0 8.27123782239822 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGCCGT 30 2.165716E-6 45.000004 44 ATACCGG 20 7.0336193E-4 45.0 2 TATACGG 180 0.0 41.250004 2 CGTTTTT 4715 0.0 41.086956 1 TAACGCC 50 1.0822987E-9 40.499996 12 CGTAAGG 255 0.0 38.82353 2 CGTATGG 145 0.0 38.793102 2 GCGCGAC 265 0.0 38.207546 9 TCGATAG 65 9.094947E-12 38.076927 1 TCGCAAG 95 0.0 37.894737 1 CACGACC 735 0.0 37.65306 27 ACGGGAT 425 0.0 37.588234 5 AACACGT 635 0.0 37.559055 41 GGGCGAT 3010 0.0 37.524918 7 GTCGTTG 30 1.14000206E-4 37.500004 1 CGTCGAA 30 1.14000206E-4 37.500004 31 GACACGA 730 0.0 37.29452 25 GGACCGA 985 0.0 37.2335 8 AGGGCGA 1510 0.0 37.10265 6 TAAGGGA 1475 0.0 37.067795 4 >>END_MODULE