##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547123_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 880229 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.41967374399162 31.0 31.0 33.0 30.0 34.0 2 31.777782826968892 31.0 31.0 34.0 30.0 34.0 3 31.894354764498782 31.0 31.0 34.0 30.0 34.0 4 35.64055944532616 37.0 35.0 37.0 33.0 37.0 5 35.57277594807715 37.0 35.0 37.0 33.0 37.0 6 35.62142124378997 37.0 35.0 37.0 33.0 37.0 7 35.996408889050464 37.0 35.0 37.0 35.0 37.0 8 34.69051462744354 37.0 35.0 37.0 33.0 37.0 9 37.00789226439938 39.0 37.0 39.0 34.0 39.0 10 36.83332178330866 39.0 37.0 39.0 32.0 39.0 11 36.741950106165554 39.0 35.0 39.0 32.0 39.0 12 36.29825193216765 38.0 35.0 39.0 32.0 39.0 13 36.13640882088638 38.0 35.0 39.0 32.0 39.0 14 37.16591591506301 39.0 35.0 41.0 32.0 41.0 15 37.386338100653354 39.0 35.0 41.0 32.0 41.0 16 37.45485549783068 39.0 35.0 41.0 33.0 41.0 17 37.386146105161274 39.0 35.0 41.0 32.0 41.0 18 37.324621206526935 39.0 35.0 41.0 32.0 41.0 19 37.27444449114946 39.0 35.0 41.0 32.0 41.0 20 37.1259376821259 39.0 35.0 41.0 32.0 41.0 21 37.02468562158256 39.0 35.0 41.0 32.0 41.0 22 36.94724668239742 39.0 35.0 41.0 32.0 41.0 23 36.88346782485012 38.0 35.0 41.0 32.0 41.0 24 36.74069929529702 38.0 35.0 41.0 31.0 41.0 25 36.63452578817558 38.0 35.0 41.0 31.0 41.0 26 36.51066938262657 38.0 35.0 40.0 31.0 41.0 27 36.40325756138459 38.0 35.0 40.0 31.0 41.0 28 36.43990938721628 38.0 35.0 40.0 31.0 41.0 29 36.419405631943505 38.0 35.0 40.0 31.0 41.0 30 36.356927572256765 38.0 35.0 40.0 31.0 41.0 31 36.25897124498284 38.0 35.0 40.0 30.0 41.0 32 36.180098587981085 38.0 35.0 40.0 30.0 41.0 33 36.05216142617432 38.0 35.0 41.0 30.0 41.0 34 35.91306694053479 38.0 35.0 41.0 30.0 41.0 35 35.8193913174867 38.0 35.0 41.0 30.0 41.0 36 35.69751735059854 38.0 35.0 40.0 29.0 41.0 37 35.64257369389102 38.0 35.0 40.0 29.0 41.0 38 35.551106587035875 38.0 35.0 40.0 29.0 41.0 39 35.47653849168796 38.0 35.0 40.0 28.0 41.0 40 35.33756102105247 38.0 34.0 40.0 27.0 41.0 41 35.246693758101586 37.0 34.0 40.0 27.0 41.0 42 35.17001712054477 37.0 34.0 40.0 27.0 41.0 43 35.08376229367585 37.0 34.0 40.0 27.0 41.0 44 34.972608264440275 37.0 34.0 40.0 27.0 41.0 45 34.84826902999106 37.0 34.0 40.0 26.0 41.0 46 34.81233065486368 36.0 34.0 40.0 26.0 41.0 47 34.72611899857878 36.0 34.0 40.0 26.0 41.0 48 34.635107454991825 36.0 34.0 40.0 26.0 41.0 49 34.57934014898396 36.0 34.0 40.0 26.0 41.0 50 34.460898243525264 36.0 34.0 40.0 26.0 41.0 51 34.08455413307219 35.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 3.0 11 0.0 12 2.0 13 7.0 14 10.0 15 33.0 16 82.0 17 184.0 18 415.0 19 759.0 20 1276.0 21 2048.0 22 3069.0 23 4469.0 24 6631.0 25 9136.0 26 11904.0 27 14332.0 28 15518.0 29 17761.0 30 21232.0 31 25779.0 32 32273.0 33 41502.0 34 70032.0 35 110538.0 36 68760.0 37 87562.0 38 125966.0 39 208774.0 40 172.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.29709768707916 24.395356208441214 28.728319562295724 12.579226542183907 2 31.39376230503653 26.111046102775525 28.883847271562285 13.611344320625655 3 29.748849447132507 25.923708489495347 30.69803426153876 13.629407801833388 4 25.27058299601581 29.266929401326248 30.505129915056195 14.95735768760175 5 22.71738377172304 32.345900896244046 30.333810860582872 14.602904471450042 6 21.250038342295017 42.114949632425194 26.22783389322551 10.407178132054272 7 87.75693597915996 3.9381797236855407 6.581128320016723 1.7237559771377677 8 85.48809457538891 5.94493023974443 5.988782464563199 2.5781927203034667 9 83.26821770243879 4.5856248771626476 8.744315399742566 3.4018420206559883 10 45.764795297587334 23.43208415082893 16.45230956944159 14.350810982142148 11 39.140723607152225 23.992279281868694 20.98033579897958 15.886661311999491 12 33.60455063398275 22.374404842376244 25.929161615897684 18.091882907743326 13 23.388231926010164 31.48919201707737 28.13052058043986 16.9920554764726 14 20.009565692564095 33.83335472928067 29.008701144815724 17.148378433339506 15 18.631628814774338 24.090435557110705 40.07400346955167 17.203932158563283 16 20.78163750569454 21.56257064922878 38.61177034612584 19.04402149895084 17 21.57495379043408 21.64845739006554 28.327855592124322 28.448733227376056 18 23.41095328601989 23.65191330892302 31.851370495632388 21.08576290942471 19 28.460548334581116 26.03277101754203 25.644349368175785 19.862331279701078 20 29.338956112557074 24.90306499785851 24.798773955413875 20.95920493417054 21 25.1971930031844 27.15520620202243 27.912395524346508 19.735205270446667 22 25.224004207995876 23.98262270386456 26.48049541653365 24.31287767160591 23 22.94834639622189 28.299567498912214 25.13913992835955 23.61294617650634 24 22.45404320921033 25.51142941211889 32.40713496147025 19.62739241720052 25 22.100271633858917 25.42315692848111 30.623280987106767 21.85329045055321 26 20.092044229399395 29.97515419282937 27.149753075620094 22.783048502151146 27 21.090307181426653 28.9530338127919 27.805605132300798 22.15105387348065 28 19.237380272633597 27.996691769982583 32.6140129443588 20.15191501302502 29 20.71904015886775 25.655710048180648 31.210514536558097 22.414735256393506 30 21.497587559600966 28.360460743738276 29.018016902419713 21.123934794241045 31 26.86244147829713 26.29611158005474 25.2997799436283 21.541666998019835 32 28.37341191894382 26.10207116557169 25.7544343574229 19.770082558061596 33 26.212610582018996 26.753833377450643 24.921355692666342 22.11220034786402 34 21.852267989352768 27.625424747423683 27.957724637565907 22.564582625657643 35 21.513492511607772 27.070001101985962 28.2801407361039 23.136365650302366 36 27.496821849768637 25.96642464631363 26.312470959261734 20.224282544655996 37 22.68421058610884 29.395645905781336 26.873234124301742 21.046909383808078 38 22.863595723385618 29.673528138700274 25.699448666199366 21.763427471714746 39 22.532659114843977 28.186755946463933 26.176938046803727 23.10364689188836 40 24.027724603483865 25.045868745519634 27.406050016529786 23.52035663446671 41 21.049635947009243 24.37343009603183 27.716651007862726 26.860282949096202 42 23.095126381884715 26.789165092265765 25.221164037994658 24.894544487854866 43 22.66137561929907 25.779200639833498 27.04148579517376 24.517937945693678 44 22.264660673529274 27.421273327736305 27.57509693500214 22.738969063732277 45 19.966849535745812 30.374595701800327 25.918823397093256 23.739731365360605 46 22.868026388587516 28.226177506080802 26.608871100588598 22.296925004743084 47 22.906652700604045 26.45129846892116 27.551580327392077 23.09046850308272 48 23.122392013896384 25.354311207651648 28.813638269132234 22.709658509319734 49 22.87825100059189 24.276977922790547 29.421889076592567 23.422882000024995 50 21.748658587708427 28.20425139367142 27.186107251635654 22.8609827669845 51 20.554083085197146 29.23012079811049 26.268164307242774 23.94763180944959 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 848.0 1 1197.0 2 1546.0 3 4454.5 4 7363.0 5 5289.5 6 3216.0 7 3390.0 8 3564.0 9 3799.0 10 4034.0 11 4142.5 12 4251.0 13 4295.5 14 4340.0 15 4316.0 16 4292.0 17 4142.5 18 3993.0 19 3906.0 20 3819.0 21 3973.5 22 4128.0 23 4143.0 24 4158.0 25 4426.5 26 5067.0 27 5439.0 28 6889.0 29 8339.0 30 9670.5 31 11002.0 32 13186.0 33 15370.0 34 17925.5 35 20481.0 36 22972.0 37 25463.0 38 28621.5 39 31780.0 40 39924.0 41 48068.0 42 54520.0 43 60972.0 44 63652.5 45 66333.0 46 70443.5 47 74554.0 48 75612.5 49 76671.0 50 72672.5 51 68674.0 52 62647.5 53 56621.0 54 52049.0 55 47477.0 56 44830.5 57 42184.0 58 40474.5 59 38765.0 60 35473.0 61 32181.0 62 29887.5 63 27594.0 64 24696.0 65 21798.0 66 18683.0 67 15568.0 68 13309.5 69 11051.0 70 9227.0 71 7403.0 72 6340.0 73 5277.0 74 4237.5 75 2472.5 76 1747.0 77 1346.5 78 946.0 79 745.0 80 544.0 81 401.5 82 259.0 83 204.0 84 149.0 85 94.5 86 40.0 87 26.5 88 13.0 89 13.5 90 14.0 91 9.5 92 5.0 93 3.5 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 880229.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.971884023298873 #Duplication Level Percentage of deduplicated Percentage of total 1 76.99066230241667 22.30564539102584 2 7.09365480145086 4.11033088417903 3 2.7860329174313296 2.4214986770674045 4 1.7080274325778169 1.9793909074102976 5 1.1859399080940172 1.7179456737950798 6 0.8521521966196113 1.4813072766397655 7 0.7173199396984477 1.4547477070380215 8 0.5882424149238541 1.3633992818207326 9 0.508026211503864 1.3246628832437264 >10 6.830711918569435 46.79172647217808 >50 0.7056653581432227 12.641937063222858 >100 0.03113824204765762 1.5624484225135997 >500 0.0020219637693284173 0.3713978328860312 >1k 4.043927538656834E-4 0.47356152697960185 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4042 0.45919868579653705 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 882 0.10020119764288611 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.1360680004862371E-4 0.0 0.0 0.042829763618331136 0.0 2 1.1360680004862371E-4 0.0 0.0 0.17313676327410255 0.0 3 1.1360680004862371E-4 0.0 0.0 0.2884476653234556 0.0 4 1.1360680004862371E-4 0.0 0.0 0.5306573630271213 0.0 5 1.1360680004862371E-4 0.0 0.0 0.8770444963753751 0.0 6 1.1360680004862371E-4 0.0 0.0 1.6050368710869558 0.0 7 1.1360680004862371E-4 0.0 0.0 1.912002444818337 0.0 8 1.1360680004862371E-4 0.0 0.0 2.707022831558606 0.0 9 1.1360680004862371E-4 0.0 0.0 3.1008976073271843 0.0 10 1.1360680004862371E-4 0.0 0.0 3.7155103955902384 0.0 11 1.1360680004862371E-4 0.0 0.0 4.219356553805885 0.0 12 1.1360680004862371E-4 0.0 0.0 4.6514032143908 0.0 13 1.1360680004862371E-4 0.0 0.0 4.86691531408304 0.0 14 1.1360680004862371E-4 0.0 0.0 4.963253880524273 0.0 15 1.1360680004862371E-4 0.0 0.0 5.060955728566089 0.0 16 1.1360680004862371E-4 0.0 0.0 5.264652721053271 0.0 17 1.1360680004862371E-4 0.0 0.0 5.48516351994765 0.0 18 1.1360680004862371E-4 0.0 0.0 5.805648302884817 0.0 19 1.1360680004862371E-4 0.0 0.0 5.960948798551286 0.0 20 1.1360680004862371E-4 0.0 0.0 6.128632435423055 0.0 21 1.1360680004862371E-4 0.0 0.0 6.359481453121858 0.0 22 1.1360680004862371E-4 0.0 0.0 6.593965888422217 0.0 23 1.1360680004862371E-4 0.0 0.0 6.887980286948055 0.0 24 1.1360680004862371E-4 0.0 0.0 7.101220250639322 0.0 25 1.1360680004862371E-4 0.0 0.0 7.272993732312841 0.0 26 1.1360680004862371E-4 0.0 0.0 7.443517539185826 0.0 27 1.1360680004862371E-4 0.0 0.0 7.616199875259734 0.0 28 1.1360680004862371E-4 0.0 0.0 7.815579809345068 0.0 29 1.1360680004862371E-4 0.0 0.0 8.014505316230208 0.0 30 1.1360680004862371E-4 1.1360680004862371E-4 0.0 8.250580246731248 0.0 31 1.1360680004862371E-4 1.1360680004862371E-4 0.0 8.459048724820473 0.0 32 1.1360680004862371E-4 1.1360680004862371E-4 0.0 8.650021755702209 0.0 33 1.1360680004862371E-4 1.1360680004862371E-4 0.0 8.86303450579338 0.0 34 1.1360680004862371E-4 1.1360680004862371E-4 0.0 9.054234750275212 0.0 35 1.1360680004862371E-4 1.1360680004862371E-4 0.0 9.300647899580678 0.0 36 1.1360680004862371E-4 1.1360680004862371E-4 0.0 9.513206222471652 0.0 37 1.1360680004862371E-4 1.1360680004862371E-4 0.0 9.72633257936287 0.0 38 1.1360680004862371E-4 1.1360680004862371E-4 0.0 9.96081701466323 0.0 39 1.1360680004862371E-4 1.1360680004862371E-4 0.0 10.26289749599252 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATGCG 45 3.8380676E-10 45.000004 1 TCACGAA 20 7.032387E-4 45.0 35 ACTTAGC 20 7.032387E-4 45.0 30 TTATCGC 20 7.032387E-4 45.0 45 CGTTATT 25 3.8900584E-5 45.0 32 ACGTATC 20 7.032387E-4 45.0 12 TACACCG 20 7.032387E-4 45.0 29 TACGTAG 25 3.8900584E-5 45.0 1 TCAACGG 30 2.1649212E-6 44.999996 2 TACGGGA 170 0.0 42.35294 4 CGTTTTT 2905 0.0 41.979347 1 CGGGATA 120 0.0 41.249996 6 GGACGTA 50 1.0804797E-9 40.5 8 CGTAAGG 95 0.0 40.263157 2 GCGATAT 135 0.0 40.000004 9 TCGTTAG 40 3.4569894E-7 39.375 1 GCGTAAG 40 3.4569894E-7 39.375 1 GGGCGAT 1850 0.0 38.7973 7 TAATACG 35 6.2466224E-6 38.571426 1 AGGGCGA 940 0.0 38.29787 6 >>END_MODULE