##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547122_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 967176 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.421585109638784 31.0 31.0 33.0 30.0 34.0 2 31.781215621562158 31.0 31.0 34.0 30.0 34.0 3 31.895640503900015 31.0 31.0 34.0 30.0 34.0 4 35.64727412590883 37.0 35.0 37.0 33.0 37.0 5 35.58300454105561 37.0 35.0 37.0 33.0 37.0 6 35.62779163254671 37.0 35.0 37.0 33.0 37.0 7 36.00291363722838 37.0 35.0 37.0 35.0 37.0 8 34.68572317758092 37.0 35.0 37.0 33.0 37.0 9 36.983633795710396 39.0 37.0 39.0 33.0 39.0 10 36.857235911561084 39.0 37.0 39.0 32.0 39.0 11 36.7682210890262 39.0 37.0 39.0 32.0 39.0 12 36.471559467976874 39.0 35.0 39.0 32.0 39.0 13 36.38486893802162 39.0 35.0 39.0 32.0 39.0 14 37.42796037122509 40.0 36.0 41.0 32.0 41.0 15 37.58358871601446 40.0 36.0 41.0 32.0 41.0 16 37.64255006327701 40.0 35.0 41.0 33.0 41.0 17 37.52086797025567 39.0 35.0 41.0 32.0 41.0 18 37.46882470201908 39.0 36.0 41.0 32.0 41.0 19 37.434558963415135 39.0 36.0 41.0 32.0 41.0 20 37.32079890319859 39.0 35.0 41.0 32.0 41.0 21 37.21492262008156 39.0 35.0 41.0 32.0 41.0 22 37.14487849160856 39.0 35.0 41.0 32.0 41.0 23 37.07095502783361 39.0 35.0 41.0 32.0 41.0 24 36.92249704293738 39.0 35.0 41.0 31.0 41.0 25 36.82300119109655 38.0 35.0 41.0 31.0 41.0 26 36.71821467861072 38.0 35.0 41.0 31.0 41.0 27 36.61544641306236 38.0 35.0 41.0 31.0 41.0 28 36.633430730291074 38.0 35.0 41.0 31.0 41.0 29 36.59185608410465 38.0 35.0 41.0 31.0 41.0 30 36.51827278592521 38.0 35.0 41.0 31.0 41.0 31 36.43059277732284 38.0 35.0 41.0 30.0 41.0 32 36.37540013399836 38.0 35.0 41.0 30.0 41.0 33 36.269303622091535 38.0 35.0 41.0 30.0 41.0 34 36.13085105503031 38.0 35.0 41.0 30.0 41.0 35 36.031835984350316 38.0 35.0 41.0 30.0 41.0 36 35.92274828986658 38.0 35.0 41.0 29.0 41.0 37 35.90402160516803 38.0 35.0 41.0 29.0 41.0 38 35.78692709496514 38.0 35.0 41.0 29.0 41.0 39 35.739182940850476 38.0 35.0 40.0 29.0 41.0 40 35.598953034401184 38.0 35.0 40.0 28.0 41.0 41 35.50635561676469 38.0 35.0 40.0 28.0 41.0 42 35.45334975226846 38.0 34.0 40.0 27.0 41.0 43 35.364691638336765 38.0 34.0 40.0 27.0 41.0 44 35.25726961793924 38.0 34.0 40.0 27.0 41.0 45 35.12089216440441 37.0 34.0 40.0 27.0 41.0 46 35.04449552098067 37.0 34.0 40.0 26.0 41.0 47 34.97847030943696 37.0 34.0 40.0 26.0 41.0 48 34.91287935184496 37.0 34.0 40.0 26.0 41.0 49 34.82547643862131 37.0 34.0 40.0 26.0 41.0 50 34.718849516530604 36.0 34.0 40.0 26.0 41.0 51 34.3681005318577 36.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 0.0 11 2.0 12 3.0 13 7.0 14 13.0 15 24.0 16 73.0 17 167.0 18 404.0 19 724.0 20 1272.0 21 1974.0 22 3239.0 23 4528.0 24 6782.0 25 9432.0 26 12669.0 27 15168.0 28 16636.0 29 19240.0 30 22879.0 31 27953.0 32 34266.0 33 44110.0 34 71056.0 35 102993.0 36 77571.0 37 100316.0 38 145131.0 39 248380.0 40 162.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.102194429969316 22.93956839292952 27.626926226457233 14.331310950643935 2 32.13117364368016 25.102980222834315 28.714732375493192 14.05111375799234 3 29.868607161468024 25.582727445676902 30.579542916697683 13.96912247615739 4 25.687672150673713 28.754125412541253 29.969312720745762 15.588889716039272 5 22.92943580072293 32.12993291810384 29.662439928203348 15.278191352969884 6 21.82591379438696 40.7948501617079 26.62659123055163 10.752644813353514 7 88.19997601263886 3.455213942446876 6.694645028412616 1.65016501650165 8 85.81592181774569 5.648093004789201 6.047089671373152 2.4888955060919624 9 82.88884339561776 5.141773575853826 8.687250303977766 3.282132724550651 10 41.32246871303672 31.988386808605675 14.192142898500377 12.497001579857233 11 33.38937277186365 25.45958543222743 25.19469052168375 15.956351274225167 12 29.92278551163387 23.11533784957443 28.041845537937256 18.920031100854445 13 24.025927028793102 29.0450755601876 29.488428166124887 17.440569244894412 14 20.763749307261552 29.94418802782534 30.39074584150144 18.901316823411666 15 20.012489970801592 24.33217945854736 37.141533702242405 18.513796868408644 16 23.57326898103344 22.99064492915457 34.73928219889658 18.696803890915405 17 22.786545571850418 23.334739488986493 29.08291769026527 24.79579724889782 18 24.842014276615632 23.16496687262711 30.919088149416446 21.07393070134081 19 26.93749638121707 26.22345881204662 26.26822832659206 20.570816480144256 20 28.60647906895953 25.49815131889129 25.83190649892057 20.063463113228615 21 25.911933298593016 27.072942256631677 27.682138514603338 19.332985930171965 22 25.349264249733245 23.625689636632835 27.481554546432086 23.543491567201833 23 22.986715964829564 27.8467414410614 27.122571279684358 22.043971314424677 24 22.70910361712863 25.832009892718595 31.7806686683706 19.67821782178218 25 23.129192618509972 25.810297195133046 29.554806984457844 21.505703201899138 26 21.543648725774833 28.225059348040066 27.832162915539676 22.399129010645424 27 21.22984854876465 26.65078537928981 28.995136355740836 23.124229716204702 28 20.136355740837242 27.965127339801647 30.777025070928143 21.121491848432964 29 21.18373491484487 25.927855943489085 30.29531336592306 22.593095775742988 30 22.781686063343177 26.021427330702995 29.99236953770565 21.204517068248176 31 25.762529260444843 26.163180227797216 26.859847638899225 21.21444287285871 32 26.17227888202354 25.851964895737694 27.06084518226259 20.91491103997618 33 24.968154710207862 26.68976484114577 25.993717792831916 22.348362655814455 34 21.310909286417363 27.73021663068562 29.043111078025095 21.915763004871916 35 20.87582818432219 28.163643432012375 28.69022804536093 22.27030033830451 36 24.624370331770017 28.914385799482208 25.492361266201808 20.968882602545968 37 22.19430589675509 29.391341389778074 26.124717734931384 22.289634978535446 38 22.38175885257699 29.65964829565663 25.872126686352846 22.086466165413533 39 22.46654176695865 28.046084683656336 25.35288303266417 24.134490516720845 40 24.076693383624075 25.99785354475297 26.409154073302066 23.516298998320885 41 20.19270536076164 25.601545116917706 27.309300478920072 26.896449043400583 42 22.354669677494066 26.984230377925012 26.006435229989165 24.65466471459176 43 22.00044252545555 25.995165306004285 27.560237226730194 24.44415494180997 44 22.249518184901195 27.076871220956683 27.681518151815183 22.99209244232694 45 21.48399050431359 27.858424940238386 26.515442897673225 24.1421416577748 46 23.11761251313101 27.25563909774436 26.895725286814397 22.73102310231023 47 21.98493345575159 26.88693681398215 28.092818680364278 23.03531104990198 48 22.301628659106512 26.25975003515389 28.89225952670455 22.546361779035045 49 23.17489267723765 25.331066941280593 28.69818936780896 22.795851013672795 50 21.164813849806034 27.503991000603822 28.771288783013638 22.559906366576506 51 21.203689917863965 27.591875728926276 27.36740779341092 23.837026559798836 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 802.0 1 1075.5 2 1349.0 3 5647.0 4 9945.0 5 6726.5 6 3508.0 7 3611.0 8 3714.0 9 3885.0 10 4056.0 11 4140.5 12 4225.0 13 4324.5 14 4424.0 15 4241.0 16 4058.0 17 4022.0 18 3986.0 19 3839.5 20 3693.0 21 4031.5 22 4370.0 23 4646.5 24 4923.0 25 5492.0 26 7232.0 27 8403.0 28 10422.5 29 12442.0 30 14168.5 31 15895.0 32 17836.5 33 19778.0 34 23318.0 35 26858.0 36 28153.0 37 29448.0 38 33598.5 39 37749.0 40 43221.5 41 48694.0 42 54347.0 43 60000.0 44 62936.5 45 65873.0 46 69434.0 47 72995.0 48 76212.0 49 79429.0 50 77672.5 51 75916.0 52 70554.0 53 65192.0 54 60580.0 55 55968.0 56 53140.0 57 50312.0 58 46015.5 59 41719.0 60 39069.0 61 36419.0 62 33317.0 63 30215.0 64 26772.0 65 23329.0 66 20224.0 67 17119.0 68 14488.0 69 11857.0 70 9828.0 71 7799.0 72 6584.5 73 5370.0 74 4842.5 75 3452.0 76 2589.0 77 1891.0 78 1193.0 79 955.5 80 718.0 81 512.5 82 307.0 83 199.5 84 92.0 85 66.5 86 41.0 87 27.5 88 14.0 89 9.5 90 5.0 91 4.0 92 3.0 93 3.5 94 4.0 95 2.5 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 967176.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.23468813734474 #Duplication Level Percentage of deduplicated Percentage of total 1 73.54688257645503 23.707608233259418 2 7.443453826860792 4.798748255471659 3 3.3792224788490324 3.267845482572108 4 2.1567322914583054 2.7808637124359747 5 1.5590132339213614 2.5127152698724182 6 1.2542333945891602 2.4257893395614896 7 1.0348297296297762 2.3350189526908025 8 0.901787908563272 2.325508159885234 9 0.7362984852464979 2.136091684312817 >10 7.871948611811484 49.72527721202472 >50 0.09056786221934982 1.808663874849517 >100 0.023712253006690127 1.365120513993674 >500 9.880105419395567E-4 0.17474052150445707 >1k 0.0 0.0 >5k 3.2933684731318555E-4 0.6360087875657364 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5991 0.6194322439762774 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.04342539517109606 0.0 2 0.0 0.0 0.0 0.14247665368040563 0.0 3 0.0 0.0 0.0 0.2306715633969412 0.0 4 0.0 0.0 0.0 0.410680165760937 0.0 5 0.0 0.0 0.0 0.6886026948559517 0.0 6 0.0 0.0 0.0 1.3335732069447546 0.0 7 0.0 0.0 0.0 1.6436512072259857 0.0 8 0.0 0.0 0.0 2.424170988527424 0.0 9 0.0 0.0 0.0 2.8147927574712357 0.0 10 0.0 0.0 0.0 3.3367246499086 0.0 11 0.0 0.0 0.0 3.7396502808175556 0.0 12 0.0 0.0 0.0 4.074129217433022 0.0 13 0.0 0.0 0.0 4.25000206787596 0.0 14 0.0 0.0 0.0 4.3462616938385565 0.0 15 0.0 0.0 0.0 4.435283753939304 0.0 16 0.0 0.0 0.0 4.586342092855902 0.0 17 0.0 0.0 0.0 4.755390952629098 0.0 18 0.0 0.0 0.0 4.9847183966516955 0.0 19 0.0 0.0 0.0 5.102070357411681 0.0 20 0.0 0.0 0.0 5.232966905713128 0.0 21 0.0 0.0 0.0 5.384749001215911 0.0 22 0.0 0.0 0.0 5.5522469540187105 0.0 23 0.0 0.0 0.0 5.746627294308378 0.0 24 0.0 0.0 0.0 5.906577499855248 0.0 25 0.0 0.0 0.0 6.043884463634333 0.0 26 0.0 0.0 0.0 6.182121971595656 0.0 27 0.0 0.0 0.0 6.321806992729348 0.0 28 0.0 0.0 0.0 6.46469722160186 0.0 29 0.0 0.0 0.0 6.618650586863198 0.0 30 0.0 0.0 0.0 6.816546316285764 0.0 31 0.0 0.0 1.0339379802641919E-4 6.974221858276053 0.0 32 0.0 0.0 1.0339379802641919E-4 7.1600205133295285 0.0 33 0.0 0.0 1.0339379802641919E-4 7.338478208723128 0.0 34 0.0 0.0 1.0339379802641919E-4 7.506493130516059 0.0 35 0.0 0.0 1.0339379802641919E-4 7.69415287393401 0.0 36 0.0 0.0 1.0339379802641919E-4 7.861444039140756 0.0 37 0.0 0.0 1.0339379802641919E-4 8.036489739199483 0.0 38 0.0 0.0 1.0339379802641919E-4 8.256201560005625 0.0 39 0.0 0.0 1.0339379802641919E-4 8.587888864074378 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGATCT 20 7.032731E-4 45.0 36 CGTTTTT 3495 0.0 40.236053 1 CGCAGTA 85 0.0 39.705883 37 GCGATTT 160 0.0 39.375 9 CATACGA 150 0.0 39.0 18 GCCGATG 170 0.0 38.382355 9 ACGGGAT 360 0.0 38.125 5 GGCGATA 455 0.0 37.582417 8 CACGACC 780 0.0 37.5 27 TAACGCC 30 1.1397882E-4 37.499996 12 GACACGA 785 0.0 37.261147 25 AACACGT 685 0.0 37.116787 41 AAGGGAT 1255 0.0 37.111553 5 GGCGATT 540 0.0 37.083336 8 GCGTATG 85 0.0 37.058826 1 ACACGAC 790 0.0 37.02532 26 AGGGCGA 1150 0.0 36.978264 6 GCGGGAT 445 0.0 36.91011 5 ACGACCA 800 0.0 36.5625 28 ATTGGGA 870 0.0 36.465515 4 >>END_MODULE