##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547121_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1444144 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.461474755980014 31.0 31.0 33.0 30.0 34.0 2 31.839093608393622 31.0 31.0 34.0 30.0 34.0 3 31.96537949124187 33.0 31.0 34.0 30.0 34.0 4 35.72022665329773 37.0 35.0 37.0 33.0 37.0 5 35.65803756412103 37.0 35.0 37.0 33.0 37.0 6 35.71158762561074 37.0 35.0 37.0 33.0 37.0 7 36.054274365991205 37.0 35.0 37.0 35.0 37.0 8 34.73779761575023 37.0 35.0 37.0 33.0 37.0 9 37.04310096500072 39.0 37.0 39.0 34.0 39.0 10 36.81021006215447 39.0 37.0 39.0 32.0 39.0 11 36.83249869819076 39.0 37.0 39.0 33.0 39.0 12 36.59701871835496 39.0 35.0 39.0 32.0 39.0 13 36.53496396481237 39.0 35.0 39.0 32.0 39.0 14 37.63806725645088 40.0 36.0 41.0 33.0 41.0 15 37.78788888088722 40.0 36.0 41.0 33.0 41.0 16 37.81501567710699 40.0 36.0 41.0 33.0 41.0 17 37.723983203891024 40.0 36.0 41.0 33.0 41.0 18 37.6670553629001 39.0 36.0 41.0 33.0 41.0 19 37.615142949733546 39.0 36.0 41.0 33.0 41.0 20 37.50598416778382 39.0 35.0 41.0 32.0 41.0 21 37.411740103479985 39.0 35.0 41.0 32.0 41.0 22 37.323185222526284 39.0 35.0 41.0 32.0 41.0 23 37.24661391107812 39.0 35.0 41.0 32.0 41.0 24 37.12085290663535 39.0 35.0 41.0 32.0 41.0 25 37.01123225938687 39.0 35.0 41.0 32.0 41.0 26 36.926284359454456 39.0 35.0 41.0 31.0 41.0 27 36.82601111800485 39.0 35.0 41.0 31.0 41.0 28 36.853838675367555 39.0 35.0 41.0 31.0 41.0 29 36.81777578967194 39.0 35.0 41.0 31.0 41.0 30 36.7652976434483 39.0 35.0 41.0 31.0 41.0 31 36.68096879535559 39.0 35.0 41.0 31.0 41.0 32 36.619256805415525 39.0 35.0 41.0 31.0 41.0 33 36.521509627848744 39.0 35.0 41.0 30.0 41.0 34 36.37497922644833 39.0 35.0 41.0 30.0 41.0 35 36.26892193576264 39.0 35.0 41.0 30.0 41.0 36 36.1449903887701 39.0 35.0 41.0 30.0 41.0 37 36.120189537885416 39.0 35.0 41.0 30.0 41.0 38 36.023823109052834 38.0 35.0 41.0 30.0 41.0 39 35.946509489358405 38.0 35.0 41.0 29.0 41.0 40 35.8084602366523 38.0 35.0 41.0 29.0 41.0 41 35.730623815907556 38.0 35.0 40.0 29.0 41.0 42 35.671683710211724 38.0 35.0 40.0 28.0 41.0 43 35.59902890570469 38.0 35.0 40.0 28.0 41.0 44 35.477811769463436 38.0 35.0 40.0 28.0 41.0 45 35.34865151951606 38.0 34.0 40.0 27.0 41.0 46 35.27185862351677 38.0 34.0 40.0 27.0 41.0 47 35.2037338381768 37.0 34.0 40.0 27.0 41.0 48 35.13297358158189 37.0 34.0 40.0 27.0 41.0 49 35.0677993330305 37.0 34.0 40.0 27.0 41.0 50 34.95763026401799 37.0 34.0 40.0 27.0 41.0 51 34.605870328720684 36.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 3.0 10 1.0 11 2.0 12 5.0 13 12.0 14 15.0 15 39.0 16 106.0 17 228.0 18 494.0 19 903.0 20 1699.0 21 2789.0 22 4015.0 23 6270.0 24 9149.0 25 12962.0 26 17343.0 27 21122.0 28 23748.0 29 26607.0 30 31560.0 31 38306.0 32 48058.0 33 62809.0 34 101675.0 35 149262.0 36 115412.0 37 152631.0 38 223947.0 39 392726.0 40 246.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.01260539115213 24.878751703431238 27.45294098095481 13.655701924461827 2 31.844469803565296 25.662399317519586 29.082072147929843 13.411058730985276 3 29.782625555346282 25.763220288281502 30.710718598699298 13.74343555767292 4 25.89540932206207 28.628377779501214 30.052612481857764 15.423600416578957 5 23.191593082130314 32.251769906602114 29.31868290142811 15.237954109839464 6 22.106451988167386 40.60682314229052 26.635017006614298 10.651707862927797 7 88.49256029869598 3.45083315791223 6.336694955627693 1.719911587764101 8 86.26002670093841 5.641473426472706 5.982159673827541 2.116340198761342 9 83.0357637465516 4.697730974196479 9.05242136518242 3.214083914069511 10 38.797793017870795 24.994252650705192 23.13778958331025 13.070164748113761 11 34.671888675921515 25.38708051274665 22.998260561273668 16.942770250058167 12 29.565334204899234 23.394896907787587 28.19074829102915 18.849020596284028 13 23.850807121727474 28.38449628291915 29.234134546139444 18.530562049213927 14 20.990981508769206 29.928386642883257 29.87340597613534 19.207225872212188 15 20.537494875857256 24.265308722675854 36.38529121749632 18.811905183970573 16 23.114730940958797 22.676755226625602 34.6015355809393 19.606978251476306 17 23.41296989773873 22.73471343577926 28.642780775324344 25.20953589115767 18 24.72260384006027 23.501257492327635 30.967064226282144 20.80907444132995 19 27.162249747947577 25.069106681882143 26.968917227090927 20.79972634307936 20 28.794081476639448 25.042724271263804 25.957383751204866 20.20581050089188 21 25.967909017383306 26.234572175627914 28.200719595829778 19.596799211158995 22 25.390888997219115 23.302939319070674 28.12205708018037 23.184114603529842 23 23.24331922578358 26.99003700462004 27.4396459078873 22.32699786170908 24 22.92444520768012 25.036492205763416 32.045834764400226 19.99322782215624 25 22.746762095746682 26.09732824427481 29.465136440687356 21.690773219291152 26 21.427987790691233 28.190817536201372 27.844176204035055 22.537018469072336 27 21.694927929624747 27.230733223279675 28.739654771269347 22.33468407582623 28 20.526969609678815 27.225262854673772 30.9534229273535 21.294344608293912 29 21.348494332975104 25.63297011932328 30.72048216798325 22.298053379718365 30 22.54747449007855 26.980411925680542 29.895010469870044 20.577103114370864 31 25.844029404269936 26.41467886858928 26.747194185621375 20.994097541519405 32 25.966731849455453 25.777207813071275 27.104568519482818 21.15149181799045 33 25.406815386831227 25.723542804595663 26.664723185499504 22.2049186230736 34 22.006877430505543 26.67774127787811 29.005348497102784 22.310032794513564 35 22.828471398974063 26.776415648301 29.09072779445817 21.304385158266765 36 25.724789217695744 26.85971759048959 26.571865409543648 20.84362778227102 37 22.879851316766196 28.28824549352419 27.364514896021447 21.467388293688163 38 23.586221318649663 28.349181245083592 26.716795555013906 21.34780188125284 39 22.89584695155054 27.26494033835961 27.0459178586069 22.793294851482955 40 24.345425386942022 25.35093453284437 27.825272272017195 22.478367808196413 41 21.50304955738486 25.382164105518562 28.035569860069355 25.079216477027224 42 22.7572181167529 26.540843572386137 26.6394486976368 24.062489613224166 43 22.193839395517344 25.32406740602045 28.00766405566204 24.474429142800165 44 22.038453229040872 26.402976434482987 28.294893030057942 23.263677306418195 45 21.206680220255045 28.00655613290641 27.197495540610912 23.589268106227635 46 23.30079271873165 27.36209131499352 27.597455655391705 21.739660310883124 47 22.478298563024186 26.517369459001316 28.554631671079893 22.449700306894606 48 22.76289622087548 25.84520657219779 29.28883823219845 22.10305897472828 49 22.75050133504692 25.32261325740369 29.24258245715109 22.6843029503983 50 21.720964114381946 27.958430738208932 28.68287373004354 21.63773141736558 51 21.52887800662538 27.63380937081067 27.49559600704639 23.341716615517566 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 945.0 1 1520.5 2 2096.0 3 7481.0 4 12866.0 5 9036.0 6 5206.0 7 5286.5 8 5367.0 9 5662.0 10 5957.0 11 6147.0 12 6337.0 13 6455.0 14 6573.0 15 6354.0 16 6135.0 17 5971.5 18 5808.0 19 5795.0 20 5782.0 21 5920.5 22 6059.0 23 7190.0 24 8321.0 25 8838.5 26 11411.0 27 13466.0 28 15019.0 29 16572.0 30 19874.0 31 23176.0 32 26856.5 33 30537.0 34 35395.0 35 40253.0 36 43336.0 37 46419.0 38 51814.0 39 57209.0 40 66360.0 41 75511.0 42 84198.5 43 92886.0 44 97301.5 45 101717.0 46 105850.5 47 109984.0 48 113310.0 49 116636.0 50 111676.5 51 106717.0 52 100139.5 53 93562.0 54 86620.0 55 79678.0 56 75663.5 57 71649.0 58 67510.5 59 63372.0 60 60004.5 61 56637.0 62 51979.5 63 47322.0 64 42203.0 65 37084.0 66 31239.5 67 25395.0 68 21644.5 69 17894.0 70 15315.0 71 12736.0 72 10691.0 73 8646.0 74 7143.5 75 4624.0 76 3607.0 77 2643.5 78 1680.0 79 1195.0 80 710.0 81 545.0 82 380.0 83 248.5 84 117.0 85 97.5 86 78.0 87 61.0 88 44.0 89 27.0 90 10.0 91 7.5 92 5.0 93 5.0 94 5.0 95 2.5 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1444144.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.658149165774407 #Duplication Level Percentage of deduplicated Percentage of total 1 76.01361754240976 19.503687375332756 2 6.184017261722509 3.1734087468999985 3 2.577496366285338 1.9840135872117213 4 1.5718456936472465 1.6132260509272474 5 1.2137916500019426 1.5571823605960644 6 0.9812208017258585 1.5105785817145696 7 0.8264295723379748 1.4843257269438435 8 0.6986777826574985 1.4341423012990886 9 0.6251000140338205 1.4435018463246696 >10 8.448760550063938 50.62557035918368 >50 0.8148985698797052 12.994511152081737 >100 0.04109019431452331 1.7346769410998553 >500 0.0027763644727453354 0.4369639167680929 >1k 0.0 0.0 >5k 2.7763644727453354E-4 0.504211053616655 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7078 0.49011732901982075 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.0773551667977708E-4 0.0 0.0 0.039469748169157645 0.0 2 2.0773551667977708E-4 0.0 0.0 0.14126015134224842 0.0 3 2.0773551667977708E-4 0.0 0.0 0.22290020939740082 0.0 4 2.0773551667977708E-4 0.0 0.0 0.39365880410817755 0.0 5 2.0773551667977708E-4 0.0 0.0 0.6663462923364983 0.0 6 2.0773551667977708E-4 0.0 0.0 1.1997418539979392 0.0 7 2.0773551667977708E-4 0.0 0.0 1.437114304390698 0.0 8 2.0773551667977708E-4 0.0 0.0 1.964208555379519 0.0 9 2.0773551667977708E-4 0.0 0.0 2.229902281212954 0.0 10 2.0773551667977708E-4 0.0 0.0 2.6621306462513434 0.0 11 2.0773551667977708E-4 0.0 0.0 3.010433862551103 0.0 12 2.0773551667977708E-4 0.0 0.0 3.287830022490832 0.0 13 2.0773551667977708E-4 0.0 0.0 3.438992233461483 0.0 14 2.0773551667977708E-4 0.0 0.0 3.5078219346547157 0.0 15 2.0773551667977708E-4 0.0 0.0 3.5864844503041247 0.0 16 2.0773551667977708E-4 0.0 0.0 3.7404857133360663 0.0 17 2.0773551667977708E-4 0.0 0.0 3.899888099801682 0.0 18 2.0773551667977708E-4 0.0 0.0 4.1159330371486496 0.0 19 2.0773551667977708E-4 0.0 0.0 4.227417764433464 0.0 20 2.0773551667977708E-4 0.0 0.0 4.337794568962652 0.0 21 2.0773551667977708E-4 0.0 0.0 4.4853560309775204 0.0 22 2.0773551667977708E-4 0.0 0.0 4.64385823020419 0.0 23 2.0773551667977708E-4 0.0 0.0 4.8175943673207104 0.0 24 2.0773551667977708E-4 0.0 0.0 4.960100931763037 0.0 25 2.0773551667977708E-4 0.0 0.0 5.088412235898913 0.0 26 2.0773551667977708E-4 0.0 0.0 5.209245061434316 0.0 27 2.0773551667977708E-4 0.0 0.0 5.335686745920074 0.0 28 2.0773551667977708E-4 0.0 0.0 5.4624746562669655 0.0 29 2.0773551667977708E-4 0.0 0.0 5.60054952968679 0.0 30 2.0773551667977708E-4 0.0 0.0 5.779340564375851 0.0 31 2.0773551667977708E-4 0.0 0.0 5.922193354679312 0.0 32 2.0773551667977708E-4 0.0 0.0 6.081803476661607 0.0 33 2.0773551667977708E-4 0.0 0.0 6.228810977298663 0.0 34 2.0773551667977708E-4 0.0 0.0 6.3842663889473625 0.0 35 2.0773551667977708E-4 0.0 0.0 6.553293854352474 0.0 36 2.0773551667977708E-4 0.0 0.0 6.703486632911954 0.0 37 2.0773551667977708E-4 0.0 0.0 6.8609501545552245 0.0 38 2.0773551667977708E-4 0.0 0.0 7.041541563722177 0.0 39 2.0773551667977708E-4 0.0 0.0 7.2879158865043925 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGTCGTA 20 7.0338894E-4 45.0 18 GCCGTAT 20 7.0338894E-4 45.0 41 TCTAGCG 65 0.0 41.53846 1 CGGGATA 200 0.0 39.375 6 CGTTTTT 5035 0.0 39.056606 1 GGGCGAT 3375 0.0 37.86667 7 AGGGCGA 1725 0.0 37.695652 6 TAGGGTC 735 0.0 37.65306 5 CCCGTAG 30 1.14006696E-4 37.499996 35 AGGGTAC 735 0.0 37.34694 6 CACGTGA 650 0.0 36.692307 43 GCGGGAT 475 0.0 36.473686 5 CACGACC 685 0.0 36.459854 27 GGTACCT 710 0.0 36.443665 8 CACAACG 315 0.0 36.42857 12 AAGGGCG 680 0.0 36.39706 5 ACGACCA 690 0.0 36.195652 28 GTCGTAT 25 0.002107287 36.0 19 TATTACG 50 4.8805305E-8 36.0 1 ACTCGCT 25 0.002107287 36.0 20 >>END_MODULE