##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547120_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1090652 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.53538067137822 31.0 31.0 33.0 30.0 34.0 2 31.9044030543198 31.0 31.0 34.0 30.0 34.0 3 31.97699999633247 33.0 31.0 34.0 30.0 34.0 4 35.76154997194339 37.0 35.0 37.0 35.0 37.0 5 35.7150200063815 37.0 35.0 37.0 33.0 37.0 6 35.765003869245184 37.0 35.0 37.0 33.0 37.0 7 36.075953649743454 37.0 35.0 37.0 35.0 37.0 8 34.76202308344 37.0 35.0 37.0 35.0 37.0 9 37.082500192545375 39.0 37.0 39.0 34.0 39.0 10 36.9877101036811 39.0 37.0 39.0 32.0 39.0 11 36.949345895849454 39.0 37.0 39.0 33.0 39.0 12 36.74447303081093 39.0 35.0 39.0 33.0 39.0 13 36.740838507608295 39.0 35.0 39.0 33.0 39.0 14 37.87041971224552 40.0 36.0 41.0 33.0 41.0 15 37.97322885760077 40.0 36.0 41.0 33.0 41.0 16 37.98131576341491 40.0 36.0 41.0 33.0 41.0 17 37.85817107565016 40.0 36.0 41.0 33.0 41.0 18 37.74392656869469 39.0 36.0 41.0 33.0 41.0 19 37.65366496370978 39.0 36.0 41.0 33.0 41.0 20 37.51019390236299 39.0 35.0 41.0 33.0 41.0 21 37.42682175432677 39.0 35.0 41.0 33.0 41.0 22 37.34281145589977 39.0 35.0 41.0 32.0 41.0 23 37.24778572816994 39.0 35.0 41.0 32.0 41.0 24 37.10940153229444 39.0 35.0 41.0 32.0 41.0 25 37.0139228644884 39.0 35.0 41.0 32.0 41.0 26 36.91054983624474 39.0 35.0 41.0 32.0 41.0 27 36.803710074340856 39.0 35.0 41.0 31.0 41.0 28 36.819201725206575 39.0 35.0 41.0 31.0 41.0 29 36.749614909246944 39.0 35.0 41.0 31.0 41.0 30 36.65510355273726 38.0 35.0 41.0 31.0 41.0 31 36.543232855209546 38.0 35.0 41.0 31.0 41.0 32 36.41259265100142 39.0 35.0 41.0 30.0 41.0 33 36.20074230827065 39.0 35.0 41.0 30.0 41.0 34 35.94914326476273 39.0 35.0 41.0 29.0 41.0 35 35.778836879224535 39.0 35.0 41.0 28.0 41.0 36 35.646719576913625 38.0 35.0 41.0 27.0 41.0 37 35.61654221511536 38.0 35.0 41.0 27.0 41.0 38 35.49926649380371 38.0 35.0 41.0 27.0 41.0 39 35.407816608780806 38.0 35.0 41.0 26.0 41.0 40 35.26350476595651 38.0 35.0 40.0 26.0 41.0 41 35.15482757103091 38.0 34.0 40.0 25.0 41.0 42 35.07716576873283 38.0 34.0 40.0 25.0 41.0 43 34.979780901699165 38.0 34.0 40.0 25.0 41.0 44 34.846304779159624 37.0 34.0 40.0 24.0 41.0 45 34.72505070361582 37.0 34.0 40.0 24.0 41.0 46 34.63749115208151 37.0 34.0 40.0 23.0 41.0 47 34.559969632843476 37.0 34.0 40.0 23.0 41.0 48 34.47401370923081 37.0 34.0 40.0 23.0 41.0 49 34.382891151348 36.0 34.0 40.0 24.0 41.0 50 34.295484719232164 36.0 34.0 40.0 24.0 41.0 51 33.952509141320974 36.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 3.0 11 2.0 12 1.0 13 10.0 14 12.0 15 37.0 16 80.0 17 175.0 18 419.0 19 775.0 20 1433.0 21 2279.0 22 3498.0 23 5414.0 24 8066.0 25 12023.0 26 17269.0 27 20323.0 28 20800.0 29 21850.0 30 24331.0 31 29086.0 32 35760.0 33 46313.0 34 75185.0 35 104142.0 36 90390.0 37 119017.0 38 170938.0 39 280826.0 40 194.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.18771523822448 23.107095572189845 26.343508286786253 16.361680902799428 2 34.822106409743895 24.424747765556752 27.397098249487463 13.35604757521189 3 29.577262041421093 24.753816982868962 32.31608249010684 13.352838485603108 4 25.746800996101417 27.174295742363284 32.18295111547955 14.895952146055755 5 22.55091449885023 31.193451256679488 31.113224016459878 15.1424102280104 6 21.395825616236895 40.0035024920873 28.41492978511936 10.185742106556445 7 85.58339415322212 3.4997414390658066 9.298566362139345 1.61829804557274 8 83.07113543091656 5.833574779122946 8.90311483406256 2.19217495589794 9 80.34065861521366 4.829496484671554 11.513204945298776 3.316639954816018 10 39.73302208220404 25.8262030418502 20.5878685410195 13.852906334926265 11 32.423082706491165 25.716177112406157 25.110942812189407 16.749797368913274 12 27.6060558271566 23.077480259514495 30.661475887817563 18.654988025511347 13 24.131895416686532 24.928483145861374 32.0364332527699 18.90318818468219 14 21.699772246326052 26.24741897507179 32.81229943189945 19.240509346702705 15 21.639166296857294 23.02118365894896 35.86689429808958 19.472755746104163 16 24.384771677858748 21.860226726765276 34.34285179874057 19.412149796635408 17 24.26777743954992 22.235415146169444 30.911143059380997 22.585664354899638 18 25.183101484249786 22.43703766187565 31.977477692242807 20.402383161631757 19 27.539031698470275 24.49415578938103 28.26703659829166 19.69977591385703 20 28.907479195930506 24.16609514308872 27.617608549748223 19.30881711123255 21 27.53105481858558 24.575116535796937 29.240491009047798 18.653337636569685 22 26.196073541331238 22.179668675251136 29.546729846000375 22.07752793741725 23 24.793793070566963 25.00806856815923 28.840180002420567 21.357958358853235 24 23.855363580683846 24.010958582572623 32.07521739289893 20.0584604438446 25 24.325999493880722 24.24833952534814 29.945207087136865 21.480453893634266 26 22.193605292980713 25.57891976542472 29.563142047142442 22.664332894452127 27 22.629307973579106 24.34607922600426 30.366973150005684 22.657639650410946 28 22.058548464588153 25.585154568093216 30.959462780061838 21.396834187256797 29 22.95700186677327 24.317747549172424 31.063253906837378 21.66199667721693 30 24.183607603525232 24.172054880933608 31.326582631306778 20.317754884234386 31 26.167100046577644 24.503507993383774 28.565848685006767 20.763543275031815 32 26.185712766308594 23.949894191731186 28.882356608707454 20.98203643325277 33 26.27465039260919 24.7049471325409 27.59633687005571 21.424065604794194 34 23.367306895324997 26.21615327345478 29.499418696339436 20.917121134880787 35 23.85059579040794 26.277401040845294 29.13358248093801 20.73842068780876 36 25.824460964634 27.732035516370026 26.208634834942767 20.234868684053207 37 24.54522615829797 27.596611934879324 26.8315649721451 21.026596934677606 38 24.538532914256795 27.94246010643175 26.875758720471794 20.643248258839666 39 24.037914935286416 27.052258648954936 26.175718744384092 22.734107671374552 40 24.713199077249204 25.519780828348548 27.7994263981545 21.96759369624775 41 22.212126324437126 25.730113730135734 27.888914154102316 24.168845791324824 42 23.40508246443412 26.247877416444474 26.81286056413962 23.53417955498179 43 22.80452426621874 25.310181432757656 28.24081375177417 23.64448054924944 44 22.731265334863917 25.88424171963193 28.258326212210676 23.12616673329348 45 22.64122744926888 26.209826782511747 27.7477142113158 23.401231556903575 46 23.473481917238495 26.320677906426614 28.00334112072412 22.202499055610772 47 22.992118475920826 26.06248372533127 29.05555575930728 21.88984203944063 48 22.98423328431067 25.73919086931487 29.35629329978765 21.92028254658681 49 23.40920843678827 25.19832173782288 29.190520899425298 22.201948925963553 50 22.56998565995386 26.20359197984325 29.119370798384818 22.107051561818068 51 22.37111379248376 26.531469249586486 28.244297906206562 22.85311905172319 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 905.0 1 1443.0 2 1981.0 3 10467.0 4 18953.0 5 12989.5 6 7026.0 7 7035.5 8 7045.0 9 7182.0 10 7319.0 11 7435.5 12 7552.0 13 7340.5 14 7129.0 15 6903.5 16 6678.0 17 6426.0 18 6174.0 19 6014.5 20 5855.0 21 5991.5 22 6128.0 23 6288.5 24 6449.0 25 7004.0 26 8499.0 27 9439.0 28 10441.0 29 11443.0 30 14003.0 31 16563.0 32 18670.0 33 20777.0 34 23704.0 35 26631.0 36 29325.0 37 32019.0 38 34424.5 39 36830.0 40 41864.0 41 46898.0 42 50969.5 43 55041.0 44 58182.0 45 61323.0 46 65494.5 47 69666.0 48 72961.5 49 76257.0 50 75387.5 51 74518.0 52 71181.5 53 67845.0 54 65317.5 55 62790.0 56 61175.5 57 59561.0 58 57569.0 59 55577.0 60 53875.5 61 52174.0 62 48043.0 63 43912.0 64 39844.5 65 35777.0 66 30937.0 67 26097.0 68 22203.5 69 18310.0 70 15471.0 71 12632.0 72 10695.0 73 8758.0 74 7382.0 75 4834.5 76 3663.0 77 2735.5 78 1808.0 79 1350.5 80 893.0 81 644.0 82 395.0 83 270.0 84 145.0 85 116.5 86 88.0 87 64.5 88 41.0 89 26.5 90 12.0 91 8.0 92 4.0 93 3.0 94 2.0 95 2.0 96 2.0 97 1.5 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1090652.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.399647183394 #Duplication Level Percentage of deduplicated Percentage of total 1 70.71132690117 22.203107165663745 2 6.656339042258998 4.180133949199665 3 3.5320408937196666 3.327145137003515 4 2.520356590296561 3.165532308466157 5 2.059229828643239 3.2329545044459294 6 1.646830097163619 3.1025930413159255 7 1.4668537169058906 3.224108242634655 8 1.2519108375782164 3.1447646884018616 9 1.1356088493976662 3.2091945488484055 >10 8.947832333904627 47.72373550772989 >50 0.047183854647715275 0.9614129561599238 >100 0.023889809087520714 1.467351129317077 >500 2.98622613150346E-4 0.05232167739198442 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 2.98622613150346E-4 1.0056451434212057 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10725 0.9833567444060984 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 9.168827453669915E-5 0.0 0.0 0.034016349853115385 0.0 2 9.168827453669915E-5 0.0 0.0 0.11222644803291976 0.0 3 9.168827453669915E-5 0.0 0.0 0.19951368539185735 0.0 4 9.168827453669915E-5 0.0 0.0 0.29294403714475375 0.0 5 9.168827453669915E-5 0.0 0.0 0.4528483879367571 0.0 6 9.168827453669915E-5 0.0 0.0 0.8534344593875957 0.0 7 9.168827453669915E-5 0.0 0.0 1.0498307434452052 0.0 8 9.168827453669915E-5 0.0 0.0 1.5166157491115406 0.0 9 9.168827453669915E-5 0.0 0.0 1.7595896766337933 0.0 10 9.168827453669915E-5 0.0 0.0 2.0704129273132037 0.0 11 9.168827453669915E-5 0.0 0.0 2.2926653047901624 0.0 12 9.168827453669915E-5 0.0 0.0 2.4663228967626702 0.0 13 9.168827453669915E-5 0.0 0.0 2.575248566912269 0.0 14 9.168827453669915E-5 0.0 0.0 2.642547760422206 0.0 15 9.168827453669915E-5 0.0 0.0 2.6989360492622763 0.0 16 9.168827453669915E-5 0.0 0.0 2.781913937717989 0.0 17 9.168827453669915E-5 0.0 0.0 2.8698429929986835 0.0 18 9.168827453669915E-5 0.0 0.0 2.987479049229268 0.0 19 9.168827453669915E-5 0.0 0.0 3.052119282777641 0.0 20 9.168827453669915E-5 0.0 0.0 3.1253782141324638 0.0 21 9.168827453669915E-5 0.0 0.0 3.215232723178429 0.0 22 9.168827453669915E-5 0.0 0.0 3.3162732017178715 0.0 23 9.168827453669915E-5 0.0 0.0 3.424740430494787 0.0 24 9.168827453669915E-5 0.0 0.0 3.520646365660174 0.0 25 9.168827453669915E-5 0.0 0.0 3.605458019606621 0.0 26 9.168827453669915E-5 0.0 0.0 3.694395645907219 0.0 27 9.168827453669915E-5 0.0 0.0 3.7915852169161197 0.0 28 9.168827453669915E-5 0.0 0.0 3.885932451414383 0.0 29 9.168827453669915E-5 0.0 0.0 3.9921074733278807 0.0 30 9.168827453669915E-5 0.0 0.0 4.11937079838482 0.0 31 9.168827453669915E-5 0.0 0.0 4.221419847944166 0.0 32 9.168827453669915E-5 0.0 0.0 4.343181876528902 0.0 33 9.168827453669915E-5 0.0 0.0 4.457883907974312 0.0 34 9.168827453669915E-5 0.0 0.0 4.5787290538136824 0.0 35 9.168827453669915E-5 0.0 0.0 4.708651338832185 0.0 36 9.168827453669915E-5 0.0 0.0 4.832797262554876 0.0 37 9.168827453669915E-5 0.0 0.0 4.965653572358552 0.0 38 9.168827453669915E-5 0.0 0.0 5.1295922072301705 0.0 39 9.168827453669915E-5 0.0 0.0 5.340933680037262 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 6505 0.0 41.679478 1 ATAACGC 55 6.184564E-11 40.909092 11 ATATACG 45 1.9281288E-8 40.0 1 AGGGCGT 105 0.0 38.57143 6 TACGGGA 305 0.0 38.360657 4 TACGGGT 135 0.0 38.333336 4 AAGGGCG 555 0.0 38.10811 5 TCACGAC 65 9.094947E-12 38.07692 25 GTCGTTT 65 9.094947E-12 38.07692 9 GCGCGAC 305 0.0 37.62295 9 ACGGGAC 210 0.0 37.500004 5 TAACGCC 60 1.5643309E-10 37.499996 12 CGGTCTA 60 1.5643309E-10 37.499996 31 AGGGCGA 1375 0.0 37.309093 6 CGTTAGG 145 0.0 37.241383 2 GGGCGAT 2610 0.0 37.068966 7 TATGGGT 425 0.0 36.52941 4 CACGACC 685 0.0 36.459854 27 ACGACCA 695 0.0 36.258995 28 AGGGATT 790 0.0 36.170887 6 >>END_MODULE