##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547119_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1072798 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.3851246926262 31.0 31.0 33.0 30.0 34.0 2 31.738257342015924 31.0 31.0 34.0 30.0 34.0 3 31.84695534480862 31.0 31.0 34.0 30.0 34.0 4 35.60442319989411 37.0 35.0 37.0 33.0 37.0 5 35.53375472362924 37.0 35.0 37.0 33.0 37.0 6 35.59214782279609 37.0 35.0 37.0 33.0 37.0 7 36.002722786582375 37.0 35.0 37.0 35.0 37.0 8 34.682325097548656 37.0 35.0 37.0 33.0 37.0 9 36.99258667521752 39.0 37.0 39.0 33.0 39.0 10 36.7345231814377 39.0 37.0 39.0 32.0 39.0 11 36.70674535187426 39.0 35.0 39.0 32.0 39.0 12 36.41184267681334 38.0 35.0 39.0 32.0 39.0 13 36.31539488328651 39.0 35.0 39.0 32.0 39.0 14 37.411204159590156 39.0 35.0 41.0 32.0 41.0 15 37.59313589324365 40.0 35.0 41.0 33.0 41.0 16 37.63343425323313 40.0 35.0 41.0 33.0 41.0 17 37.56219810253189 39.0 35.0 41.0 32.0 41.0 18 37.50089858482212 39.0 36.0 41.0 32.0 41.0 19 37.445581554029744 39.0 36.0 41.0 32.0 41.0 20 37.3248635810283 39.0 35.0 41.0 32.0 41.0 21 37.23637068674625 39.0 35.0 41.0 32.0 41.0 22 37.130067356575985 39.0 35.0 41.0 32.0 41.0 23 37.04998331465942 39.0 35.0 41.0 32.0 41.0 24 36.91963351907815 39.0 35.0 41.0 31.0 41.0 25 36.83566803815816 38.0 35.0 41.0 31.0 41.0 26 36.723362646089946 38.0 35.0 41.0 31.0 41.0 27 36.60840531022615 38.0 35.0 41.0 31.0 41.0 28 36.65184592066726 38.0 35.0 41.0 31.0 41.0 29 36.622630728245205 38.0 35.0 41.0 31.0 41.0 30 36.58603949671793 38.0 35.0 41.0 31.0 41.0 31 36.506183829574624 38.0 35.0 41.0 31.0 41.0 32 36.41367899641871 38.0 35.0 41.0 30.0 41.0 33 36.289043230878505 38.0 35.0 41.0 30.0 41.0 34 36.1621992211022 38.0 35.0 41.0 30.0 41.0 35 36.0562510370079 38.0 35.0 41.0 30.0 41.0 36 35.9242811787494 38.0 35.0 41.0 29.0 41.0 37 35.894269937117706 38.0 35.0 41.0 29.0 41.0 38 35.81556546526 38.0 35.0 41.0 29.0 41.0 39 35.73712665385282 38.0 35.0 41.0 29.0 41.0 40 35.60991817658124 38.0 35.0 40.0 28.0 41.0 41 35.53735279148544 38.0 35.0 40.0 27.0 41.0 42 35.50038217819198 38.0 35.0 40.0 27.0 41.0 43 35.42605318056148 38.0 35.0 40.0 27.0 41.0 44 35.32487663101534 38.0 34.0 40.0 27.0 41.0 45 35.213329070337565 38.0 34.0 40.0 27.0 41.0 46 35.13442605224842 38.0 34.0 40.0 26.0 41.0 47 35.070803636844964 38.0 34.0 40.0 26.0 41.0 48 34.989722203061525 37.0 34.0 40.0 26.0 41.0 49 34.91650991146516 37.0 34.0 40.0 26.0 41.0 50 34.815289551248235 37.0 34.0 40.0 26.0 41.0 51 34.440783819507494 36.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 4.0 13 7.0 14 5.0 15 26.0 16 76.0 17 199.0 18 414.0 19 821.0 20 1413.0 21 2340.0 22 3451.0 23 5173.0 24 7680.0 25 11135.0 26 14892.0 27 16939.0 28 18493.0 29 20529.0 30 24725.0 31 29775.0 32 37426.0 33 47891.0 34 77741.0 35 120669.0 36 81828.0 37 105851.0 38 157905.0 39 285184.0 40 204.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.648554527506576 24.44607465711159 27.80327703817494 13.10209377720689 2 31.58581578265433 26.478982995866886 28.46472495288023 13.47047626859856 3 29.425856498613907 25.391266575813898 31.480017673411027 13.70285925216117 4 25.616005995536906 28.29237190971646 31.184901537847757 14.906720556898875 5 22.125786960825803 33.35474152636377 30.637081724611715 13.88238978819871 6 20.02091726494643 42.07642072412514 27.806539534935748 10.096122475992685 7 87.5661587735995 3.890853636938175 6.882936023370663 1.6600515660916595 8 85.31084136995035 5.8841459435979555 6.224937033812516 2.5800756526391733 9 82.90992339657606 5.068148896623596 8.917242575023444 3.104685131776905 10 41.62358617372516 24.35202153620719 18.93795476874491 15.086437521322745 11 34.9273581792658 26.817164088672797 21.21583000714021 17.039647724921185 12 30.028486257431503 22.948029358742282 28.496138135977134 18.52734624784908 13 22.50582122636321 31.63643108954342 29.115360021178265 16.742387662915107 14 19.391814675269714 34.13643575025308 29.167093898385342 17.304655676091866 15 18.411201363164363 26.598763234085077 38.5045460562007 16.485489346549866 16 19.23912982686396 22.85779801975768 38.548170298602344 19.354901854776017 17 19.57153163969359 24.082446089571384 29.337303015106293 27.008719255628737 18 21.8474493800324 25.371598381055893 32.09523134830602 20.685720890605687 19 25.824432931455878 28.169422388930627 26.548893640741312 19.457251038872183 20 27.68368322834308 24.883715294025528 27.161124461455 20.27147701617639 21 23.689175408604417 28.24520552797451 27.580588330701588 20.485030732719487 22 23.38725463694004 25.812128657957977 26.612745363059958 24.187871342042026 23 21.591576419791984 29.69440658912489 26.11060050447521 22.603416486607916 24 21.208838942652765 26.026707730625898 32.951962997693876 19.81249032902746 25 20.527443190609976 27.520651604495903 30.480761522672488 21.47114368222163 26 20.423136508457322 30.934994285969957 27.981222932928663 20.66064627264406 27 21.06221301680279 30.028579471624667 27.8405627154413 21.068644796131238 28 19.836539590864263 28.92044914326835 31.895473332351475 19.34753793351591 29 20.14507857024342 26.2886396134221 31.14248907995727 22.423792736377212 30 21.580856787577904 28.416160358240788 29.403578306447255 20.599404547734057 31 24.641917676953163 27.144998406037296 26.20446719699328 22.008616720016256 32 25.80886616119717 26.723017753575228 27.594477245483308 19.873638839744295 33 24.657857303984535 27.202138706447997 26.144623684980772 21.995380304586696 34 20.834583957091642 27.46472308859636 29.2629180889599 22.437774865352097 35 21.798139071847636 25.86796395966435 28.925855566471974 23.408041402016035 36 25.207261758504394 26.623837852046705 27.36172140514803 20.807178984300865 37 21.772132311954348 29.27037522441317 28.432099985272156 20.525392478360324 38 21.961077481501643 29.494648573170345 27.146676261514287 21.39759768381373 39 21.658597424678273 28.67455010169668 27.72236711850693 21.94448535511811 40 23.209868027345316 26.386700944632636 27.811386672980376 22.592044355041676 41 19.3278697387579 25.780342618088405 29.139129640435574 25.752658002718125 42 22.161674425194676 27.004990687902104 26.82257051187642 24.0107643750268 43 21.68460418457156 26.61871107142258 28.306074396111853 23.39061034789401 44 21.53033469488198 28.2381212492939 28.103426740169162 22.12811731565495 45 20.73894619490342 30.234862481100823 25.76309799235271 23.263093331643052 46 21.982703174316136 29.844947511087828 26.797029822948957 21.375319491647076 47 22.591298641496348 27.111627724883903 27.8121323865257 22.48494124709405 48 22.625042179422408 25.42156118859282 29.1767881744746 22.776608457510175 49 21.96816176018225 25.358641608205833 29.439745413395624 23.233451218216292 50 20.46424396764349 28.105197809839318 28.4883081437512 22.942250078765994 51 19.646475850998975 28.892764527898073 27.141363052503824 24.31939656859912 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 866.0 1 1069.5 2 1273.0 3 5074.0 4 8875.0 5 6362.5 6 3850.0 7 4089.0 8 4328.0 9 4669.0 10 5010.0 11 5236.5 12 5463.0 13 5575.5 14 5688.0 15 5583.0 16 5478.0 17 5537.5 18 5597.0 19 5559.0 20 5521.0 21 5647.0 22 5773.0 23 5807.5 24 5842.0 25 6470.0 26 8005.5 27 8913.0 28 10508.0 29 12103.0 30 14282.0 31 16461.0 32 18912.0 33 21363.0 34 25174.5 35 28986.0 36 32201.0 37 35416.0 38 39740.5 39 44065.0 40 52921.0 41 61777.0 42 70363.0 43 78949.0 44 83275.5 45 87602.0 46 91225.5 47 94849.0 48 95679.5 49 96510.0 50 92426.0 51 88342.0 52 80397.5 53 72453.0 54 64457.0 55 56461.0 56 52538.5 57 48616.0 58 44881.0 59 41146.0 60 37286.5 61 33427.0 62 29028.0 63 24629.0 64 20288.0 65 15947.0 66 13628.5 67 11310.0 68 9511.0 69 7712.0 70 6796.0 71 5880.0 72 4802.5 73 3725.0 74 3044.0 75 1951.0 76 1539.0 77 1149.0 78 759.0 79 594.0 80 429.0 81 314.0 82 199.0 83 166.5 84 134.0 85 88.0 86 42.0 87 27.5 88 13.0 89 12.0 90 11.0 91 7.5 92 4.0 93 2.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1072798.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.551531685221395 #Duplication Level Percentage of deduplicated Percentage of total 1 76.44885456508848 23.35629602544183 2 6.939080962345366 4.2399910377482195 3 2.9416042342823157 2.696115449071727 4 1.8000277302655319 2.199744169419382 5 1.313624881834604 2.0066626099932554 6 1.0125175887354967 1.8560377916457895 7 0.8238623319255419 1.7619179296658505 8 0.6795652461625168 1.6609407320247527 9 0.6026240819353214 1.6569979860171982 >10 6.90249510940447 46.49910477617084 >50 0.4983732187460636 9.464142939651383 >100 0.03517181108173587 1.7101698115846171 >500 0.0018842041650766787 0.390676660461867 >1k 0.0 0.0 >5k 3.1403402751277974E-4 0.5012020811033383 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5224 0.48695094509870446 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.8642838633181643E-4 0.0 0.0 0.06646171972729256 0.0 2 1.8642838633181643E-4 0.0 0.0 0.23890797708422276 0.0 3 1.8642838633181643E-4 0.0 0.0 0.3699671326754897 0.0 4 1.8642838633181643E-4 0.0 0.0 0.6049601136467443 0.0 5 1.8642838633181643E-4 0.0 0.0 1.0029847184651723 0.0 6 1.8642838633181643E-4 0.0 0.0 1.7075908046062727 0.0 7 1.8642838633181643E-4 0.0 0.0 2.041204401947058 0.0 8 1.8642838633181643E-4 0.0 0.0 2.896631052630598 0.0 9 1.8642838633181643E-4 0.0 0.0 3.2869188794162554 0.0 10 1.8642838633181643E-4 0.0 0.0 3.942587514145254 0.0 11 1.8642838633181643E-4 0.0 0.0 4.491805540278785 0.0 12 1.8642838633181643E-4 0.0 0.0 4.9546140093475195 0.0 13 1.8642838633181643E-4 0.0 0.0 5.19585234126089 0.0 14 1.8642838633181643E-4 0.0 0.0 5.307150087900984 0.0 15 1.8642838633181643E-4 0.0 0.0 5.426464255153347 0.0 16 1.8642838633181643E-4 0.0 0.0 5.667609372873551 0.0 17 1.8642838633181643E-4 0.0 0.0 5.93690517692986 0.0 18 1.8642838633181643E-4 0.0 0.0 6.295779820618606 0.0 19 1.8642838633181643E-4 0.0 0.0 6.475589999235644 0.0 20 1.8642838633181643E-4 0.0 0.0 6.6612726720221325 0.0 21 1.8642838633181643E-4 0.0 0.0 6.912205280024757 0.0 22 1.8642838633181643E-4 0.0 0.0 7.194457856931128 0.0 23 1.8642838633181643E-4 0.0 0.0 7.512504684013207 0.0 24 1.8642838633181643E-4 0.0 0.0 7.752624445608586 0.0 25 1.8642838633181643E-4 0.0 0.0 7.971211728582641 0.0 26 1.8642838633181643E-4 0.0 0.0 8.170690101957684 0.0 27 1.8642838633181643E-4 0.0 0.0 8.373430972093535 0.0 28 1.8642838633181643E-4 0.0 0.0 8.590992898942764 0.0 29 1.8642838633181643E-4 0.0 0.0 8.818808387040244 0.0 30 1.8642838633181643E-4 0.0 0.0 9.10320489038943 0.0 31 1.8642838633181643E-4 0.0 0.0 9.347239648097778 0.0 32 1.8642838633181643E-4 0.0 0.0 9.58046155939888 0.0 33 1.8642838633181643E-4 0.0 0.0 9.814988469404305 0.0 34 1.8642838633181643E-4 0.0 0.0 10.04746466716008 0.0 35 1.8642838633181643E-4 0.0 0.0 10.312472618330757 0.0 36 1.8642838633181643E-4 0.0 0.0 10.561820585049562 0.0 37 1.8642838633181643E-4 0.0 0.0 10.82449818139109 0.0 38 1.8642838633181643E-4 0.0 0.0 11.080277927438344 0.0 39 1.8642838633181643E-4 0.0 0.0 11.335405174133435 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGTGCG 35 1.211829E-7 45.0 1 CTCGCTA 25 3.8906306E-5 45.0 45 GTTCACG 20 7.033077E-4 45.0 1 CGGTCTA 20 7.033077E-4 45.0 31 ATACGAC 35 1.211829E-7 45.0 14 TCGACAG 20 7.033077E-4 45.0 1 AATACCG 20 7.033077E-4 45.0 35 TCGAAAG 40 6.8139343E-9 45.0 1 TCGATAG 60 3.6379788E-12 41.249996 1 CGTTTTT 4045 0.0 41.050682 1 CGTTCGA 50 1.0822987E-9 40.5 14 TGGGCGA 705 0.0 40.212765 6 AACGGGA 270 0.0 40.000004 4 TAACGGG 235 0.0 39.255318 3 TACGGGA 230 0.0 39.130432 4 GGCGATA 530 0.0 39.056602 8 TATGGGC 480 0.0 38.906246 4 TAGGGCG 465 0.0 38.709675 5 ACTGACG 35 6.2478994E-6 38.571426 1 CGCATCG 35 6.2478994E-6 38.571426 21 >>END_MODULE