SRR1547118_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547118_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	562435
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2966	0.5273498270911305	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	1434	0.2549627957008365	No Hit
GAGCTGTCTCTTATACACATCTGACGCCCGTGTATTCGTATGCCGTCTTCT	667	0.11859148168232773	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TATCACG	20	7.0302107E-4	45.0	1
ATTAGCG	20	7.0302107E-4	45.0	1
GTCGAAT	20	7.0302107E-4	45.0	13
ATAGGAC	20	7.0302107E-4	45.0	26
TGAAGCG	20	7.0302107E-4	45.0	1
GGCGTAT	25	3.888256E-5	45.0	8
TAGCGAA	20	7.0302107E-4	45.0	29
TAACGCG	20	7.0302107E-4	45.0	1
TGTTACG	45	3.8380676E-10	45.0	1
CGAATAT	35	1.2104465E-7	45.0	14
CCGACAG	20	7.0302107E-4	45.0	12
TGTAGCG	45	3.8380676E-10	45.0	1
GTCCCGT	20	7.0302107E-4	45.0	27
GCTACGA	35	1.2104465E-7	45.0	10
CTTTACG	25	3.888256E-5	45.0	1
CGCGTAA	35	1.2104465E-7	45.0	31
CGACTAA	35	1.2104465E-7	45.0	30
TAATGCG	20	7.0302107E-4	45.0	1
TCGAATC	25	3.888256E-5	45.0	14
GCGTAAC	35	1.2104465E-7	45.0	32