SRR1547117_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547117_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1199802
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5405	0.45049099768128414	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATTACGC	20	7.03341E-4	45.000004	18
CATAGCG	35	1.2119926E-7	45.000004	1
CGTAGAC	20	7.03341E-4	45.000004	28
CGAATTA	20	7.03341E-4	45.000004	17
CGGTCTA	70	0.0	41.785717	31
TACGTAG	65	0.0	41.538464	1
CACGATA	50	1.0822987E-9	40.500004	22
CGTTTTT	3670	0.0	39.114445	1
TAAACGG	75	0.0	39.000004	2
CATGCGG	105	0.0	38.57143	2
CGTTCGA	70	0.0	38.57143	14
TCTAGCG	35	6.248518E-6	38.57143	1
AGGGCGA	1270	0.0	38.44488	6
GGGCGAT	2825	0.0	38.150444	7
GTTAGCG	65	9.094947E-12	38.076927	1
CGTTAGG	130	0.0	38.076927	2
GGCGATA	640	0.0	37.61719	8
TATGGGA	880	0.0	37.585228	4
TATAGCG	60	1.5643309E-10	37.500004	1
GTACGTC	30	1.1399516E-4	37.500004	16