##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547117_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1199802 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.42105197357564 31.0 31.0 33.0 30.0 34.0 2 31.784892007181185 31.0 31.0 34.0 30.0 34.0 3 31.907365548648862 31.0 31.0 34.0 30.0 34.0 4 35.65821610565743 37.0 35.0 37.0 33.0 37.0 5 35.596265050399985 37.0 35.0 37.0 33.0 37.0 6 35.64324030131638 37.0 35.0 37.0 33.0 37.0 7 35.987259564494806 37.0 35.0 37.0 35.0 37.0 8 34.66111158341126 37.0 35.0 37.0 33.0 37.0 9 36.96876067884534 39.0 37.0 39.0 33.0 39.0 10 36.872381442938085 39.0 37.0 39.0 32.0 39.0 11 36.79051710198849 39.0 37.0 39.0 32.0 39.0 12 36.44097026009292 39.0 35.0 39.0 32.0 39.0 13 36.33949351643021 39.0 35.0 39.0 32.0 39.0 14 37.394297559097254 40.0 35.0 41.0 32.0 41.0 15 37.558197102521916 40.0 35.0 41.0 32.0 41.0 16 37.60294781972359 40.0 35.0 41.0 33.0 41.0 17 37.4866986386087 39.0 35.0 41.0 32.0 41.0 18 37.43349485998523 39.0 36.0 41.0 32.0 41.0 19 37.388390751140605 39.0 35.0 41.0 32.0 41.0 20 37.288782649137104 39.0 35.0 41.0 32.0 41.0 21 37.18662412631417 39.0 35.0 41.0 32.0 41.0 22 37.10067411122835 39.0 35.0 41.0 32.0 41.0 23 37.02404896807973 39.0 35.0 41.0 32.0 41.0 24 36.88409920970293 39.0 35.0 41.0 31.0 41.0 25 36.75395856983069 38.0 35.0 41.0 31.0 41.0 26 36.64061653506162 38.0 35.0 41.0 31.0 41.0 27 36.550925902773955 38.0 35.0 41.0 31.0 41.0 28 36.57470232588377 38.0 35.0 41.0 31.0 41.0 29 36.52730283830165 38.0 35.0 41.0 31.0 41.0 30 36.47287469099068 38.0 35.0 40.0 31.0 41.0 31 36.375872018883115 38.0 35.0 40.0 30.0 41.0 32 36.31744321146323 38.0 35.0 41.0 30.0 41.0 33 36.206068167914374 38.0 35.0 41.0 30.0 41.0 34 36.07289036024277 38.0 35.0 41.0 30.0 41.0 35 35.96550514168171 38.0 35.0 41.0 29.0 41.0 36 35.83654553001245 38.0 35.0 41.0 29.0 41.0 37 35.802757454980075 38.0 35.0 41.0 29.0 41.0 38 35.70711167342611 38.0 35.0 40.0 29.0 41.0 39 35.6132978608137 38.0 35.0 40.0 28.0 41.0 40 35.44573771338938 38.0 34.0 40.0 27.0 41.0 41 35.34365837029777 38.0 34.0 40.0 27.0 41.0 42 35.27662981058541 38.0 34.0 40.0 27.0 41.0 43 35.191446588687135 37.0 34.0 40.0 27.0 41.0 44 35.08297452412982 37.0 34.0 40.0 27.0 41.0 45 34.95519760760526 37.0 34.0 40.0 26.0 41.0 46 34.877345595356566 37.0 34.0 40.0 26.0 41.0 47 34.7979466611991 37.0 34.0 40.0 26.0 41.0 48 34.71622817764931 36.0 34.0 40.0 26.0 41.0 49 34.63003062171925 36.0 34.0 40.0 26.0 41.0 50 34.52630100633271 36.0 34.0 40.0 26.0 41.0 51 34.16200506416892 35.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 1.0 11 5.0 12 2.0 13 2.0 14 18.0 15 38.0 16 106.0 17 262.0 18 540.0 19 1053.0 20 1772.0 21 2922.0 22 4232.0 23 6059.0 24 8639.0 25 12042.0 26 15910.0 27 18683.0 28 21101.0 29 24432.0 30 28707.0 31 34409.0 32 42668.0 33 54943.0 34 90961.0 35 132412.0 36 95409.0 37 124800.0 38 181222.0 39 296219.0 40 232.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.84083040368328 23.698243543518014 27.077051046756047 13.383875006042665 2 32.018949793382575 25.23416363700011 28.797001505248364 13.949885064368955 3 30.381679643807896 25.509709102001832 30.54970736838245 13.558903885807824 4 26.078886349581015 28.587383584958186 29.740157125925776 15.593572939535022 5 22.996294388574114 32.96443913245686 28.704652934400844 15.334613544568187 6 21.812765773019215 41.366908873297426 26.278502619598896 10.541822734084457 7 87.78406770450458 4.110178179399601 6.398472414615078 1.7072817014807444 8 85.031196814141 6.365133580374096 5.965234263653503 2.638435341831402 9 82.4910276862349 5.4712360872877355 8.528240493014682 3.5094957334626877 10 43.550102433568206 27.101638437008774 14.944215795606276 14.404043333816746 11 35.91909331706398 25.8105920810267 21.90236389004186 16.367950711867458 12 32.41143121948455 22.67765848031592 26.55254783705978 18.358362463139752 13 24.62597995335897 28.39501851138771 28.021373526631894 18.957628008621423 14 20.740422169657993 30.382013032150308 29.130139806401388 19.747424991790314 15 20.46395988671464 23.732249154443817 37.28356845546182 18.520222503379724 16 23.511546071768507 21.630068961378626 34.777071550139105 20.08131341671376 17 22.94520262509981 22.643319481047705 28.51637186802489 25.895106025827598 18 25.287589118871278 23.30851257124092 30.332171474960035 21.071726834927762 19 27.885184388757477 26.123060304950318 25.52629517203672 20.465460134255487 20 30.284913677423443 24.537632042620366 24.82801328885933 20.349440991096866 21 27.265748848560012 26.53596176702489 26.498038843075772 19.70025054133932 22 25.860516985302574 24.036799405235197 26.023210496398576 24.079473113063653 23 24.052301963157255 27.88726806589754 25.88743809395217 22.172991876993038 24 23.8368497468749 24.847183118547893 30.843089109703104 20.472878024874106 25 23.91236220643073 25.322428200653107 28.6861498813971 22.079059711519065 26 21.844270971376943 28.021290179546295 26.931527035294156 23.202911813782606 27 22.59972895527762 26.74532964605827 27.4824512711264 23.17249012753771 28 21.187579283915177 27.42569190583113 30.271911532069456 21.114817278184233 29 22.50646356648847 25.623227832592377 28.8761812365707 22.99412736434845 30 24.150651524168154 26.243746884902674 28.46678035209143 21.13882123883774 31 26.812840785396258 25.741163958719852 25.49929071630152 21.946704539582367 32 28.098636274985374 25.09572412781442 26.241246472334602 20.564393124865603 33 26.378602469407454 25.217910955307627 25.318844275972204 23.08464229931272 34 22.708663596160033 26.30217319191 28.044377322258175 22.944785889671795 35 22.64106910973644 26.50462326283837 28.988199719620404 21.86610790780479 36 26.852097262715013 27.168566146747548 25.335763734349502 20.643572856187937 37 23.23891775476287 29.31342004764119 26.356265450465994 21.09139674712994 38 23.628732074125562 29.052627016791106 25.538463846534675 21.780177062548653 39 23.64515144998925 27.838510020820102 25.476953697360067 23.039384831830585 40 25.6816541395997 24.998124690573945 26.729743741050605 22.59047742877575 41 21.21816766433128 25.32826249664528 27.104472237919257 26.349097601104184 42 23.520880945355984 26.31209149509669 25.81659307119008 24.350434488357244 43 22.382943185625628 25.264501976159398 27.45061268442626 24.90194215378871 44 22.565223261838202 26.41435836913091 27.67598320389531 23.34443516513558 45 21.87502604596425 27.57521657740194 25.87085202391728 24.678905352716534 46 23.204245367152247 27.453779873679157 26.5057067749512 22.836267984217397 47 23.20232838418339 26.231578210404717 27.526375185238898 23.039718220172993 48 23.351102931983778 25.442364656835043 28.545543347985753 22.660989063195426 49 23.292676624976455 24.91886161216601 28.536541862740684 23.251919900116853 50 22.071475126729243 27.135894089191382 27.967114573904695 22.82551621017468 51 21.477377100554925 27.458530657558498 26.372851520500884 24.691240721385697 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1103.0 1 1593.5 2 2084.0 3 6099.5 4 10115.0 5 7193.5 6 4272.0 7 4402.5 8 4533.0 9 4872.0 10 5211.0 11 5437.5 12 5664.0 13 5609.5 14 5555.0 15 5547.5 16 5540.0 17 5423.5 18 5307.0 19 5137.0 20 4967.0 21 4987.5 22 5008.0 23 5527.5 24 6047.0 25 6276.0 26 7940.5 27 9376.0 28 11281.0 29 13186.0 30 14631.0 31 16076.0 32 17596.5 33 19117.0 34 23312.5 35 27508.0 36 29495.5 37 31483.0 38 35783.0 39 40083.0 40 48590.0 41 57097.0 42 63301.5 43 69506.0 44 75336.5 45 81167.0 46 84092.0 47 87017.0 48 89714.5 49 92412.0 50 91150.5 51 89889.0 52 86364.0 53 82839.0 54 78037.0 55 73235.0 56 69082.5 57 64930.0 58 62840.5 59 60751.0 60 58316.5 61 55882.0 62 50826.0 63 45770.0 64 40695.5 65 35621.0 66 30073.5 67 24526.0 68 20951.0 69 17376.0 70 15012.0 71 12648.0 72 10324.5 73 8001.0 74 6902.5 75 4667.0 76 3530.0 77 2533.0 78 1536.0 79 1216.0 80 896.0 81 613.0 82 330.0 83 260.5 84 191.0 85 125.0 86 59.0 87 42.5 88 26.0 89 17.0 90 8.0 91 8.5 92 9.0 93 6.0 94 3.0 95 3.0 96 3.0 97 1.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1199802.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.44917975000627 #Duplication Level Percentage of deduplicated Percentage of total 1 76.07990165700372 20.122509942888907 2 6.369188784782673 3.3691963806088174 3 2.5505752896967175 2.023818729093384 4 1.6189160715204958 1.7127600870327842 5 1.1873372919492504 1.5702048729325697 6 0.9698410734351496 1.5390900528135179 7 0.7706282492463997 1.426773955932546 8 0.6840935074528438 1.4474969715546013 9 0.6248161365308194 1.4873286875227292 >10 8.435617055081071 51.85997836955646 >50 0.6691319528351328 10.914846235951767 >100 0.03735436588265282 1.6812193092144747 >500 0.002273744010233197 0.38042000619199323 >1k 0.0 0.0 >5k 3.248205728904567E-4 0.464356398705448 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5405 0.45049099768128414 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.029171479960860208 0.0 2 0.0 0.0 0.0 0.09534906592921165 0.0 3 0.0 0.0 0.0 0.1593596276718992 0.0 4 0.0 0.0 0.0 0.30279996199372894 0.0 5 0.0 0.0 0.0 0.5130013118831274 0.0 6 0.0 0.0 0.0 1.01600097349396 0.0 7 0.0 0.0 0.0 1.2578742159122922 0.0 8 0.0 0.0 0.0 1.9383198227707572 0.0 9 0.0 0.0 0.0 2.305713776106391 0.0 10 0.0 0.0 0.0 2.8253828548377147 0.0 11 0.0 0.0 0.0 3.2219482881342087 0.0 12 0.0 0.0 0.0 3.53975072553638 0.0 13 0.0 0.0 0.0 3.73269922870607 0.0 14 0.0 0.0 0.0 3.833382508113839 0.0 15 0.0 0.0 0.0 3.9138124457202106 0.0 16 0.0 0.0 0.0 4.055669185415594 0.0 17 0.0 0.0 0.0 4.204860468643993 0.0 18 0.0 0.0 0.0 4.40380996197706 0.0 19 0.0 0.0 0.0 4.508160513151337 0.0 20 0.0 0.0 0.0 4.622429367512306 0.0 21 0.0 0.0 0.0 4.760952223783591 0.0 22 0.0 0.0 0.0 4.916144497175368 0.0 23 0.0 0.0 0.0 5.0938404836798075 0.0 24 0.0 0.0 0.0 5.22994627446862 0.0 25 0.0 0.0 0.0 5.357467315440381 0.0 26 0.0 0.0 0.0 5.473653152770207 0.0 27 0.0 0.0 0.0 5.595256550664193 0.0 28 0.0 0.0 0.0 5.715193006846129 0.0 29 0.0 0.0 0.0 5.849298467580484 0.0 30 0.0 0.0 0.0 6.042663706178186 0.0 31 0.0 0.0 0.0 6.18660412301363 0.0 32 0.0 0.0 0.0 6.347797386568784 0.0 33 0.0 0.0 0.0 6.498822305680437 0.0 34 0.0 0.0 0.0 6.654014579072213 0.0 35 0.0 0.0 0.0 6.823625898273215 0.0 36 0.0 0.0 0.0 6.971733669388782 0.0 37 0.0 0.0 0.0 7.132760238772731 0.0 38 0.0 0.0 0.0 7.331376343763387 0.0 39 0.0 0.0 0.0 7.618590400749457 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATTACGC 20 7.03341E-4 45.000004 18 CATAGCG 35 1.2119926E-7 45.000004 1 CGTAGAC 20 7.03341E-4 45.000004 28 CGAATTA 20 7.03341E-4 45.000004 17 CGGTCTA 70 0.0 41.785717 31 TACGTAG 65 0.0 41.538464 1 CACGATA 50 1.0822987E-9 40.500004 22 CGTTTTT 3670 0.0 39.114445 1 TAAACGG 75 0.0 39.000004 2 CATGCGG 105 0.0 38.57143 2 CGTTCGA 70 0.0 38.57143 14 TCTAGCG 35 6.248518E-6 38.57143 1 AGGGCGA 1270 0.0 38.44488 6 GGGCGAT 2825 0.0 38.150444 7 GTTAGCG 65 9.094947E-12 38.076927 1 CGTTAGG 130 0.0 38.076927 2 GGCGATA 640 0.0 37.61719 8 TATGGGA 880 0.0 37.585228 4 TATAGCG 60 1.5643309E-10 37.500004 1 GTACGTC 30 1.1399516E-4 37.500004 16 >>END_MODULE