##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547115_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 917625 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.439605503337418 31.0 31.0 33.0 30.0 34.0 2 31.804763383735185 31.0 31.0 34.0 30.0 34.0 3 31.88678272714889 31.0 31.0 34.0 30.0 34.0 4 35.66621768151478 37.0 35.0 37.0 33.0 37.0 5 35.610735322163194 37.0 35.0 37.0 33.0 37.0 6 35.64846533169868 37.0 35.0 37.0 33.0 37.0 7 36.012541070698816 37.0 35.0 37.0 35.0 37.0 8 34.69538863914998 37.0 35.0 37.0 33.0 37.0 9 36.990644326386054 39.0 37.0 39.0 33.0 39.0 10 36.8926129955047 39.0 37.0 39.0 32.0 39.0 11 36.8033401443945 39.0 37.0 39.0 32.0 39.0 12 36.53643917722381 39.0 35.0 39.0 32.0 39.0 13 36.49132815692685 39.0 35.0 39.0 32.0 39.0 14 37.56627162511919 40.0 36.0 41.0 32.0 41.0 15 37.69081378558779 40.0 36.0 41.0 33.0 41.0 16 37.71172101893475 40.0 36.0 41.0 33.0 41.0 17 37.58331235526495 40.0 36.0 41.0 32.0 41.0 18 37.50130826862825 39.0 36.0 41.0 32.0 41.0 19 37.41169540934477 39.0 36.0 41.0 32.0 41.0 20 37.28822340280616 39.0 35.0 41.0 32.0 41.0 21 37.185069064160196 39.0 35.0 41.0 32.0 41.0 22 37.11157825909277 39.0 35.0 41.0 32.0 41.0 23 37.030327203378285 39.0 35.0 41.0 32.0 41.0 24 36.888186350633426 39.0 35.0 41.0 31.0 41.0 25 36.78599863778777 38.0 35.0 41.0 31.0 41.0 26 36.672396676202155 38.0 35.0 41.0 31.0 41.0 27 36.56709440130772 38.0 35.0 41.0 31.0 41.0 28 36.5877880397766 38.0 35.0 41.0 31.0 41.0 29 36.52471979294374 38.0 35.0 41.0 31.0 41.0 30 36.42558670480861 38.0 35.0 41.0 30.0 41.0 31 36.31726685737638 38.0 35.0 41.0 30.0 41.0 32 36.21184688734505 38.0 35.0 41.0 30.0 41.0 33 36.01975534668301 38.0 35.0 41.0 30.0 41.0 34 35.7799449666258 38.0 35.0 41.0 28.0 41.0 35 35.623055169595425 38.0 35.0 41.0 27.0 41.0 36 35.52130227489443 38.0 35.0 41.0 27.0 41.0 37 35.496601552921945 38.0 35.0 41.0 27.0 41.0 38 35.392436997684236 38.0 34.0 40.0 27.0 41.0 39 35.30211251873042 38.0 34.0 40.0 26.0 41.0 40 35.16141888026154 38.0 34.0 40.0 26.0 41.0 41 35.05986759297099 38.0 34.0 40.0 25.0 41.0 42 35.00203895926985 38.0 34.0 40.0 25.0 41.0 43 34.897047268764474 37.0 34.0 40.0 24.0 41.0 44 34.7685971938428 37.0 34.0 40.0 24.0 41.0 45 34.638549516414656 37.0 34.0 40.0 24.0 41.0 46 34.53918103800572 37.0 34.0 40.0 23.0 41.0 47 34.46920474049857 36.0 34.0 40.0 23.0 41.0 48 34.39234654679199 36.0 34.0 40.0 23.0 41.0 49 34.30992289878763 36.0 33.0 40.0 24.0 41.0 50 34.19720365072878 36.0 33.0 40.0 24.0 41.0 51 33.85151668709985 35.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 5.0 11 1.0 12 3.0 13 4.0 14 12.0 15 25.0 16 73.0 17 201.0 18 409.0 19 824.0 20 1364.0 21 2207.0 22 3364.0 23 4971.0 24 7100.0 25 10864.0 26 14487.0 27 17115.0 28 18425.0 29 19598.0 30 22451.0 31 26492.0 32 32360.0 33 41412.0 34 66805.0 35 89824.0 36 75611.0 37 97317.0 38 139201.0 39 224948.0 40 150.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.43092221768151 22.642909685328974 25.68729055986923 16.238877537120285 2 34.17027652908323 24.788884348181448 27.23966762021523 13.801171502520093 3 30.060318757662447 25.236561776324752 31.357253780138944 13.345865685873859 4 25.815992371611497 28.043808745402533 30.917858602370252 15.22234028061572 5 23.1630568042501 31.364010352812972 30.444462607274215 15.028470235662716 6 21.87745538754938 40.141888026154476 27.909331153793758 10.071325432502384 7 86.31488897970304 3.537501702765291 8.507832720337829 1.6397765971938427 8 83.7691867592971 5.767606593107206 8.192235390273805 2.2709712573218908 9 80.7228442991418 5.153412341642828 10.628851655087862 3.494891704127503 10 41.17629750715162 29.110693366026425 16.62029696226672 13.092712164555238 11 33.32821141533851 25.467157063070427 25.09805203650729 16.106579485083778 12 29.322762566407846 22.72180901784498 29.175207737365483 18.780220678381692 13 24.937637923988557 25.61830813240703 30.845061980656585 18.598991962947828 14 21.65263588067021 26.74447622939654 32.09426508650048 19.50862280343277 15 21.479689415610952 22.843100395041546 36.08947009944149 19.58774008990601 16 25.009998637787767 22.27227898106525 33.867538482495576 18.85018389865141 17 24.562103255687237 22.369704399945512 30.602697180220677 22.465495164146574 18 25.98348998774009 22.00016346546792 31.23432774826318 20.78201879852881 19 27.271924805884755 25.45113744721428 27.509821550197522 19.767116196703448 20 29.30369159515052 24.884130227489443 26.54809971393543 19.264078463424603 21 27.50012259910094 25.19297098487944 28.654733687508514 18.6521727285111 22 26.39367933524043 22.410461789946872 28.814058030241114 22.381800844571583 23 24.628143304726876 25.69295736275712 28.524070290151204 21.1548290423648 24 24.07868137855878 24.005121917994824 31.818335376651678 20.097861326794714 25 24.966516823321072 24.625745811197387 29.176188530173004 21.23154883530854 26 22.483585342596378 25.992099169050537 28.586623075875224 22.937692412477865 27 22.235117831358124 24.24781364936657 30.172782999591334 23.344285519683964 28 21.51423511783136 26.33123552649503 30.463424601552923 21.69110475412069 29 23.229968669118648 24.975997820460428 29.772946465059256 22.021087045361668 30 24.435689960495846 24.646778368069747 30.35259501430323 20.56493665713118 31 26.354011715025198 24.97512600463152 27.72428824410843 20.946574036234843 32 27.141479362484677 24.871597874948918 26.997956681651004 20.988966080915404 33 26.217572537801388 25.134668301321344 26.48750851382645 22.160250647050812 34 23.3593243427326 26.910775098760386 29.148508377605232 20.581392180901783 35 22.800272442446534 27.706524996594467 28.689061435771695 20.804141125187304 36 25.10317395450211 28.831385369840625 26.0114970712437 20.05394360441357 37 23.70957635199564 28.82441084320937 25.979348862552786 21.486663942242203 38 23.816809698951097 28.770031330881352 26.433782863370116 20.97937610679744 39 23.7461926168097 27.266149026018255 25.71268219588612 23.274976161285927 40 25.009671706851925 25.779267129818827 27.032066475956956 22.178994687372292 41 21.467810924942107 25.879852881078875 27.895926985424328 24.756409208554693 42 23.49946873722926 26.55518321754529 26.157308268628256 23.788039776597195 43 23.045252690369157 25.173573082686286 27.850156654406753 23.9310175725378 44 23.11990192071925 25.93194387685601 27.67786405121918 23.270290151205558 45 22.78414384961177 26.088107887208828 26.843318348998775 24.28442991418063 46 23.553957226535893 26.551478000272443 27.34232393406893 22.552240839122735 47 22.511265495164146 26.46277073968124 28.637624301866232 22.388339463288382 48 23.218199155428415 25.645116469145897 28.881514780002725 22.255169595422966 49 23.787494891704128 25.459092766653047 28.061898923852336 22.691513417790492 50 22.003105843890477 26.730636153112652 29.088897970303773 22.177360032693095 51 22.329709848794444 26.476174908050677 27.68156926849203 23.512545974662853 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 642.0 1 1148.0 2 1654.0 3 8118.5 4 14583.0 5 9821.5 6 5060.0 7 4997.0 8 4934.0 9 5103.5 10 5273.0 11 5263.0 12 5253.0 13 5288.5 14 5324.0 15 5264.0 16 5204.0 17 4997.5 18 4791.0 19 4768.0 20 4745.0 21 4609.0 22 4473.0 23 4662.5 24 4852.0 25 5425.5 26 6735.5 27 7472.0 28 8863.5 29 10255.0 30 11616.5 31 12978.0 32 15489.0 33 18000.0 34 19557.5 35 21115.0 36 23263.0 37 25411.0 38 28354.0 39 31297.0 40 35588.5 41 39880.0 42 43699.0 43 47518.0 44 50163.0 45 52808.0 46 56109.5 47 59411.0 48 62493.5 49 65576.0 50 65609.5 51 65643.0 52 63196.5 53 60750.0 54 58646.0 55 56542.0 56 53923.5 57 51305.0 58 49303.5 59 47302.0 60 45503.0 61 43704.0 62 39895.5 63 36087.0 64 32507.0 65 28927.0 66 24719.5 67 20512.0 68 17549.0 69 14586.0 70 12464.0 71 10342.0 72 8375.0 73 6408.0 74 5793.0 75 4213.5 76 3249.0 77 2410.0 78 1571.0 79 1045.5 80 520.0 81 412.0 82 304.0 83 202.5 84 101.0 85 77.5 86 54.0 87 38.5 88 23.0 89 12.5 90 2.0 91 3.0 92 4.0 93 3.0 94 2.0 95 1.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 917625.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.15546125741445 #Duplication Level Percentage of deduplicated Percentage of total 1 70.8883327437434 22.79447037144146 2 6.948468818608785 4.468624397902544 3 3.566990849449006 3.4409470819502816 4 2.5143754190434566 3.234036054945884 5 2.0194389279247384 3.246799510429926 6 1.6434193365266685 3.1706944083221438 7 1.4149313927883609 3.184844010789393 8 1.2258928902663546 3.153532107095968 9 1.049697879482091 3.0378167546108834 >10 8.649148128276472 46.76349296514547 >50 0.056695156411174286 1.1959486189253976 >100 0.021912812634013807 1.3189751645393422 >500 3.478224227613825E-4 0.05793514247693979 >1k 0.0 0.0 >5k 3.478224227613825E-4 0.9318834114244448 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8332 0.9079961858057486 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.026699359760250646 0.0 2 0.0 0.0 0.0 0.08521999727557554 0.0 3 0.0 0.0 0.0 0.1502792535076965 0.0 4 0.0 0.0 0.0 0.25446124506198065 0.0 5 0.0 0.0 0.0 0.4328565590519003 0.0 6 0.0 0.0 0.0 0.875630023157608 0.0 7 0.0 0.0 0.0 1.1152703991281843 0.0 8 0.0 0.0 0.0 1.6632066475956955 0.0 9 0.0 0.0 0.0 2.0180356899604956 0.0 10 0.0 0.0 0.0 2.4503473641193296 0.0 11 0.0 0.0 0.0 2.743386459610407 0.0 12 0.0 0.0 0.0 2.9833537665168235 0.0 13 0.0 0.0 0.0 3.1285111020296963 0.0 14 0.0 0.0 0.0 3.2286609453752892 0.0 15 0.0 0.0 0.0 3.2990600735594606 0.0 16 0.0 0.0 0.0 3.3977932161830813 0.0 17 0.0 0.0 0.0 3.49946873722926 0.0 18 0.0 0.0 0.0 3.6419016482768014 0.0 19 0.0 0.0 0.0 3.7288652772101893 0.0 20 0.0 0.0 0.0 3.82727148889797 0.0 21 0.0 0.0 0.0 3.9480179812014713 0.0 22 0.0 0.0 0.0 4.078899332516006 0.0 23 0.0 0.0 0.0 4.215229532761204 0.0 24 0.0 0.0 0.0 4.337937610679744 0.0 25 0.0 0.0 0.0 4.446369704399945 0.0 26 0.0 0.0 0.0 4.545865685873859 0.0 27 0.0 0.0 0.0 4.654406756572674 0.0 28 0.0 0.0 0.0 4.767415883394633 0.0 29 0.0 0.0 0.0 4.89437406347909 0.0 30 0.0 0.0 0.0 5.0554420378695 0.0 31 0.0 0.0 0.0 5.179021931616946 0.0 32 0.0 0.0 0.0 5.347064432638605 0.0 33 1.0897697861326794E-4 0.0 0.0 5.490042228579212 0.0 34 1.0897697861326794E-4 0.0 0.0 5.63334695545566 0.0 35 1.0897697861326794E-4 0.0 0.0 5.785369840621168 0.0 36 1.0897697861326794E-4 0.0 0.0 5.927584797711483 0.0 37 1.0897697861326794E-4 0.0 0.0 6.074812695818008 0.0 38 1.0897697861326794E-4 0.0 0.0 6.268682740771012 0.0 39 1.0897697861326794E-4 0.0 0.0 6.567715570085819 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATACGG 30 2.1650212E-6 45.000004 2 TAATGCG 30 2.1650212E-6 45.000004 1 CGTTTTT 5130 0.0 40.921055 1 TCACGAC 90 0.0 40.0 25 ATACCGG 45 1.927583E-8 40.0 2 GCGAGAC 790 0.0 38.449364 21 AGGGCGA 1110 0.0 38.10811 6 TCAAGCG 800 0.0 37.96875 17 CACGACC 795 0.0 37.92453 27 ACGACCA 795 0.0 37.64151 28 AAGGGCG 425 0.0 37.588234 5 CGAGACA 815 0.0 37.54601 22 GCGAATA 30 1.1397424E-4 37.500004 25 ACGGGAT 240 0.0 37.500004 5 GCGATGT 240 0.0 37.500004 9 TTACGAG 60 1.546141E-10 37.500004 1 CGGTCTA 90 0.0 37.5 31 ACACGAC 805 0.0 37.45342 26 GACACGA 810 0.0 37.22222 25 GGGCGAT 2265 0.0 37.152317 7 >>END_MODULE