##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547113_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1464355 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.521987496201398 31.0 31.0 33.0 30.0 34.0 2 31.881637307893236 31.0 31.0 34.0 30.0 34.0 3 31.779351318498588 31.0 31.0 34.0 30.0 34.0 4 35.66371610709152 37.0 35.0 37.0 33.0 37.0 5 35.64921620781846 37.0 35.0 37.0 33.0 37.0 6 35.713551017342105 37.0 35.0 37.0 33.0 37.0 7 36.09715198841811 37.0 35.0 37.0 35.0 37.0 8 34.80351622386648 37.0 35.0 37.0 35.0 37.0 9 37.130253934326035 39.0 37.0 39.0 34.0 39.0 10 37.00915078652376 39.0 37.0 39.0 32.0 39.0 11 36.93288580979339 39.0 37.0 39.0 33.0 39.0 12 36.78388027493333 39.0 35.0 39.0 33.0 39.0 13 36.76605877673105 39.0 35.0 39.0 33.0 39.0 14 37.94112561503187 40.0 37.0 41.0 33.0 41.0 15 38.060834975125566 40.0 37.0 41.0 33.0 41.0 16 38.068375496378955 40.0 36.0 41.0 33.0 41.0 17 37.963059504013714 40.0 36.0 41.0 33.0 41.0 18 37.73048816714526 39.0 36.0 41.0 33.0 41.0 19 37.52057185586828 39.0 36.0 41.0 33.0 41.0 20 37.226459430944 39.0 35.0 41.0 33.0 41.0 21 37.162868976443555 39.0 35.0 41.0 33.0 41.0 22 37.07767378811832 38.0 35.0 41.0 32.0 41.0 23 37.00328677130887 38.0 35.0 41.0 32.0 41.0 24 36.845529260322806 38.0 35.0 41.0 32.0 41.0 25 36.76127714932513 38.0 35.0 41.0 32.0 41.0 26 36.66489683171089 38.0 35.0 40.0 32.0 41.0 27 36.549566191258265 38.0 35.0 40.0 31.0 41.0 28 36.523713170645095 38.0 35.0 40.0 31.0 41.0 29 36.45608544376193 38.0 35.0 40.0 31.0 41.0 30 36.317265963512945 38.0 35.0 40.0 31.0 41.0 31 36.089571859282756 38.0 35.0 40.0 30.0 41.0 32 35.698726743173616 38.0 35.0 40.0 29.0 41.0 33 35.1887779944071 38.0 35.0 41.0 24.0 41.0 34 34.66369971762312 38.0 34.0 41.0 21.0 41.0 35 34.302273697293344 38.0 34.0 41.0 18.0 41.0 36 34.09961792051791 38.0 34.0 40.0 18.0 41.0 37 34.0049154747312 38.0 34.0 40.0 16.0 41.0 38 33.88130200668554 38.0 33.0 40.0 15.0 41.0 39 33.775197954048025 38.0 33.0 40.0 15.0 41.0 40 33.667584704528615 38.0 33.0 40.0 15.0 41.0 41 33.571194143496626 37.0 33.0 40.0 15.0 41.0 42 33.49818657361091 37.0 33.0 40.0 15.0 41.0 43 33.423590591079346 37.0 33.0 40.0 13.0 41.0 44 33.312883146504774 37.0 33.0 40.0 12.0 41.0 45 33.22437455398452 37.0 33.0 40.0 12.0 41.0 46 33.17128974872896 37.0 33.0 40.0 11.0 41.0 47 33.11604016785547 37.0 33.0 40.0 11.0 41.0 48 33.025384554974714 36.0 33.0 40.0 10.0 41.0 49 32.95799242669981 36.0 33.0 40.0 10.0 41.0 50 32.87470251407616 36.0 32.0 40.0 10.0 41.0 51 32.54474700465393 36.0 32.0 40.0 10.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 2.0 11 0.0 12 4.0 13 2.0 14 16.0 15 41.0 16 110.0 17 282.0 18 700.0 19 1467.0 20 2684.0 21 4161.0 22 6640.0 23 10860.0 24 17085.0 25 29856.0 26 42753.0 27 44816.0 28 39218.0 29 34924.0 30 34909.0 31 39200.0 32 47003.0 33 59346.0 34 92943.0 35 137990.0 36 114821.0 37 139898.0 38 200364.0 39 361985.0 40 274.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.043199907126347 22.82609066790498 25.881292446162302 23.24941697880637 2 39.909448187085786 23.126564255252312 25.26723369674703 11.696753860914875 3 25.257536594609913 22.977078645547017 39.258513133768794 12.506871626074279 4 22.114787739311847 25.237459495818975 39.508384237428764 13.139368527440409 5 20.10298049311813 29.134192187003833 38.200982685209524 12.561844634668507 6 18.46915536191702 36.67724015010022 35.188256945890856 9.665347542091911 7 78.40462183008901 2.8888486739895725 16.955792823461525 1.7507366724598885 8 76.49538534030341 5.301310133130286 16.170327550354934 2.0329769762113696 9 73.78347463559042 4.730068869912009 18.518460346022653 2.967996148474926 10 35.53298209792025 26.29000481440634 26.07216146357953 12.104851624093884 11 26.89149830471436 24.23913600185747 33.56003154972667 15.309334143701491 12 23.90308361019015 21.44910216443417 37.5800267011756 17.067787524200075 13 20.478504187850625 25.142878605256243 38.50623653417375 15.872380672719387 14 17.94373632076921 27.835804842405015 38.06645246541993 16.154006371405842 15 17.322302310573598 24.09320144363901 43.12690570251066 15.457590543276734 16 19.503603975811874 22.78723396990484 41.79191521181681 15.91724684246648 17 19.54642146200887 23.173683976904506 36.87992324265632 20.3999713184303 18 20.458358799608018 23.82332153063977 38.336673825677515 17.381645844074693 19 22.23006033373055 26.00448661697471 34.76329168814939 17.00216136114535 20 23.22572053907693 24.895397632404713 34.39534812255225 17.48353370596611 21 21.69494419044562 25.919329670742407 35.78353609609692 16.60219004271505 22 21.07364675915335 23.682850128554893 36.1223883552827 19.121114757009057 23 19.13060699079117 26.347163085454007 35.20888036029515 19.31334956345968 24 19.499984634873375 24.853263040724414 38.51914324053935 17.12760908386286 25 19.50176016061679 25.61387095342318 36.6804497543287 18.203919131631334 26 18.164106381307814 27.82521997739619 35.289666781620575 18.72100685967542 27 18.16875006402136 26.49337080147915 36.314213425023304 19.023665709476187 28 17.88050028852293 26.111018161579675 38.46478483701015 17.543696712887243 29 18.870902206090737 24.40658173735194 37.79165571190046 18.930860344656864 30 19.18708236732213 25.465341396041257 37.740302044244736 17.607274192391873 31 21.28336366523145 25.297690792191784 35.31828006187025 18.100665480706525 32 22.398871858258413 25.713232105602806 34.683734476954015 17.20416155918476 33 21.653833940540373 25.75092788292456 34.16029582990463 18.43494234663043 34 19.463381488778335 27.078543112838076 34.03034100337691 19.427734395006677 35 19.678151814280007 27.846184839058836 33.29978044941288 19.175882897248275 36 23.018530342710612 28.054194508845193 30.265680111721544 18.66159503672265 37 21.845795589184316 29.029436168142286 30.940311604767967 18.184456637905427 38 21.602685141239657 29.509852460639667 29.797897367783083 19.08956503033759 39 21.07569544270344 29.307647394245244 29.478917339033227 20.137739824018084 40 22.142991282851494 27.210819780722574 30.33151114313128 20.31467779329466 41 20.230886636095754 27.143486381376103 30.619351181919686 22.00627580060846 42 20.79796224276217 28.838567150725066 29.24905504471252 21.114415561800246 43 20.691840434867228 27.73965329445387 31.001703821819167 20.566802448859736 44 21.034721771701534 28.625982087676828 30.18236698068433 20.15692915993731 45 19.784205332723282 29.339538568175065 29.57240559836925 21.303850500732405 46 21.226137104732118 29.191009010793145 29.0905552273868 20.492298657087932 47 20.666778206104393 27.917957052763843 30.893874777632472 20.52138996349929 48 21.154979496092135 26.688610343803244 31.560243247026847 20.59616691307777 49 20.91514694182763 26.365669526856532 31.23047348491315 21.48871004640268 50 19.605082100993272 27.822488399329398 31.711367803572223 20.86106169610511 51 19.15983487610586 28.61669472224973 30.593401190285142 21.630069211359267 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1287.0 1 1720.0 2 2153.0 3 25057.5 4 47962.0 5 32836.0 6 17710.0 7 18013.5 8 18317.0 9 19693.5 10 21070.0 11 21984.0 12 22898.0 13 23181.0 14 23464.0 15 22547.0 16 21630.0 17 20476.5 18 19323.0 19 18192.0 20 17061.0 21 15947.0 22 14833.0 23 14868.0 24 14903.0 25 14764.0 26 16055.5 27 17486.0 28 18977.5 29 20469.0 30 22761.0 31 25053.0 32 28525.0 33 31997.0 34 35810.5 35 39624.0 36 43566.0 37 47508.0 38 53281.5 39 59055.0 40 65205.0 41 71355.0 42 79137.5 43 86920.0 44 92515.0 45 98110.0 46 105222.5 47 112335.0 48 112798.0 49 113261.0 50 105937.5 51 98614.0 52 90576.5 53 82539.0 54 75240.0 55 67941.0 56 61908.0 57 55875.0 58 51504.5 59 47134.0 60 43577.5 61 40021.0 62 34712.5 63 29404.0 64 25921.5 65 22439.0 66 18292.0 67 14145.0 68 11764.0 69 9383.0 70 8024.5 71 6666.0 72 5404.0 73 4142.0 74 3435.0 75 2118.0 76 1508.0 77 1082.0 78 656.0 79 529.0 80 402.0 81 295.0 82 188.0 83 149.5 84 111.0 85 64.5 86 18.0 87 19.5 88 21.0 89 12.5 90 4.0 91 3.5 92 3.0 93 3.0 94 3.0 95 2.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1464355.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.620750314453204 #Duplication Level Percentage of deduplicated Percentage of total 1 75.80677808003269 27.76101092212041 2 7.847571183036579 5.747678897377614 3 3.568962834652628 3.92094290548131 4 2.225110271444339 3.2594083069075324 5 1.4893295552031984 2.727018288851599 6 1.158090116316467 2.5446077394756843 7 0.9296230924768587 2.3830446609301417 8 0.7709716546274997 2.2586848370907613 9 0.6497788552811351 2.1415850296975503 >10 5.364480377395668 38.85892918646686 >50 0.16518666719886846 3.813456991091435 >100 0.021629021492907158 1.3816373822135926 >500 0.0011484419266788023 0.28479466484701976 >1k 0.0011484419266788023 0.8042663018593907 >5k 0.0 0.0 >10k+ 1.914069877798004E-4 2.1129338855891127 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 30144 2.058517231135893 No Hit CGTTTCTGTCTCTTATACACATCTGACGCTTGTCAGGTCGTATGCCGTCTT 3073 0.20985348498144232 No Hit CGTTCTGTCTCTTATACACATCTGACGCTTGTCAGGTCGTATGCCGTCTTC 2505 0.17106507643296878 No Hit CGCTGTCTCTTATACACATCTGACGCTTGTCAGGTCGTATGCCGTCTTCTG 1811 0.12367219697409439 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCTTGTCAGGTCGTATGCCGTCT 1756 0.11991627713225277 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.033871568028244516 0.0 2 0.0 0.0 0.0 0.1702456030129306 0.0 3 0.0 0.0 0.0 0.3884304010980944 0.0 4 0.0 0.0 0.0 0.5734265256717122 0.0 5 0.0 0.0 0.0 1.0156690146856466 0.0 6 0.0 0.0 0.0 1.9215968805378478 0.0 7 0.0 0.0 0.0 2.408432381492193 0.0 8 0.0 0.0 0.0 3.151148457853458 0.0 9 0.0 0.0 0.0 3.631701329254177 0.0 10 0.0 0.0 0.0 4.234560608595594 0.0 11 0.0 0.0 0.0 4.677690860481236 0.0 12 0.0 0.0 0.0 5.047136794015112 0.0 13 0.0 0.0 0.0 5.29967118629021 0.0 14 0.0 0.0 0.0 5.443420482055239 0.0 15 0.0 0.0 0.0 5.5482447903684555 0.0 16 0.0 0.0 0.0 5.70319355620734 0.0 17 0.0 0.0 0.0 5.871185607315166 0.0 18 0.0 0.0 0.0 6.119895790296752 0.0 19 0.0 0.0 0.0 6.2561332463780985 0.0 20 0.0 0.0 0.0 6.398311884754722 0.0 21 0.0 0.0 0.0 6.557562886048807 0.0 22 0.0 0.0 0.0 6.737027565037167 0.0 23 0.0 0.0 0.0 6.938891184173237 0.0 24 0.0 0.0 0.0 7.107361261442751 0.0 25 0.0 0.0 0.0 7.249676478722714 0.0 26 0.0 0.0 0.0 7.395611036941179 0.0 27 0.0 0.0 0.0 7.5606666416272015 0.0 28 0.0 0.0 0.0 7.707693831072383 0.0 29 0.0 0.0 0.0 7.879168644215372 0.0 30 0.0 0.0 0.0 8.118318303963179 0.0 31 0.0 0.0 0.0 8.29293443188298 0.0 32 0.0 0.0 0.0 8.474584373324774 0.0 33 0.0 0.0 0.0 8.659307340091713 0.0 34 0.0 0.0 0.0 8.85338596173742 0.0 35 0.0 0.0 0.0 9.051971687193337 0.0 36 0.0 0.0 0.0 9.250352544294246 0.0 37 0.0 0.0 0.0 9.452352742333655 0.0 38 0.0 0.0 0.0 9.674156881357321 0.0 39 0.0 0.0 0.0 9.923276801048926 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AATCGCG 30 2.1659125E-6 44.999996 1 CGTTTTT 20325 0.0 44.02583 1 GCGTAAG 90 0.0 42.5 1 ACGGGTA 160 0.0 40.78125 5 TATACGG 110 0.0 38.863632 2 GTTTTTT 22775 0.0 38.400658 2 GCGAGAC 165 0.0 38.181816 21 GCGATAC 95 0.0 37.894737 9 AGGGTAC 685 0.0 37.445255 6 AGGGCGA 1595 0.0 37.382446 6 GGGCGAT 2895 0.0 37.07254 7 GGCGATT 820 0.0 36.76829 8 CCTCGTC 215 0.0 36.627907 36 TAGGGAC 1070 0.0 36.588783 5 TGGGCGA 745 0.0 36.543625 6 GCGATTG 420 0.0 36.42857 9 TTAGGGA 1375 0.0 36.32727 4 GGCACCG 685 0.0 36.131386 8 TAATACG 25 0.0021072968 36.0 1 CGTAAGA 25 0.0021072968 36.0 27 >>END_MODULE